FFCP PHASE1:Mm9::chr19:46378880..46378896,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=18034|HGNC=|MCL_coexpression_id=318|UniProt=Q9WTK5,Q3UG25,Q3UV15|association_with_transcript=-330bp_to_ENSMUST00000073116,NM_001177369,uc008hst.2,uc008hsu.2_5end|description=CAGE_peak_8_at_Nfkb2_5end|id=chr19:46378880..46378896,+|ontology_enrichment_celltype=CL:0000988!2.57e-10!32;CL:0002032!2.57e-10!32;CL:0000037!2.57e-10!32;CL:0000566!2.57e-10!32;CL:0000837!2.57e-10!32;CL:0000791!1.44e-09!9;CL:0000789!1.44e-09!9;CL:0002420!1.44e-09!9;CL:0002419!1.44e-09!9;CL:0000790!1.44e-09!9;CL:0000838!1.86e-09!12;CL:0000084!1.36e-08!11;CL:0000827!1.36e-08!11;CL:0000624!1.40e-08!8;CL:0000542!1.80e-08!13;CL:0000051!1.80e-08!13;CL:0002320!6.77e-07!46;CL:0000134!6.77e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,1.23e-24,9;CL:0000789,1.23e-24,9;CL:0002420,1.23e-24,9;CL:0002419,1.23e-24,9;CL:0000790,1.23e-24,9;CL:0000624,9.44e-21,8;CL:0000084,4.79e-20,11;CL:0000827,4.79e-20,11;CL:0000838,2.54e-18,12;CL:0000542,7.32e-17,13;CL:0000051,7.32e-17,13;CL:0000988,5.03e-13,32;CL:0002032,5.03e-13,32;CL:0000037,5.03e-13,32;CL:0000837,5.03e-13,32;CL:0000738,9.82e-13,17;CL:0002087,9.82e-13,17;CL:0000893,1.47e-12,6;CL:0002489,1.47e-12,6;CL:0000898,1.47e-12,6;CL:0000809,1.47e-12,6;CL:0000810,1.47e-12,6;CL:0000895,1.47e-12,6;CL:0000808,1.47e-12,6;CL:0000894,1.47e-12,6;CL:0000806,1.47e-12,6;CL:0000807,1.47e-12,6;CL:0000805,1.47e-12,6;CL:0002425,1.47e-12,6;CL:0002436,1.47e-12,6;CL:0002427,1.47e-12,6;CL:0002428,1.47e-12,6;CL:0002429,1.47e-12,6;CL:0002433,1.47e-12,6;CL:0002431,1.47e-12,6;CL:0002432,1.47e-12,6;CL:0002031,6.18e-11,25;CL:0002320,1.35e-10,46;CL:0000134,1.35e-10,46;CL:0000219,8.88e-09,54;CL:0000034,1.79e-08,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.90e-09!45;UBERON:0003061!1.90e-09!45;UBERON:0002193!2.61e-09!48;UBERON:0004177!1.16e-07!29;UBERON:0002384!6.77e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.35e-10,46|phase1_expression=0,0,0.454999239389536,0,0,0,0.700837921786577,2.58246646883153,2.956563165185,3.5109678948299,0.171217968225505,0.159544317990673,1.54080656938085,1.31130603628496,0,0.202475267389826,0,0.788655413395594,0.548457734422955,1.69755860719212,0.17008658030214,0.0992909512008853,0,0,0.45881856213434,0,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,4.70585190424811,6.14740936462601,1.94204141212461,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0.671130424230945,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,4.34796733052517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0.958520996047362,2.99951365496704,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0.702213187313235,1.02939162845886,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,2.20971958992012,3.07893195112048,1.52019971184866,0,0,0,0,0,0,0,0,0,0,4.34937519160848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.389762468933385,0.358053391334963,0,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0,0,0.288635524920988,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p8@Nfkb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18034 | |||
|HGNC= | |||
|MCL_coexpression_id=318 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9WTK5,uniprot:Q3UG25,uniprot:Q3UV15 | |||
|association_with_transcript=-330bp_to_ENSMUST00000073116,NM_001177369,uc008hst.2,uc008hsu.2_5end | |||
|cluster_id=chr19:46378880..46378896,+ | |||
|description=CAGE_peak_8_at_Nfkb2_5end | |||
