FFCP PHASE1:Mm9::chr14:58143889..58143942,+: Difference between revisions
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{{FFCP|EntrezGene=239114|HGNC=|MCL_coexpression_id=13|UniProt=E9Q097|association_with_transcript=-204bp_to_ENSMUST00000089492_5end|description=CAGE_peak_2_at_Il17d_5end|id=chr14:58143889..58143942,+|ontology_enrichment_celltype=CL:0000117!6.36e-13!23;CL:0000337!6.36e-13!23;CL:0000221!1.08e-09!44;CL:0000133!1.08e-09!44;CL:0002319!1.99e-09!43;CL:0000393!2.44e-09!39;CL:0000211!2.44e-09!39;CL:0000540!3.26e-09!33;CL:0000047!3.26e-09!33;CL:0000031!3.26e-09!33;CL:0000404!3.26e-09!33;CL:0000055!5.19e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-14,23;CL:0000337,1.93e-14,23;CL:0000221,3.31e-09,44;CL:0000133,3.31e-09,44;CL:0002319,6.43e-09,43;CL:0000540,1.17e-08,33;CL:0000047,1.17e-08,33;CL:0000031,1.17e-08,33;CL:0000404,1.17e-08,33;CL:0000393,1.19e-08,39;CL:0000211,1.19e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.12e-23!73;UBERON:0005743!1.12e-23!73;UBERON:0001049!1.64e-23!52;UBERON:0005068!1.64e-23!52;UBERON:0006241!1.64e-23!52;UBERON:0007135!1.64e-23!52;UBERON:0000073!9.96e-23!75;UBERON:0001016!9.96e-23!75;UBERON:0000033!6.60e-22!63;UBERON:0000955!8.93e-22!50;UBERON:0006238!8.93e-22!50;UBERON:0002616!4.95e-21!49;UBERON:0004121!2.52e-20!102;UBERON:0000924!2.52e-20!102;UBERON:0006601!2.52e-20!102;UBERON:0002346!4.07e-20!71;UBERON:0003075!4.07e-20!71;UBERON:0007284!4.07e-20!71;UBERON:0002020!1.82e-19!34;UBERON:0003080!2.63e-18!40;UBERON:0003056!6.96e-18!49;UBERON:0002780!1.37e-17!39;UBERON:0001890!1.37e-17!39;UBERON:0006240!1.37e-17!39;UBERON:0002791!1.32e-16!29;UBERON:0003528!1.32e-16!29;UBERON:0001893!1.32e-16!29;UBERON:0000956!2.82e-12!21;UBERON:0001869!2.82e-12!21;UBERON:0000203!2.82e-12!21;UBERON:0002619!4.27e-10!17;UBERON:0000153!4.62e-09!94;UBERON:0000468!8.93e-09!333;UBERON:0007811!1.28e-08!86;UBERON:0004111!5.58e-08!122;UBERON:0000025!1.84e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.52e-27,54;UBERON:0001049,1.87e-26,52;UBERON:0005068,1.87e-26,52;UBERON:0006241,1.87e-26,52;UBERON:0007135,1.87e-26,52;UBERON:0001017,5.24e-25,73;UBERON:0001016,1.70e-23,75;UBERON:0002346,1.92e-23,64;UBERON:0003075,1.92e-23,64;UBERON:0007284,1.92e-23,64;UBERON:0000955,2.44e-23,47;UBERON:0006238,2.44e-23,47;UBERON:0010371,1.42e-22,73;UBERON:0002616,1.67e-22,46;UBERON:0002020,7.30e-22,34;UBERON:0004121,2.89e-21,95;UBERON:0000924,2.89e-21,95;UBERON:0006601,2.89e-21,95;UBERON:0003080,1.51e-20,40;UBERON:0002780,9.81e-20,39;UBERON:0001890,9.81e-20,39;UBERON:0006240,9.81e-20,39;UBERON:0003056,2.10e-19,49;UBERON:0003528,1.28e-18,29;UBERON:0002791,1.28e-18,29;UBERON:0001893,1.28e-18,29;UBERON:0000956,1.05e-13,21;UBERON:0001869,1.05e-13,21;UBERON:0000203,1.05e-13,21;UBERON:0010314,1.13e-13,92;UBERON:0002619,3.09e-11,17;UBERON:0000025,2.61e-07,114;UBERON:0004111,3.38e-07,122;UBERON:0002021,3.70e-07,10;UBERON:0000411,3.70e-07,10;UBERON:0001950,3.70e-07,10|phase1_expression=4.32401887182944,0.348975407639361,0.454999239389536,0,0,0.33575854382378,1.86890112476421,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,2.21112554392781,0,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0.997407872150954,0.816677425049476,0,0,0,0,0,0,1.76255545165808,1.01376931219