FFCP PHASE1:Mm9::chr3:96405007..96405062,+: Difference between revisions
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{{FFCP|EntrezGene=280411|HGNC=|MCL_coexpression_id=1231|UniProt=G3X9C8,Q8BQ89|association_with_transcript=0bp_to_ENSMUST00000062058,NM_001163170,uc008qnh.1_5end|description=CAGE_peak_1_at_Lix1l_5end|id=chr3:96405007..96405062,+|ontology_enrichment_celltype=CL:0000055!3.78e-19!50;CL:0002319!6.10e-16!43;CL:0000221!1.51e-15!44;CL:0000133!1.51e-15!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!4.46e-11!33;CL:0000047!4.46e-11!33;CL:0000031!4.46e-11!33;CL:0000404!4.46e-11!33;CL:0002321!3.03e-08!70;CL:0000220!3.03e-08!70|ontology_enrichment_celltype_v019_2=CL:0002319,5.99e-16,43;CL:0000221,1.49e-15,44;CL:0000133,1.49e-15,44;CL:0000393,1.51e-14,39;CL:0000211,1.51e-14,39;CL:0000540,4.41e-11,33;CL:0000047,4.41e-11,33;CL:0000031,4.41e-11,33;CL:0000404,4.41e-11,33;CL:0002321,2.60e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.53e-09!75;UBERON:0001016!2.53e-09!75;UBERON:0004121!2.82e-09!102;UBERON:0000924!2.82e-09!102;UBERON:0006601!2.82e-09!102;UBERON:0001017!2.94e-09!73;UBERON:0005743!2.94e-09!73|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.02e-09,92;UBERON:0001016,2.51e-09,75;UBERON:0001017,2.91e-09,73;UBERON:0004121,1.02e-08,95;UBERON:0000924,1.02e-08,95;UBERON:0006601,1.02e-08,95|phase1_expression=96.7299036512956,2.44282785347553,0.909998478779072,0,0,0,0.233612640595526,2.7115897922731,0,0,0,0.0797721589953364,0,0.0874204024189974,2.33176833270964,3.03712901084739,0,1.73504190947031,1.37114433605739,2.12194825899015,22.4514285998824,2.28369187762036,1.56719873483361,0.319984845586813,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,5.71527606113668,5.53558308826113,0,0,0,0,0,1.5626706890476,0.523523743973798,0.588231488031014,0,1.45653105909346,120.231461166676,117.293109420978,99.4823396716314,395.10762889576,83.7216600500915,179.044238928595,158.654797644615,121.788186814065,163.877923376068,1.00669563634642,1.45072428402269,0.336093799142464,90.2980620486174,98.2809698989936,104.681434732321,80.1173185004007,77.7616739529888,89.3702278943713,107.413716665915,124.50127145556,61.6431306337758,56.3653826663175,64.6536904600951,157.290058022162,142.160772968975,105.037577268488,96.5292459071588,115.67872874326,89.9800600871981,81.2796230701938,94.3179153955146,95.4620891341634,68.0221902091416,23.1243350098716,22.6006588410782,21.6585211891303,73.9882074166387,60.5648200647952,69.2814782840491,25.1264699101243,26.449842671489,27.1980881042722,77.7819465650483,61.7893094668107,73.0685827635178,24.686739026618,54.260380156672,51.8857434776003,24.0918685554788,3.39985666853875,3.2382191498269,5.19821133958135,7.16843019355737,14.8871085339657,77.7162270955943,79.4945174084778,80.2080834138472,26.4785629180159,102.661181931454,168.171458206386,199.098676882933,0.432982082022428,1.52015919285059,0.505524445014783,9.1347103775248,12.4290184150642,50.6187694211052,44.0652729985985,40.7983740938269,34.8229400856648,35.1183752487611,45.7420070757892,43.1036408260787,21.5059621928905,39.9094225098956,16.8076004870476,53.7065941825398,22.9675179198809,23.7588874036259,20.5030937339934,27.2286141220739,27.8564120061895,12.0064815948038,2.99537811264801,2.39961092397363,1.77898317902291,22.6183865501282,21.0450277296568,54.7852975212089,20.3374454624963,18.6672283851141,26.3890816590641,18.9822277789276,73.3243419722277,29.484452034592,13.6470289554184,17.8875577503503,48.0144434532377,62.7632745103381,59.0603785761545,51.6917525176503,57.3547687845694,58.2917427296067,50.2241243640146,28.9747775227698,41.8201906289714,52.0041720461503,54.5448484908241,55.8949117690316,65.0630563187899,62.68538997399,54.1207018752891,64.4871024491918,0.702213187313235,0.51469581422943,1.42081749697796,44.3249153225974,47.6087901761625,45.3756394881757,52.5573312999167,53.3231068035464,48.7484076724115,53.9478751820946,51.5084930687269,45.3049528384618,54.798430021189,44.817717693593,45.1553269170416,44.1523962024504,41.2754216747175,42.1408154907567,27.9685631590289,76.0465085482912,1.32167513193519,7.1401652999157,49.269585873639,49.4664111062734,40.3355153938152,28.