FFCP PHASE1:Mm9::chr19:55177582..55177589,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=14732|HGNC=|MCL_coexpression_id=3207|UniProt=|association_with_transcript=27bp_to_uc008hxj.1_5end|description=CAGE_peak_8_at_Gpam_5end|id=chr19:55177582..55177589,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,2.65e-13,3;CL:0000359,2.65e-13,3;CL:0002539,2.65e-13,3;CL:0000514,2.65e-13,3;CL:0000680,7.12e-07,6;CL:0000187,7.12e-07,6;CL:0000056,7.12e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!1.27e-07!27;UBERON:0002048!1.51e-07!14;UBERON:0000117!1.51e-07!14;UBERON:0000171!1.51e-07!14;UBERON:0000170!1.51e-07!14;UBERON:0005597!1.51e-07!14;UBERON:0000118!1.51e-07!14;UBERON:0005153!6.46e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.99e-17,4;UBERON:0001637,1.99e-17,4;UBERON:0004573,1.99e-17,4;UBERON:0003509,1.99e-17,4;UBERON:0004571,1.99e-17,4;UBERON:0010191,1.99e-17,4;UBERON:0004572,1.99e-17,4;UBERON:0000055,5.63e-14,5;UBERON:0007500,5.63e-14,5;UBERON:0001981,5.63e-14,5;UBERON:0002049,5.63e-14,5;UBERON:0007798,5.63e-14,5;UBERON:0004537,5.63e-14,5;UBERON:0006965,5.63e-14,5;UBERON:0004535,1.08e-13,23;UBERON:0001009,1.08e-13,23;UBERON:0001135,2.65e-13,3;UBERON:0004237,2.65e-13,3;UBERON:0004695,2.65e-13,3;UBERON:0002111,2.65e-13,3;UBERON:0004178,2.65e-13,3;UBERON:0004872,4.04e-09,33;UBERON:0000383,5.52e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,2.63580021170738,1.65192076945513,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0.70667914902068,1.12674735821344,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0.691846491768175,0.301445281105245,0.23517741427141,1.75933227861546,0,3.18118585223806,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0.324482526135515,0,0.373220911830279,0,0,0,0,0,0,0.272145996605311,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.987359099480883,2.13417703302824,2.67527071501324,4.23979963533464,1.09775057645525,2.14730270016595,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0.739012760666419,0,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0,0.585400943573396,0.315270288212382,0.8858587585951,0.797273843287435,1.3109065177259,1.03610989119537,1.01254341007058,0,0,0,1.37968373152366,0.160550589987792,0.35163505977661,0,2.27223834483936,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0,0.99358059645788,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.72375509913787,0.954978752025092,0.328281799490123,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,1.01373675294467,0.704143431874524,0.13020438484395,0.524296722128554,0,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.13365191807606,0,0,0,0.386379188064381,0.93841237725591,1.09890974560359,0.428736758158132,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0.188626341386076,0.187283014939765,0.192075457214608,0.34461281373368,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,2.20591419119516,1.39120701372253|short_description=p8@Gpam}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14732 | |||
|HGNC= | |||
|MCL_coexpression_id=3207 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=27bp_to_uc008hxj.1_5end | |||
|cluster_id=chr19:55177582..55177589,- | |||
|description=CAGE_peak_8_at_Gpam_5end | |||
|id=chr19:55177582..55177589,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,2.65e-13,3;CL:0000359,2.65e-13,3;CL:0002539,2.65e-13,3;CL:0000514,2.65e-13,3;CL:0000680,7.12e-07,6;CL:0000187,7.12e-07,6;CL:0000056,7.12e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!1.27e-07!27;UBERON:0002048!1.51e-07!14;UBERON:0000117!1.51e-07!14;UBERON:0000171!1.51e-07!14;UBERON:0000170!1.51e-07!14;UBERON:0005597!1.51e-07!14;UBERON:0000118!1.51e-07!14;UBERON:0005153!6.46e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.99e-17,4;UBERON:0001637,1.99e-17,4;UBERON:0004573,1.99e-17,4;UBERON:0003509,1.99e-17,4;UBERON:0004571,1.99e-17,4;UBERON:0010191,1.99e-17,4;UBERON:0004572,1.99e-17,4;UBERON:0000055,5.63e-14,5;UBERON:0007