515,0.734187008646726,3.9119567217402,1.30815093828268,3.95435128922049,2.3331587888914,1.25987779462826,0,0,0,0,1.28629718017973,4.29800159908135,2.06268836910977,6.87875966922632,4.7609188134483,5.07065122804943,2.71075625655306,3.55717918444456,0.449949858640699,0,0,3.59520132622086,4.61061966385865,4.45865332926454,5.94026128659439,4.41682418837902,4.28476476605705,4.8591079009355,6.61450315760752,4.12135525378416,6.43453150627015,1.10115880999389,6.2566795661742,4.76180253094355,3.95658863190582,6.58711033937349,2.08365348222704,5.30447698102624,5.06486349028512,5.95913166329559,4.12480019663135,4.8406371471695,6.52398060388552,0.530083353332288,0.68014404096107,0,0,0.679971333707751,0,0,0,0.421333260395256,0.511290967734173,0,0,2.53518155598025,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0,0.517875767294343,1.03909497345377,1.38788261412909,0.913396434936424,0.691846491768175,0.753613202763113,0.823120949949934,0.628332956648377,0.247194967734374,0.289198713839823,0,2.58826959915855,0.883366073841574,0.484875253135222,0,5.27005434620785,2.09446706813455,0.255457055208591,0,0,0,7.04016005202667,4.57500602818627,14.3245961408665,5.04090528557602,4.34716277461562,4.57133698031032,4.54275536589721,4.07357455401265,0.622034853050465,0.252722758433675,0.841767423545896,0.520481771850815,1.37941262660084,1.80062129805349,1.35634336052144,2.10913147369116,1.5373646434182,2.52994656311268,2.84573707812917,0.862271971731369,1.32374256117473,2.63926686245923,5.47989331068937,2.22437799380478,0.696504333044333,1.23469281844766,1.39323986772945,0,0,0,0.828503090142008,0.703578179943289,0.540186184383045,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.80482020419885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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:239114 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q097 | |||
|association_with_transcript=-204bp_to_ENSMUST00000089492_5end | |||
|cluster_id=chr14:58143889..58143942,+ | |||
|description=CAGE_peak_2_at_Il17d_5end | |||
|id=chr14:58143889..58143942,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.36e-13!23;CL:0000337!6.36e-13!23;CL:0000221!1.08e-09!44;CL:0000133!1.08e-09!44;CL:0002319!1.99e-09!43;CL:0000393!2.44e-09!39;CL:0000211!2.44e-09!39;CL:0000540!3.26e-09!33;CL:0000047!3.26e-09!33;CL:0000031!3.26e-09!33;CL:0000404!3.26e-09!33;CL:0000055!5.19e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.93e-14,23;CL:0000337,1.93e-14,23;CL:0000221,3.31e-09,44;CL:0000133,3.31e-09,44;CL:0002319,6.43e-09,43;CL:0000540,1.17e-08,33;CL:0000047,1.17e-08,33;CL:0000031,1.17e-08,33;CL:0000404,1.17e-08,33;CL:0000393,1.19e-08,39;CL:0000211,1.19e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.12e-23!73;UBERON:0005743!1.12e-23!73;UBERON:0001049!1.64e-23!52;UBERON:0005068!1.64e-23!52;UBERON:0006241!1.64e-23!52;UBERON:0007135!1.64e-23!52;UBERON:0000073!9.96e-23!75;UBERON:0001016!9.96e-23!75;UBERON:0000033!6.60e-22!63;UBERON:0000955!8.93e-22!50;UBERON:0006238!8.93e-22!50;UBERON:0002616!4.95e-21!49;UBERON:0004121!2.52e-20!102;UBERON:0000924!2.52e-20!102;UBERON:0006601!2.52e-20!102;UBERON:0002346!4.07e-20!71;UBERON:0003075!4.07e-20!71;UBERON:0007284!4.07e-20!71;UBERON:0002020!1.82e-19!34;UBERON:0003080!2.63e-