FFCP PHASE1:Mm9::chr10:41210134..41210137,-: Difference between revisions
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{{FFCP|EntrezGene=20598|HGNC=|MCL_coexpression_id=24|UniProt=O70572|association_with_transcript=0bp_to_ENSMUST00000126833,ENSMUST00000141542,uc007exs.1_5end|description=CAGE_peak_5_at_Smpd2_5end|id=chr10:41210134..41210137,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.06e-08,6;CL:0000677,2.06e-08,6;CL:0000584,2.06e-08,6;CL:0002563,3.63e-08,9;CL:0002251,3.63e-08,9;CL:0000066,5.95e-08,25;CL:0000075,3.35e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!6.28e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.85e-20,31;UBERON:0005409,2.87e-12,47;UBERON:0001242,1.48e-10,13;UBERON:0001262,1.48e-10,13;UBERON:0004786,1.48e-10,13;UBERON:0000485,3.47e-09,11;UBERON:0000344,5.29e-09,15;UBERON:0003350,3.63e-08,9;UBERON:0004808,3.63e-08,9;UBERON:0001277,3.63e-08,9|phase1_expression=1.44133962394315,1.74487703819681,2.27499619694768,4.23449895829562,6.51164448930251,0.33575854382378,0.467225281191051,0,0.422366166455,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,0,0,0,0.315462165358238,0,0.42438965179803,0.425216450755349,0.198581902401771,0.261199789138935,0.639969691173627,0.22940928106717,2.8711598205751,1.7230479846363,0.861884930743556,0.570070258369122,2.26827116783938,0.665191531965914,0,0,0,0.288851619751275,0.664938581433969,1.42918549383658,0,3.1253413780952,0,0,0,1.45653105909346,0.377690453926732,0.506884656097573,0.917733760808408,0,0.65407546914134,0.878744730937887,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0,0.85960031981627,1.03134418455488,0.202316460859598,1.05798195854407,0,0.338844532069132,0.889294796111139,0,0,1.4209602298922,0.599200221036809,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0,0,0,0.823388792421687,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.284743361598206,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0.679971333707751,0.539703191637817,1.29955283489534,0.448026887097336,0.421333260395256,0.340860645156116,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0,0,0,0,0.452167921657868,0,0.502666365318702,1.23597483867187,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,1.78819938646014,0.11981512450592,0.599902730993408,0,0,0.457500602818626,0.251308704225729,0.347648640384553,0,0.41557608911912,0.162241263067758,0.101839363850316,0.746441823660558,0.758168275301024,1.05220927943237,0.130120442962704,0.689706313300419,0.540186389416048,0.452114453507145,0.476255494059295,0.2562274405697,0.281105173679186,0.517406741478031,0,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0.568326998791185,0,0.703578179943289,0.180062061461015,0,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.700592054203017,0.658239399653922,0,0.56748166682099,0.584799949701329,0.219550115291051,0.536825675041487,0,0,3.30418782983798,0.528901133327089,1.06644125267617,0.232236671860439,0.515469845288373,1.00841762311671,0.22237804384487,0.380451252225118,1.42358718463353,0.988193728344065,0.754005626400808,0.795825888164603,1.36474860983384,2.69645822596266,1.94524244887225,1.59313018603494,0.189667900953082,0.114248512609729,0,0.203651327845314,1.16371492300575,0.561086559122548,0.379419222745544,0.590440591918409,0.627994911365499,0.493588655687202,1.48226313543574,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0.757736633841335,0.179397413521912,0.964887042726734,0,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0.163934945376675,0,0.631016438832513,0,0.646270193198397,0.238968797952552,0.222798674082394,0,0,0,0.790575555893047,0,0.425820255624806,0.178065603667255,0.162886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0.857348140126369,0.177340233642274,0.356737635204141,0,0.304464949114599,0.469343416127421,0.847328283455281,0.882113592219848,0.32977250588296,0.322928853391811,0.361877549568935,0.716234064018819,0.328281799490123,1.7488850197791,0,0,0,0,0.188368457004691,0,0.228778173206523,0.169978429993855,0.279902904647316,0,0.954670618015114,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.404593039154462,0.661227645802687,0.523511883968059,0.518459893167171,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.506868376472335,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0.632022241256357,0.202725215290164,0.205421914329655,0,0.1790266956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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20598 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O70572 | |||
|association_with_transcript=0bp_to_ENSMUST00000126833,ENSMUST00000141542,uc007exs.1_5end | |||
|cluster_id=chr10:41210134..41210137,- | |||
|description=CAGE_peak_5_at_Smpd2_5end | |||
|id=chr10:41210134..41210137,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.06e-08,6;CL:0000677,2.06e-08,6;CL:0000584,2.06e-08,6;CL:0002563,3.63e-08,9;CL:0002251,3.63e-08,9;CL:0000066,5.95e-08,25;CL:0000075,3.35e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.28e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.85e-20,31;UBERON:0005409,2.87e-12,47;UBERON:0001242,1.48e-10,13;UBERON:0001262,1.48e-10,13;UBERON:0004786,1.48e-10,13;UBERON:0000485,3.47e-09,11;UBERON:0000344,5.29e-09,15;UBERON:0003350,3.63e-08,9;UBERON:0004808,3.63e-08,9;UBERON:0001277,3.63e-08,9 | |||