500,5.63e-14,5;UBERON:0001981,5.63e-14,5;UBERON:0002049,5.63e-14,5;UBERON:0007798,5.63e-14,5;UBERON:0004537,5.63e-14,5;UBERON:0006965,5.63e-14,5;UBERON:0004535,1.08e-13,23;UBERON:0001009,1.08e-13,23;UBERON:0001135,2.65e-13,3;UBERON:0004237,2.65e-13,3;UBERON:0004695,2.65e-13,3;UBERON:0002111,2.65e-13,3;UBERON:0004178,2.65e-13,3;UBERON:0004872,4.04e-09,33;UBERON:0000383,5.52e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,2.63580021170738,1.65192076945513,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0.0914876436024097,0,0.558365998002762,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0.70667914902068,1.12674735821344,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0,0,0.691846491768175,0.301445281105245,0.23517741427141,1.75933227861546,0,3.18118585223806,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0,0,0,0.449371918214468,0,0,0,0,0.20778804455956,0.324482526135515,0,0.373220911830279,0,0,0,0,0,0,0.272145996605311,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0.154267112887378,0,0,0.233530684734339,0.987359099480883,2.13417703302824,2.67527071501324,4.23979963533464,1.09775057645525,2.14730270016595,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0,0.147610147979602,0.470996183524124,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0.739012760666419,0,0.325929952884052,0.339490171550376,0.469380496577004,0.335012514883631,0,0.585400943573396,0.315270288212382,0.8858587585951,0.797273843287435,1.3109065177259,1.03610989119537,1.01254341007058,0,0,0,1.37968373152366,0.160550589987792,0.35163505977661,0,2.27223834483936,0,0.390438744296638,0,0,0,0,0,0,0.395287777946524,0,0.99358059645788,0.178065603667255,0,0.494910368917606,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0.72375509913787,0.954978752025092,0.328281799490123,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0.209088296014469,0,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.516639293910924,1.01373675294467,0.704143431874524,0.13020438484395,0.524296722128554,0,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.13365191807606,0,0,0,0.386379188064381,0.93841237725591,1.09890974560359,0.428736758158132,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505394423527595,0,0.188626341386076,0.187283014939765,0.192075457214608,0.34461281373368,0,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0,0.214871054048298,0.382576664137687,2.20591419119516,1.39120701372253 | |||
|short_description=p8@Gpam | |||
}} |
Revision as of 08:34, 4 August 2015
Short description: | p8@Gpam |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Gpam_5end |
Coexpression cluster: | MCL_coexpression_mm9:3207 |
Association with transcript: | 27bp_to_uc008hxj.1_5end |
EntrezGene: | 14732 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 2.65e-13 | 3 |
vascular associated smooth muscle cell | 2.65e-13 | 3 |
aortic smooth muscle cell | 2.65e-13 | 3 |
smooth muscle myoblast | 2.65e-13 | 3 |
muscle precursor cell | 7.12e-07 | 6 |
muscle cell | 7.12e-07 | 6 |
myoblast | 7.12e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
aorta | 1.99e-17 | 4 |
artery | 1.99e-17 | 4 |
systemic artery | 1.99e-17 | 4 |
arterial blood vessel | 1.99e-17 | 4 |
systemic arterial system | 1.99e-17 | 4 |
aortic system | 1.99e-17 | 4 |
arterial system | 1.99e-17 | 4 |
vessel | 5.63e-14 | 5 |
epithelial tube open at both ends | 5.63e-14 | 5 |
blood vessel | 5.63e-14 | 5 |
vasculature | 5.63e-14 | 5 |
vascular system | 5.63e-14 | 5 |
blood vasculature | 5.63e-14 | 5 |
vascular cord | 5.63e-14 | 5 |
cardiovascular system | 1.08e-13 | 23 |
circulatory system | 1.08e-13 | 23 |
smooth muscle tissue | 2.65e-13 | 3 |
blood vessel smooth muscle | 2.65e-13 | 3 |
arterial system smooth muscle | 2.65e-13 | 3 |
artery smooth muscle tissue | 2.65e-13 | 3 |
aorta smooth muscle tissue | 2.65e-13 | 3 |
splanchnic layer of lateral plate mesoderm | 4.04e-09 | 33 |
musculature of body | 5.52e-07 | 10 |