840744021138,29.131523743678,23.0173007596197,16.6085171540579,18.1168850196412,33.9302531880364,22.6810378126912,24.9554031512474,21.5716658077013,13.6166971421057,13.7407478545513,50.2619937525666,29.47611625331,34.9393980586549,34.0097717501675,32.9719228184964,34.787366665598,24.6622494784603,13.5801336141234,11.1469096767376,11.9695249004147,8.00422093135302,13.5144535630036,15.9212786041694,6.2961391467759,6.6943840058206,11.0941493486112,9.16653066413111,12.6586300478357,14.9164408633033,8.23684239564244,107.826154895516,23.4448797031157,17.4741096944154,8.5876818502018,6.99649912735457,10.1313139486307,42.3084805481525,53.0575952957357,55.4080919902888,48.2076043601534,41.3054836987764,40.3690080434776,44.9902481274566,40.3926651065644,69.2018282626178,78.3985001356663,70.3195529779518,40.638102049503,43.861985393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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:280411 | |||
|HGNC= | |||
|MCL_coexpression_id=1231 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3X9C8,uniprot:Q8BQ89 | |||
|association_with_transcript=0bp_to_ENSMUST00000062058,NM_001163170,uc008qnh.1_5end | |||
|cluster_id=chr3:96405007..96405062,+ | |||
|description=CAGE_peak_1_at_Lix1l_5end | |||
|id=chr3:96405007..96405062,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.78e-19!50;CL:0002319!6.10e-16!43;CL:0000221!1.51e-15!44;CL:0000133!1.51e-15!44;CL:0000393!1.54e-14!39;CL:0000211!1.54e-14!39;CL:0000540!4.46e-11!33;CL:0000047!4.46e-11!33;CL:0000031!4.46e-11!33;CL:0000404!4.46e-11!33;CL:0002321!3.03e-08!70;CL:0000220!3.03e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.99e-16,43;CL:0000221,1.49e-15,44;CL:0000133,1.49e-15,44;CL:0000393,1.51e-14,39;CL:0000211,1.51e-14,39;CL:0000540,4.41e-11,33;CL:0000047,4.41e-11,33;CL:0000031,4.41e-11,33;CL:0000404,4.41e-11,33;CL:0002321,2.60e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.53e-09!75;UBERON:0001016!2.53e-09!75;UBERON:0004121!2.82e-09!102;UBERON:0000924!2.82e-09!102;UBERON:0006601!2.82e-09!102;UBERON:0001017!2.94e-09!73;UBERON:0005743!2.94e-09!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.02e-09,92;UBERON:0001016,2.51e-09,75;UBERON:0001017,2.91e-09,73;UBERON:0004121,1.02e-08,95;UBERON:0000924,1.02e-08,95;UBERON:0006601,1.02e-08,95 | |||
|phase1_expression=96.7299036512956,2.44282785347553,0.909998478779072,0,0,0,0.233612640595526,2.7115897922731,0,0,0,0.0797721589953364,0,0.0874204024189974,2.33176833270964,3.03712901084739,0,1.73504190947031,1.37114433605739,2.12194825899015,22.4514285998824,2.28369187762036,1.56719873483361,0.319984845586813,0.45881856213434,0.57423196411502,0.86152399231815,0.215471232685889,0.190023419456374,0.252030129759931,0.221730510655305,5.71527606113668,5.53558308826113,0,0,0,0,0,1.5626706890476,0.523523743973798,0.588231488031014,0,1.45653105909346,120.231461166676,117.293109420978,99.4823396716314,395.10762889576,83.7216600500915,179.044238928595,158.654797644615,121.788186814065,163.877923376068,1.00669563634642,1.45072428402269,0.336093799142464,90.2980620486174,98.2809698989936,104.681434732321,80.1173185004007,77.7616739529888,89.3702278943713,107.413716665915,124.50127145556,61.6431306337758,56.3653826663175,64.6536904600951,157.290058022162,142.160772968975,105.037577268488,96.5292459071588,115.67872874326,89.9800600871981,81.2796230701938,94.3179153955146,95.4620891341634,68.0221902091416,23.1243350098716,22.6006588410782,21.6585211891303,73.9882074166387,60.5648200647952,69.2814782840491,25.1264699101243,26.449842671489,27.1980881042722,77.7819465650483,61.7893094668107,73.0685827635178,24.686739026618,54.260380156672,51.8857434776003,24.0918685554788,3.39985666853875,3.2382191498269,5.19821133958135,7.16843019355737,14.8871085339657,77.7162270955943,79.4945174084778,80.2080834138472,26.4785629180159,102.661181931454,168.171458206386,199.098676882933,0.432982082022428,1.52015919285059,0.505524445014783,9.1347103775248,12.4290184150642,50.6187694211052,44.0652729985985,40.7983740938269,34.8229400856648,35.1183752487611,45.7420070757892,43.1036408260787,21.5059621928905,39.9094225098956,16.8076004870476,53.7065941825398,22.9675179198809,23.7