FFCP PHASE1:Mm9::chr2:158526707..158526708,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=202|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:158526707..158526708,+|id=chr2:158526707..158526708,+|ontology_enrichment_celltype=CL:0000838!2.48e-07!12;CL:0000791!7.76e-07!9;CL:0000789!7.76e-07!9;CL:0002420!7.76e-07!9;CL:0002419!7.76e-07!9;CL:0000790!7.76e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,1.37e-12,9;CL:0000789,1.37e-12,9;CL:0002420,1.37e-12,9;CL:0002419,1.37e-12,9;CL:0000790,1.37e-12,9;CL:0000838,9.46e-12,12;CL:0000893,3.18e-11,6;CL:0002489,3.18e-11,6;CL:0000898,3.18e-11,6;CL:0000809,3.18e-11,6;CL:0000810,3.18e-11,6;CL:0000895,3.18e-11,6;CL:0000808,3.18e-11,6;CL:0000894,3.18e-11,6;CL:0000806,3.18e-11,6;CL:0000807,3.18e-11,6;CL:0000805,3.18e-11,6;CL:0002425,3.18e-11,6;CL:0002436,3.18e-11,6;CL:0002427,3.18e-11,6;CL:0002428,3.18e-11,6;CL:0002429,3.18e-11,6;CL:0002433,3.18e-11,6;CL:0002431,3.18e-11,6;CL:0002432,3.18e-11,6;CL:0000624,5.33e-11,8;CL:0000542,1.07e-10,13;CL:0000051,1.07e-10,13;CL:0002031,1.46e-10,25;CL:0000084,5.18e-10,11;CL:0000827,5.18e-10,11;CL:0000738,1.00e-07,17;CL:0002087,1.00e-07,17;CL:0000988,1.48e-07,32;CL:0002032,1.48e-07,32;CL:0000037,1.48e-07,32;CL:0000837,1.48e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.96e-09!29;UBERON:0001004!2.39e-09!42;UBERON:0000065!4.68e-09!41;UBERON:0003408!4.83e-09!24;UBERON:0002370!9.32e-09!23;UBERON:0000974!9.32e-09!23;UBERON:0004807!9.32e-09!23;UBERON:0005058!9.32e-09!23;UBERON:0003351!9.32e-09!23;UBERON:0009113!9.32e-09!23;UBERON:0003295!9.32e-09!23;UBERON:0009722!9.32e-09!23;UBERON:0005562!9.32e-09!23;UBERON:0007690!9.32e-09!23;UBERON:0006562!5.53e-08!24;UBERON:0001557!5.53e-08!24;UBERON:0001042!5.53e-08!24;UBERON:0008814!5.53e-08!24;UBERON:0009145!5.53e-08!24;UBERON:0000477!6.83e-08!154;UBERON:0002193!3.23e-07!48;UBERON:0007811!5.90e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.91e-22,29;UBERON:0005057,5.91e-22,29;UBERON:0002193,3.19e-19,48;UBERON:0002405,3.19e-19,48;UBERON:0000077,3.30e-19,35;UBERON:0002390,3.66e-19,45;UBERON:0003061,3.66e-19,45;UBERON:0000065,5.14e-19,41;UBERON:0001004,2.06e-18,42;UBERON:0002370,3.03e-18,23;UBERON:0000974,3.03e-18,23;UBERON:0004807,3.03e-18,23;UBERON:0005058,3.03e-18,23;UBERON:0003351,3.03e-18,23;UBERON:0009113,3.03e-18,23;UBERON:0003295,3.03e-18,23;UBERON:0009722,3.03e-18,23;UBERON:0005562,3.03e-18,23;UBERON:0007690,3.03e-18,23;UBERON:0006562,2.65e-17,24;UBERON:0003408,2.65e-17,24;UBERON:0001557,2.65e-17,24;UBERON:0001042,2.65e-17,24;UBERON:0008814,2.65e-17,24;UBERON:0009145,2.65e-17,24;UBERON:0000072,6.70e-15,27;UBERON:0001041,1.46e-11,80;UBERON:0007811,3.98e-10,36;UBERON:0005911,7.24e-10,69;UBERON:0000153,7.93e-08,43;UBERON:0003081,1.07e-07,87|phase1_expression=0,0,0,0,0,0,0.233612640595526,1.54947988129892,4.08287294239834,3.04283884218592,2.39705155515707,2.39316476986009,1.19840510951844,1.22388563386596,0.999329285446988,1.21485160433896,0,5.36285681109004,3.15363197293199,6.36584477697045,0.850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,0.763991238884051,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,1.44932244350839,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0.593768556259299,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0.969750506270444,0,0.878342391034642,0.209446706813455,0.255457055208591,0.479260498023681,0,0.127070227073065,0.748953197024114,3.20250421973039,0.376963056338593,1.04294592115366,0.255715457330331,1.66230435647648,1.1356888414743,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.820837320395476,0.324275238183423,0.584799949701329,0.439100230582101,0.671032093801859,0.841159794256509,0.102904612379284,0.991256348951394,0,0,0,0.257734922644187,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.442655759869801,1.03327103585722,1.09899109488962,0,0.296452627087149,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0,0.179397413521912,0,0.923765950833023,0,0,0,0.469380496577004,1.17254380209271,2.14239276797412,0.780534591431195,1.261081152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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=202 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:158526707..158526708,+ | |||
