FFCP PHASE1:Mm9::chr14:35487338..35487391,+: Difference between revisions
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{{FFCP|EntrezGene=218914|HGNC=|MCL_coexpression_id=36|UniProt=Q65Z40|association_with_transcript=30bp_to_ENSMUST00000169910_5end|description=CAGE_peak_4_at_Wapal_5end|id=chr14:35487338..35487391,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!3.05e-11!70;UBERON:0005911!1.35e-10!69;UBERON:0003929!3.07e-10!55;UBERON:0000490!6.07e-10!66;UBERON:0005057!1.16e-09!51;UBERON:0002193!2.88e-08!48;UBERON:0004119!7.05e-08!130;UBERON:0000925!7.05e-08!130;UBERON:0006595!7.05e-08!130;UBERON:0001007!9.76e-08!128;UBERON:0001555!9.76e-08!128;UBERON:0007026!9.76e-08!128;UBERON:0002390!1.62e-07!45;UBERON:0003061!1.62e-07!45;UBERON:0004921!2.05e-07!126;UBERON:0004185!2.05e-07!126;UBERON:0004177!4.71e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.27e-10,69;UBERON:0003929,2.45e-10,55;UBERON:0000490,5.85e-10,66;UBERON:0002193,3.83e-09,48;UBERON:0002405,3.83e-09,48;UBERON:0002390,2.41e-08,45;UBERON:0003061,2.41e-08,45;UBERON:0004119,8.83e-08,118;UBERON:0000925,8.83e-08,118;UBERON:0006595,8.83e-08,118;UBERON:0001007,1.21e-07,116;UBERON:0001555,1.21e-07,116;UBERON:0007026,1.21e-07,116;UBERON:0004177,1.66e-07,29;UBERON:0005057,1.66e-07,29;UBERON:0004921,2.58e-07,114;UBERON:0000077,3.57e-07,35;UBERON:0002370,3.65e-07,23;UBERON:0000974,3.65e-07,23;UBERON:0004807,3.65e-07,23;UBERON:0005058,3.65e-07,23;UBERON:0003351,3.65e-07,23;UBERON:0009113,3.65e-07,23;UBERON:0003295,3.65e-07,23;UBERON:0009722,3.65e-07,23;UBERON:0005562,3.65e-07,23;UBERON:0007690,3.65e-07,23;UBERON:0006562,8.33e-07,24;UBERON:0001557,8.33e-07,24;UBERON:0001042,8.33e-07,24;UBERON:0008814,8.33e-07,24;UBERON:0009145,8.33e-07,24|phase1_expression=1.28119077683835,2.09385244583617,2.72999543633722,2.41971369045464,2.00358291978539,4.8684988854448,3.27057696833736,3.09895976259783,7.46180227403834,5.61754863172784,1.88339765048055,1.51567102091139,2.9104124088305,3.14713448708391,2.6648780945253,2.02475267389826,2.09868563438444,1.57731082679119,1.37114433605739,2.12194825899015,1.10556277196391,2.48227378002213,3.13439746966722,1.59992422793407,2.2940928106717,5.16808767703518,1.29228598847722,3.01659725760245,0.950117097281869,1.76421090831952,2.66076612786366,0,0.61506478758457,0,0.866554859253824,0.831173226792462,1.63335485009895,15.0671387065287,10.1573594788094,7.85285615960697,17.0587131528994,15.7100461540443,13.1087795318411,0.755380907853464,0.811015449756117,1.28482726513177,0,0.436050312760893,0.219686182734472,0.388859798148567,0.139986421625363,0,1.00669563634642,4.35217285206807,7.39406358113421,1.28629718017973,0.286533439938757,2.06268836910977,0.202316460859598,0.528990979272033,0,0,0,0,0,1.4209602298922,0.599200221036809,1.15265491596466,0.311068836925433,0.270011876663381,0,0,0,0.367472397644862,0.287536413054709,0.919218786610021,2.20231761998777,0.383062014255563,1.68967186581868,0.263772575460388,0.457438218012048,1.56274011167028,0.837548997004143,0,1.06958773443767,1.76777151284201,0.854230084794618,0.372798891650601,0.681535739998656,0.151143120213571,2.31891590961342,0.860423876981386,2.03991400112325,2.15881276655127,1.29955283489534,1.79210754838934,1.40444420131752,0.681721290312231,0.519572009205738,0.35333957451034,1.26759077799012,2.56652954828636,2.54805239706646,0,0.865964164044856,0.506719730950197,0,2.39786147410026,3.6251303710604,0.29688427812965,0.693941307064543,0.913396434936424,1.38369298353635,0.60289056221049,1.17588707135705,0.628332956648377,1.97755974187499,1.01219549843938,4.42305275974937,0.808834249737046,0.883366073841574,0.484875253135222,1.86391761218122,1.46390398505774,1.67557365450764,3.0654846625031,4.91242010474273,1.79970819298022,4.3203877204842,1.19832511523858,0,0.251308704225729,0.695297280769106,0.511430914660661,2.28566849015516,1.29793010454206,0.611036183101898,2.11491850037158,0.758168275301024,1.26265113531884,0.910843100738926,1.14951052216736,0.900310649026746,1.05493372485001,1.42876648217788,0.640568601424249,0.468508622798644,2.58703370739016,1.07783996466421,1.89106080167819,1.05570674498369,0.876782929710299,1.66828349535359,1.74126