588874036259,20.5030937339934,27.2286141220739,27.8564120061895,12.0064815948038,2.99537811264801,2.39961092397363,1.77898317902291,22.6183865501282,21.0450277296568,54.7852975212089,20.3374454624963,18.6672283851141,26.3890816590641,18.9822277789276,73.3243419722277,29.484452034592,13.6470289554184,17.8875577503503,48.0144434532377,62.7632745103381,59.0603785761545,51.6917525176503,57.3547687845694,58.2917427296067,50.2241243640146,28.9747775227698,41.8201906289714,52.0041720461503,54.5448484908241,55.8949117690316,65.0630563187899,62.68538997399,54.1207018752891,64.4871024491918,0.702213187313235,0.51469581422943,1.42081749697796,44.3249153225974,47.6087901761625,45.3756394881757,52.5573312999167,53.3231068035464,48.7484076724115,53.9478751820946,51.5084930687269,45.3049528384618,54.798430021189,44.817717693593,45.1553269170416,44.1523962024504,41.2754216747175,42.1408154907567,27.9685631590289,76.0465085482912,1.32167513193519,7.1401652999157,49.269585873639,49.4664111062734,40.3355153938152,28.840744021138,29.131523743678,23.0173007596197,16.6085171540579,18.1168850196412,33.9302531880364,22.6810378126912,24.9554031512474,21.5716658077013,13.6166971421057,13.7407478545513,50.2619937525666,29.47611625331,34.9393980586549,34.0097717501675,32.9719228184964,34.787366665598,24.6622494784603,13.5801336141234,11.1469096767376,11.9695249004147,8.00422093135302,13.5144535630036,15.9212786041694,6.2961391467759,6.6943840058206,11.0941493486112,9.16653066413111,12.6586300478357,14.9164408633033,8.23684239564244,107.826154895516,23.4448797031157,17.4741096944154,8.5876818502018,6.99649912735457,10.1313139486307,42.3084805481525,53.0575952957357,55.4080919902888,48.2076043601534,41.3054836987764,40.3690080434776,44.9902481274566,40.3926651065644,69.2018282626178,78.3985001356663,70.3195529779518,40.638102049503,43.8619853939375,40.3570873442417,37.6978209848181,14.1415477792864,15.2446924635901,14.6246475541508,24.0825884981688,22.1530087659264,97.7052274444986,32.0638077549554,78.8770548540642,77.3068713707344,103.834077707209,97.2603007666887,91.3474563737816,108.418311292123,90.6775971751763,85.3387105101031,79.0575555893047,35.6666661228206,59.3309556170563,101.141262883001,82.5836883922631,81.8251809943776,9.2921596837974,27.9197731578229,24.4882081141448,16.9744571780308,25.6912646806272,25.2096821314021,25.3259727304857,18.5402202033528,26.7373033788541,12.009396801561,8.4334886859999,6.18813259489121,34.0439605753788,38.3530130286691,39.0663225023919,33.4365774649284,31.0345408873979,49.9432689285798,41.9600002535408,27.4018454203139,17.835049812842,11.4389318266463,34.1819016985191,33.4719093471204,48.1163991553799,31.1817821878566,30.3205753767967,15.9216672752709,18.9462543809403,25.0324157714188,7.68918963590337,60.4713523132242,30.3719024886327,7.34636982318295,7.10809984149331,6.63456702298916,3.73952545986482,2.93898049879682,3.04039942369732,29.5947891584685,45.8687190692646,37.4107819513402,41.6900615572153,28.6450965539822,34.9380101993884,34.1206796353596,40.4175398496893,21.9874991266585,17.1091764745167,10.5627683224777,18.0381740378941,50.2375594707769,55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| |||
|short_description=p1@Lix1l | |||
}} |
Revision as of 09:30, 4 August 2015
Short description: | p1@Lix1l |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lix1l_5end |
Coexpression cluster: | MCL_coexpression_mm9:1231 |
Association with transcript: | 0bp_to_ENSMUST00000062058, NM_001163170, uc008qnh.1_5end |
EntrezGene: | 280411 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.99e-16 | 43 |
ectodermal cell | 1.49e-15 | 44 |
neurectodermal cell | 1.49e-15 | 44 |
electrically responsive cell | 1.51e-14 | 39 |
electrically active cell | 1.51e-14 | 39 |
neuron | 4.41e-11 | 33 |
neuronal stem cell | 4.41e-11 | 33 |
neuroblast | 4.41e-11 | 33 |
electrically signaling cell | 4.41e-11 | 33 |
embryonic cell | 2.60e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.02e-09 | 92 |
nervous system | 2.51e-09 | 75 |
central nervous system | 2.91e-09 | 73 |
ectoderm-derived structure | 1.02e-08 | 95 |
ectoderm | 1.02e-08 | 95 |
presumptive ectoderm | 1.02e-08 | 95 |