|description=CAGE_peak_at_chr2:158526707..158526708,+ | |||
|id=chr2:158526707..158526708,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.48e-07!12;CL:0000791!7.76e-07!9;CL:0000789!7.76e-07!9;CL:0002420!7.76e-07!9;CL:0002419!7.76e-07!9;CL:0000790!7.76e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.37e-12,9;CL:0000789,1.37e-12,9;CL:0002420,1.37e-12,9;CL:0002419,1.37e-12,9;CL:0000790,1.37e-12,9;CL:0000838,9.46e-12,12;CL:0000893,3.18e-11,6;CL:0002489,3.18e-11,6;CL:0000898,3.18e-11,6;CL:0000809,3.18e-11,6;CL:0000810,3.18e-11,6;CL:0000895,3.18e-11,6;CL:0000808,3.18e-11,6;CL:0000894,3.18e-11,6;CL:0000806,3.18e-11,6;CL:0000807,3.18e-11,6;CL:0000805,3.18e-11,6;CL:0002425,3.18e-11,6;CL:0002436,3.18e-11,6;CL:0002427,3.18e-11,6;CL:0002428,3.18e-11,6;CL:0002429,3.18e-11,6;CL:0002433,3.18e-11,6;CL:0002431,3.18e-11,6;CL:0002432,3.18e-11,6;CL:0000624,5.33e-11,8;CL:0000542,1.07e-10,13;CL:0000051,1.07e-10,13;CL:0002031,1.46e-10,25;CL:0000084,5.18e-10,11;CL:0000827,5.18e-10,11;CL:0000738,1.00e-07,17;CL:0002087,1.00e-07,17;CL:0000988,1.48e-07,32;CL:0002032,1.48e-07,32;CL:0000037,1.48e-07,32;CL:0000837,1.48e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.96e-09!29;UBERON:0001004!2.39e-09!42;UBERON:0000065!4.68e-09!41;UBERON:0003408!4.83e-09!24;UBERON:0002370!9.32e-09!23;UBERON:0000974!9.32e-09!23;UBERON:0004807!9.32e-09!23;UBERON:0005058!9.32e-09!23;UBERON:0003351!9.32e-09!23;UBERON:0009113!9.32e-09!23;UBERON:0003295!9.32e-09!23;UBERON:0009722!9.32e-09!23;UBERON:0005562!9.32e-09!23;UBERON:0007690!9.32e-09!23;UBERON:0006562!5.53e-08!24;UBERON:0001557!5.53e-08!24;UBERON:0001042!5.53e-08!24;UBERON:0008814!5.53e-08!24;UBERON:0009145!5.53e-08!24;UBERON:0000477!6.83e-08!154;UBERON:0002193!3.23e-07!48;UBERON:0007811!5.90e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.91e-22,29;UBERON:0005057,5.91e-22,29;UBERON:0002193,3.19e-19,48;UBERON:0002405,3.19e-19,48;UBERON:0000077,3.30e-19,35;UBERON:0002390,3.66e-19,45;UBERON:0003061,3.66e-19,45;UBERON:0000065,5.14e-19,41;UBERON:0001004,2.06e-18,42;UBERON:0002370,3.03e-18,23;UBERON:0000974,3.03e-18,23;UBERON:0004807,3.03e-18,23;UBERON:0005058,3.03e-18,23;UBERON:0003351,3.03e-18,23;UBERON:0009113,3.03e-18,23;UBERON:0003295,3.03e-18,23;UBERON:0009722,3.03e-18,23;UBERON:0005562,3.03e-18,23;UBERON:0007690,3.03e-18,23;UBERON:0006562,2.65e-17,24;UBERON:0003408,2.65e-17,24;UBERON:0001557,2.65e-17,24;UBERON:0001042,2.65e-17,24;UBERON:0008814,2.65e-17,24;UBERON:0009145,2.65e-17,24;UBERON:0000072,6.70e-15,27;UBERON:0001041,1.46e-11,80;UBERON:0007811,3.98e-10,36;UBERON:0005911,7.24e-10,69;UBERON:0000153,7.93e-08,43;UBERON:0003081,1.07e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,1.54947988129892,4.08287294239834,3.04283884218592,2.39705155515707,2.39316476986009,1.19840510951844,1.22388563386596,0.999329285446988,1.21485160433896,0,5.36285681109004,3.15363197293199,6.36584477697045,0.850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71130424230945,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0.210324961351382,0.571301968807607,0.441737081903227,0.122490799214954,0,0.919218786610021,0,0.127687338085188,0.307213066512487,0,0,0,0.279182999001381,1.12552522006336,0.763991238884051,0.294628585473668,0.569486723196412,0.186399445825301,0.075726193333184,0,1.44932244350839,0,0,0.539703191637817,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0.593768556259299,0,0,0,0.301445281105245,0.117588707135705,0.125666591329675,0.247194967734374,0.289198713839823,0,0,0.441683036920787,0.969750506270444,0,0.878342391034642,0.209446706813455,0.255457055208591,0.479260498023681,0,0.127070227073065,0.748953197024114,3.20250421973039,0.376963056338593,1.04294592115366,0.255715457330331,1.66230435647648,1.1356888414743,0.101839363850316,0.248813941220186,0,0.