083261083,1.64625709126355,1.39323986772945,5.61770549850588,3.08817488537658,1.98914449576915,0.414251545071004,0.703578179943289,1.08037236876609,0.473489471170421,0.590292695242212,0.617068451549513,1.16266972375204,0.536546802799238,0.817357396570186,0.658239399653922,0.656669856316381,0.810688095458557,0.584799949701329,0.219550115291051,0.536825675041487,1.05144974282064,0.720332286654991,0.330418782983798,0.528901133327089,0.639864751605702,1.85789337488351,1.41754207454303,2.01683524623343,2.00140239460383,0.951128130562796,1.42358718463353,2.14108641141214,1.75934646160189,1.79060824837036,1.75467678407208,6.29173586057955,0.648414149624083,1.1948476395262,0.189667900953082,1.71372768914593,1.1270773567308,1.22190796707189,0.969762435838129,0.98190147846446,1.39120381673366,1.32849133181642,1.41298855057237,0.987177311374404,1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:218914 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q65Z40 | |||
|association_with_transcript=30bp_to_ENSMUST00000169910_5end | |||
|cluster_id=chr14:35487338..35487391,+ | |||
|description=CAGE_peak_4_at_Wapal_5end | |||
|id=chr14:35487338..35487391,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.05e-11!70;UBERON:0005911!1.35e-10!69;UBERON:0003929!3.07e-10!55;UBERON:0000490!6.07e-10!66;UBERON:0005057!1.16e-09!51;UBERON:0002193!2.88e-08!48;UBERON:0004119!7.05e-08!130;UBERON:0000925!7.05e-08!130;UBERON:0006595!7.05e-08!130;UBERON:0001007!9.76e-08!128;UBERON:0001555!9.76e-08!128;UBERON:0007026!9.76e-08!128;UBERON:0002390!1.62e-07!45;UBERON:0003061!1.62e-07!45;UBERON:0004921!2.05e-07!126;UBERON:0004185!2.05e-07!126;UBERON:0004177!4.71e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,2.27e-10,69;UBERON:0003929,2.45e-10,55;UBERON:0000490,5.85e-10,66;UBERON:0002193,3.83e-09,48;UBERON:0002405,3.83e-09,48;UBERON:0002390,2.41e-08,45;UBERON:0003061,2.41e-08,45;UBERON:0004119,8.83e-08,118;UBERON:0000925,8.83e-08,118;UBERON:0006595,8.83e-08,118;UBERON:0001007,1.21e-07,116;UBERON:0001555,1.21e-07,116;UBERON:0007026,1.21e-07,116;UBERON:0004177,1.66e-07,29;UBERON:0005057,1.66e-07,29;UBERON:0004921,2.58e-07,114;UBERON:0000077,3.57e-07,35;UBERON:0002370,3.65e-07,23;UBERON:0000974,3.65e-07,23;UBERON:0004807,3.65e-07,23;UBERON:0005058,3.65e-07,23;UBERON:0003351,3.65e-07,23;UBERON:0009113,3.65e-07,23;UBERON:0003295,3.65e-07,23;UBERON:0009722,3.65e-07,23;UBERON:0005562,3.65e-07,23;UBERON:0007690,3.65e-07,23;UBERON:0006562,8.33e-07,24;UBERON:0001557,8.33e-07,24;UBERON:0001042,8.33e-07,24;UBERON:0008814,8.33e-07,24;UBERON:0009145,8.33e-07,24 | |||
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| |||
|short_description=p4@Wapal | |||
}} |
Revision as of 07:08, 4 August 2015
Short description: | p4@Wapal |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Wapal_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 30bp_to_ENSMUST00000169910_5end |
EntrezGene: | 218914 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 2.27e-10 | 69 |
gut epithelium | 2.45e-10 | 55 |
unilaminar epithelium | 5.85e-10 | 66 |
hemolymphoid system | 3.83e-09 | 48 |
immune system | 3.83e-09 | 48 |
hematopoietic system | 2.41e-08 | 45 |
blood island | 2.41e-08 | 45 |
endoderm-derived structure | 8.83e-08 | 118 |
endoderm | 8.83e-08 | 118 |
presumptive endoderm | 8.83e-08 | 118 |
digestive system | 1.21e-07 | 116 |
digestive tract | 1.21e-07 | 116 |
primitive gut | 1.21e-07 | 116 |
hemopoietic organ | 1.66e-07 | 29 |
immune organ | 1.66e-07 | 29 |
subdivision of digestive tract | 2.58e-07 | 114 |
mixed endoderm/mesoderm-derived structure | 3.57e-07 | 35 |
thymus | 3.65e-07 | 23 |
neck | 3.65e-07 | 23 |
respiratory system epithelium | 3.65e-07 | 23 |
hemolymphoid system gland | 3.65e-07 | 23 |
pharyngeal epithelium | 3.65e-07 | 23 |
thymic region | 3.65e-07 | 23 |
pharyngeal gland | 3.65e-07 | 23 |
entire pharyngeal arch endoderm | 3.65e-07 | 23 |
thymus primordium | 3.65e-07 | 23 |
early pharyngeal endoderm | 3.65e-07 | 23 |
pharynx | 8.33e-07 | 24 |
upper respiratory tract | 8.33e-07 | 24 |
chordate pharynx | 8.33e-07 | 24 |
pharyngeal arch system | 8.33e-07 | 24 |
pharyngeal region of foregut | 8.33e-07 | 24 |