|phase1_expression=1.44133962394315,1.74487703819681,2.27499619694768,4.23449895829562,6.51164448930251,0.33575854382378,0.467225281191051,0,0.422366166455,0,0.171217968225505,0.0797721589953364,0.171200729931206,0,0,0,0,0.315462165358238,0,0.42438965179803,0.425216450755349,0.198581902401771,0.261199789138935,0.639969691173627,0.22940928106717,2.8711598205751,1.7230479846363,0.861884930743556,0.570070258369122,2.26827116783938,0.665191531965914,0,0,0,0.288851619751275,0.664938581433969,1.42918549383658,0,3.1253413780952,0,0,0,1.45653105909346,0.377690453926732,0.506884656097573,0.917733760808408,0,0.65407546914134,0.878744730937887,0.777719596297134,0.139986421625363,1.43752564364972,0,0,0,0,0.85960031981627,1.03134418455488,0.202316460859598,1.05798195854407,0,0.338844532069132,0.889294796111139,0,0,1.4209602298922,0.599200221036809,0.384218305321555,0,0.135005938331691,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0,0,0,0.823388792421687,0,0.279182999001381,0,0.30559649555362,0.589257170947335,0.284743361598206,0,0.151452386666368,0.0755715601067855,0.579728977403356,0,0.679971333707751,0.539703191637817,1.29955283489534,0.448026887097336,0.421333260395256,0.340860645156116,0.259786004602869,1.06001872353102,0.985903938436763,0,0,0,0.216491041011214,0,0,0.5709193985953,0,0,0,0,0,0.452167921657868,0,0.502666365318702,1.23597483867187,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0,0,1.78819938646014,0.11981512450592,0.599902730993408,0,0,0.457500602818626,0.251308704225729,0.347648640384553,0,0.41557608911912,0.162241263067758,0.101839363850316,0.746441823660558,0.758168275301024,1.05220927943237,0.130120442962704,0.689706313300419,0.540186389416048,0.452114453507145,0.476255494059295,0.2562274405697,0.281105173679186,0.517406741478031,0,0.378212160335639,0,0.219195732427575,0,0.348252166522167,0.411564272815887,0.199034266818493,0,0,0.568326998791185,0,0.703578179943289,0.180062061461015,0,0.590292695242212,0.771335564436891,0.232533944750408,0.268273401399619,0.700592054203017,0.658239399653922,0,0.56748166682099,0.584799949701329,0.219550115291051,0.536825675041487,0,0,3.30418782983798,0.528901133327089,1.06644125267617,0.232236671860439,0.515469845288373,1.00841762311671,0.22237804384487,0.380451252225118,1.42358718463353,0.988193728344065,0.754005626400808,0.795825888164603,1.36474860983384,2.69645822596266,1.94524244887225,1.59313018603494,0.189667900953082,0.114248512609729,0,0.203651327845314,1.16371492300575,0.561086559122548,0.379419222745544,0.590440591918409,0.627994911365499,0.493588655687202,1.48226313543574,0.166845105716094,0,0.224862112384854,0,0,0,0,0.162135226775035,0.549122826376163,0,0,0.312037673114561,0.757736633841335,0.179397413521912,0.964887042726734,0,0.189491411770485,0.325929952884052,0,0.469380496577004,0.167506257441816,0.476087281772027,0.390267295715598,0.472905432318573,0.44292937929755,0.318909537314974,0,0.345369963731791,0.144649058581512,0,0,0.491764273019036,1.10374698521893,0.160550589987792,0.117211686592203,0.163934945376675,0,0.631016438832513,0,0.646270193198397,0.238968797952552,0.222798674082394,0,0,0,0.790575555893047,0,0.425820255624806,0.178065603667255,0.162886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0,0.356497378384721,0.316036757935816,0,0,0,0.540183282093931,0.258717367565509,0.857348140126369,0.177340233642274,0.356737635204141,0,0.304464949114599,0.469343416127421,0.847328283455281,0.882113592219848,0.32977250588296,0.322928853391811,0.361877549568935,0.716234064018819,0.328281799490123,1.7488850197791,0,0,0,0,0.188368457004691,0,0.228778173206523,0.169978429993855,0.279902904647316,0,0.954670618015114,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0.436725127492355,0.404593039154462,0.661227645802687,0.523511883968059,0.518459893167171,0,0,0,0.165458490457098,0.388902376688095,0.129159823477731,0.506868376472335,0.117357238645754,0,0.104859344425711,0,0.288030006257865,0.632022241256357,0.202725215290164,0.205421914329655,0,0.179026695667481,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.381034033274999,0.100826185136841,0.194915761479505,0.865906574762965,0.350630706544707,0.226730383615211,0.665957860122194,0.269141569828427,0.335769232728157,0.579568782096571,0.563047426353546,0,0.428736758158132,1.00314420807073,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0.31136204275253,0.798049746802062,0,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.114870937911227,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0.177475806159338,0,0.726732083161643,0.188218760830661,0.169229215783353,0,0.526139422875686,0,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,0,0.233931608445408,0.214871054048298,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p5@Smpd2 | |||
}} |
Revision as of 09:06, 4 August 2015
Short description: | p5@Smpd2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Smpd2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000126833, ENSMUST00000141542, uc007exs.1_5end |
EntrezGene: | 20598 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.06e-08 | 6 |
gut absorptive cell | 2.06e-08 | 6 |
enterocyte | 2.06e-08 | 6 |
intestinal epithelial cell | 3.63e-08 | 9 |
epithelial cell of alimentary canal | 3.63e-08 | 9 |
epithelial cell | 5.95e-08 | 25 |
columnar/cuboidal epithelial cell | 3.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.85e-20 | 31 |
gastrointestinal system | 2.87e-12 | 47 |
intestinal mucosa | 1.48e-10 | 13 |
wall of intestine | 1.48e-10 | 13 |
gastrointestinal system mucosa | 1.48e-10 | 13 |
simple columnar epithelium | 3.47e-09 | 11 |
mucosa | 5.29e-09 | 15 |
epithelium of mucosa | 3.63e-08 | 9 |
gastrointestinal system epithelium | 3.63e-08 | 9 |
intestinal epithelium | 3.63e-08 | 9 |