18!40;UBERON:0003056!6.96e-18!49;UBERON:0002780!1.37e-17!39;UBERON:0001890!1.37e-17!39;UBERON:0006240!1.37e-17!39;UBERON:0002791!1.32e-16!29;UBERON:0003528!1.32e-16!29;UBERON:0001893!1.32e-16!29;UBERON:0000956!2.82e-12!21;UBERON:0001869!2.82e-12!21;UBERON:0000203!2.82e-12!21;UBERON:0002619!4.27e-10!17;UBERON:0000153!4.62e-09!94;UBERON:0000468!8.93e-09!333;UBERON:0007811!1.28e-08!86;UBERON:0004111!5.58e-08!122;UBERON:0000025!1.84e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.52e-27,54;UBERON:0001049,1.87e-26,52;UBERON:0005068,1.87e-26,52;UBERON:0006241,1.87e-26,52;UBERON:0007135,1.87e-26,52;UBERON:0001017,5.24e-25,73;UBERON:0001016,1.70e-23,75;UBERON:0002346,1.92e-23,64;UBERON:0003075,1.92e-23,64;UBERON:0007284,1.92e-23,64;UBERON:0000955,2.44e-23,47;UBERON:0006238,2.44e-23,47;UBERON:0010371,1.42e-22,73;UBERON:0002616,1.67e-22,46;UBERON:0002020,7.30e-22,34;UBERON:0004121,2.89e-21,95;UBERON:0000924,2.89e-21,95;UBERON:0006601,2.89e-21,95;UBERON:0003080,1.51e-20,40;UBERON:0002780,9.81e-20,39;UBERON:0001890,9.81e-20,39;UBERON:0006240,9.81e-20,39;UBERON:0003056,2.10e-19,49;UBERON:0003528,1.28e-18,29;UBERON:0002791,1.28e-18,29;UBERON:0001893,1.28e-18,29;UBERON:0000956,1.05e-13,21;UBERON:0001869,1.05e-13,21;UBERON:0000203,1.05e-13,21;UBERON:0010314,1.13e-13,92;UBERON:0002619,3.09e-11,17;UBERON:0000025,2.61e-07,114;UBERON:0004111,3.38e-07,122;UBERON:0002021,3.70e-07,10;UBERON:0000411,3.70e-07,10;UBERON:0001950,3.70e-07,10 | |||
|phase1_expression=4.32401887182944,0.348975407639361,0.454999239389536,0,0,0.33575854382378,1.86890112476421,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,2.21112554392781,0,0,0.159992422793407,0,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0.997407872150954,0.816677425049476,0,0,0,0,0,0,1.76255545165808,1.01376931219515,0.734187008646726,3.9119567217402,1.30815093828268,3.95435128922049,2.3331587888914,1.25987779462826,0,0,0,0,1.28629718017973,4.29800159908135,2.06268836910977,6.87875966922632,4.7609188134483,5.07065122804943,2.71075625655306,3.55717918444456,0.449949858640699,0,0,3.59520132622086,4.61061966385865,4.45865332926454,5.94026128659439,4.41682418837902,4.28476476605705,4.8591079009355,6.61450315760752,4.12135525378416,6.43453150627015,1.10115880999389,6.2566795661742,4.76180253094355,3.95658863190582,6.58711033937349,2.08365348222704,5.30447698102624,5.06486349028512,5.95913166329559,4.12480019663135,4.8406371471695,6.52398060388552,0.530083353332288,0.68014404096107,0,0,0.679971333707751,0,0,0,0.421333260395256,0.511290967734173,0,0,2.53518155598025,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0.505524445014783,0,0.517875767294343,1.03909497345377,1.38788261412909,0.913396434936424,0.691846491768175,0.753613202763113,0.823120949949934,0.628332956648377,0.247194967734374,0.289198713839823,0,2.58826959915855,0.883366073841574,0.484875253135222,0,5.27005434620785,2.09446706813455,0.255457055208591,0,0,0,7.04016005202667,4.57500602818627,14.3245961408665,5.04090528557602,4.34716277461562,4.57133698031032,4.54275536589721,4.07357455401265,0.622034853050465,0.252722758433675,0.841767423545896,0.520481771850815,1.37941262660084,1.80062129805349,1.35634336052144,2.10913147369116,1.5373646434182,2.52994656311268,2.84573707812917,