|id=chr19:46378880..46378896,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.57e-10!32;CL:0002032!2.57e-10!32;CL:0000037!2.57e-10!32;CL:0000566!2.57e-10!32;CL:0000837!2.57e-10!32;CL:0000791!1.44e-09!9;CL:0000789!1.44e-09!9;CL:0002420!1.44e-09!9;CL:0002419!1.44e-09!9;CL:0000790!1.44e-09!9;CL:0000838!1.86e-09!12;CL:0000084!1.36e-08!11;CL:0000827!1.36e-08!11;CL:0000624!1.40e-08!8;CL:0000542!1.80e-08!13;CL:0000051!1.80e-08!13;CL:0002320!6.77e-07!46;CL:0000134!6.77e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.23e-24,9;CL:0000789,1.23e-24,9;CL:0002420,1.23e-24,9;CL:0002419,1.23e-24,9;CL:0000790,1.23e-24,9;CL:0000624,9.44e-21,8;CL:0000084,4.79e-20,11;CL:0000827,4.79e-20,11;CL:0000838,2.54e-18,12;CL:0000542,7.32e-17,13;CL:0000051,7.32e-17,13;CL:0000988,5.03e-13,32;CL:0002032,5.03e-13,32;CL:0000037,5.03e-13,32;CL:0000837,5.03e-13,32;CL:0000738,9.82e-13,17;CL:0002087,9.82e-13,17;CL:0000893,1.47e-12,6;CL:0002489,1.47e-12,6;CL:0000898,1.47e-12,6;CL:0000809,1.47e-12,6;CL:0000810,1.47e-12,6;CL:0000895,1.47e-12,6;CL:0000808,1.47e-12,6;CL:0000894,1.47e-12,6;CL:0000806,1.47e-12,6;CL:0000807,1.47e-12,6;CL:0000805,1.47e-12,6;CL:0002425,1.47e-12,6;CL:0002436,1.47e-12,6;CL:0002427,1.47e-12,6;CL:0002428,1.47e-12,6;CL:0002429,1.47e-12,6;CL:0002433,1.47e-12,6;CL:0002431,1.47e-12,6;CL:0002432,1.47e-12,6;CL:0002031,6.18e-11,25;CL:0002320,1.35e-10,46;CL:0000134,1.35e-10,46;CL:0000219,8.88e-09,54;CL:0000034,1.79e-08,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-09!45;UBERON:0003061!1.90e-09!45;UBERON:0002193!2.61e-09!48;UBERON:0004177!1.16e-07!29;UBERON:0002384!6.77e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.35e-10,46 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0.700837921786577,2.58246646883153,2.956563165185,3.5109678948299,0.171217968225505,0.159544317990673,1.54080656938085,1.31130603628496,0,0.202475267389826,0,0.788655413395594,0.548457734422955,1.69755860719212,0.17008658030214,0.0992909512008853,0,0,0.45881856213434,0,0.430761996159075,0.430942465371778,0,0,0.665191531965914,0,0,0,0,0,0,1.67412652294763,0.7813353445238,0.523523743973798,4.70585190424811,6.14740936462601,1.94204141212461,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0,0,0.139986421625363,0,0.671130424230945,4.35217285206807,1.34437519656986,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,4.34796733052517,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0.209446706813455,0,0.958520996047362,2.99951365496704,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0.702213187313235,1.02939162845886,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0.438599962275997,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.655453258862952,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,2.20971958992012,3.07893195112048,1.52019971184866,0,0,0,0,0,0,0,0,0,0,4.34937519160848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.389762468933385,0.358053391334963,0,0.120195449519969,0.147689527174577,0.302899349844443,0.15241361331,0,0,0.288635524920988,0.350630706544707,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0,0.177475806159338,0,0.290692833264657,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p8@Nfkb2 | |||
}} |
Revision as of 05:23, 4 August 2015
Short description: | p8@Nfkb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Nfkb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:318 |
Association with transcript: | -330bp_to_ENSMUST00000073116, NM_001177369, uc008hst.2, uc008hsu.2_5end |
EntrezGene: | 18034 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.35e-10 | 46 |