210441855886474,0,0,0,0.30140963567143,0.136072998302656,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0,0.348252166522167,0,0.796137067273973,0,0,0,0,0.469052119962192,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0.820837320395476,0.324275238183423,0.584799949701329,0.439100230582101,0.671032093801859,0.841159794256509,0.102904612379284,0.991256348951394,0,0,0,0.257734922644187,0,0,0,0,0,0,0.397912944082302,0.19496408711912,0.898819408654221,0,0,0.189667900953082,0.342745537829186,0,0.203651327845314,0.193952487167626,0.280543279561274,0.442655759869801,1.03327103585722,1.09899109488962,0,0.296452627087149,0,0,0,0,0,0,0.575392274901621,0.324270453550071,0.823684239564244,0,0,0.624075346229121,0,0.179397413521912,0,0.923765950833023,0,0,0,0.469380496577004,1.17254380209271,2.14239276797412,0.780534591431195,1.26108115284953,0.664394068946325,1.11618338060241,2.94953966488328,1.20879487306127,2.4590339958857,0,0,0,0,1.12385412991454,0.234423373184406,0,0,0.315508219416257,0,0,0,0.222798674082394,0,0,0,0,1.28528526568723,0.567760340833074,0,0,0.329940245945071,0,0,0,0,0,0.614870295887855,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0.180938774784468,0.119372344003136,0.328281799490123,0.582961673259701,1.29797711407357,1.53783792718067,0,0,1.69531611304222,1.77702496037333,1.14389086603261,0.679913719975421,0.419854356970974,0.414599921413271,0,0,0,0.108005340821801,0,0,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.598066184175915,0.66183396182839,0.388902376688095,0.645799117388655,1.01373675294467,0.58678619322877,1.3020438484395,0.209718688851422,0,0.576060012515731,1.58005560314089,0.202725215290164,0.102710957164827,0.77952493786677,0.716106782669926,1.39076948346885,2.76449533895928,2.95379054349154,1.21159739937777,2.057583779685,2.41982844328417,3.50848370663109,2.88635524920988,3.62318396762864,0,0,0,0,0,0.187682475451182,0,0.214368379079066,0,1.12950368523413,0,0.572895513439397,0.515559547031063,0.685082519770642,1.5107877947794,0.675022500231806,1.35096360967266,0.453142408984205,0,0,0,0.170733605754134,0,0,0,0.44449345560323,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.655490552289177,0.0640251524048693,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0,0,0.685738504770831,0.354951612318675,0,0.145346416632329,0.282328141245992,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.197008964751127,0,0,0.192906610981141,0,0.935726433781634,0.214871054048298,0.191288332068843,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr2:158526707..158526708,+ | |||
}} |
Latest revision as of 10:32, 4 August 2015
Short description: | p@chr2:158526707..158526708, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:158526707..158526708, + |
Coexpression cluster: | MCL_coexpression_mm9:202 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.91e-22 | 29 |
immune organ | 5.91e-22 | 29 |
hemolymphoid system | 3.19e-19 | 48 |
immune system | 3.19e-19 | 48 |
mixed endoderm/mesoderm-derived structure | 3.30e-19 | 35 |
hematopoietic system | 3.66e-19 | 45 |
blood island | 3.66e-19 | 45 |
respiratory tract | 5.14e-19 | 41 |
respiratory system | 2.06e-18 | 42 |
thymus | 3.03e-18 | 23 |
neck | 3.03e-18 | 23 |
respiratory system epithelium | 3.03e-18 | 23 |
hemolymphoid system gland | 3.03e-18 | 23 |
pharyngeal epithelium | 3.03e-18 | 23 |
thymic region | 3.03e-18 | 23 |
pharyngeal gland | 3.03e-18 | 23 |
entire pharyngeal arch endoderm | 3.03e-18 | 23 |
thymus primordium | 3.03e-18 | 23 |
early pharyngeal endoderm | 3.03e-18 | 23 |
pharynx | 2.65e-17 | 24 |
gland of gut | 2.65e-17 | 24 |
upper respiratory tract | 2.65e-17 | 24 |
chordate pharynx | 2.65e-17 | 24 |
pharyngeal arch system | 2.65e-17 | 24 |
pharyngeal region of foregut | 2.65e-17 | 24 |
segment of respiratory tract | 6.70e-15 | 27 |
foregut | 1.46e-11 | 80 |
craniocervical region | 3.98e-10 | 36 |
endo-epithelium | 7.24e-10 | 69 |
anterior region of body | 7.93e-08 | 43 |
lateral plate mesoderm | 1.07e-07 | 87 |