0.862271971731369,1.32374256117473,2.63926686245923,5.47989331068937,2.22437799380478,0.696504333044333,1.23469281844766,1.39323986772945,0,0,0,0.828503090142008,0.703578179943289,0.540186184383045,0.710234206755631,0.196764231747404,0.308534225774757,0.232533944750408,0.804820204198858,0.700592054203017,0.987359099480883,1.80584210487005,1.21603214318784,0.877199924551994,0.878200461164203,0.805238512562231,5.46753866266731,9.36431972651488,0,0,1.49301775374664,2.78684006232526,2.06187938115349,1.21010114774006,1.33426826306922,1.33157938278791,0.474529061544512,2.9645811850322,1.75934646160189,3.18330355265841,0.58489226135736,0,1.08069024937347,0.199141273254367,0.948339504765408,0.571242563048644,1.1270773567308,0.407302655690628,0.775809948670503,0.771494018793504,1.96033265085198,0.295220295959204,0.156998727841375,0.123397163921801,0,0,0.786235980452812,0,0.405720242777006,0.482354319504834,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0,2.03228509183265,0.757965647081939,1.79261474086228,1.52770577197669,0.704070744865506,1.67506257441816,0.714130922658041,1.75620283072019,1.26108115284953,2.6575762757853,2.87018583583477,1.14704320301017,1.72684981865896,1.01254341007058,0,0,0,1.10374698521893,2.88991061978026,2.46144541843627,1.80328439914343,0.757412781613119,0.94652465824877,0.780877488593277,1.07711698866399,0.477937595905104,0.445597348164788,1.41538265394416,0.404810701674894,0.584511715822624,0.790575555893047,9.3183181762324,0.709700426041343,2.31485284767432,2.93196526836437,1.48473110675282,1.32745138339963,0.728341908464944,1.51161778482376,1.13163047853539,1.47650946440386,0.922305443831782,3.10113951801865,1.09060118843252,1.78248689192361,3.16036757935816,3.16255825724996,0,1.70219802876894,1.8006109403131,1.29358683782755,1.71469628025274,1.41872186913819,1.60531935841864,1.97458824722545,2.74018454203139,0.23467170806371,0.42366414172764,0.882113592219848,0.49465875882444,2.58343082713449,1.86970067277283,1.67121281604391,0.984845398470368,0.291480836629851,3.8939313422207,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0.954670618015114,0.949007980743406,3.25311147402958,1.51207477150522,1.88179466413022,1.9652630737156,2.02296519577231,2.56225712748541,0.523511883968059,1.29614973291793,1.24267862617385,0.56369293868419,0.747582730219894,1.15820943319968,0.583353565032143,2.58319646955462,2.70329800785245,2.46450201156083,3.6457227756306,2.30690557736564,1.20792060413003,0.864090018773596,0.316011120628178,1.41907650703115,0.616265742988964,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0.100966449948148,0,0.201652370273681,0.0974578807397524,0,0,0.906921534460845,0.443971906748129,0,0,3.28422309854724,1.50145980360946,0.915758121336325,0.857473516316263,0.501572104035363,4.51801474093653,3.68260189205742,5.15605962095457,6.70227411140382,5.48066015816514,6.0431511791176,2.02506750069542,5.40385443869065,4.07828168085784,5.69536342927002,0.830298780673413,1.19707462020309,1.70733605754134,1.45864030240976,2.72497111416377,1.65459157605013,1.77797382241292,2.47242068686673,2.24643446714271,3.28506375292937,1.2673964994512,2.45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| |||
|short_description=p2@Il17d | |||
}} |
Revision as of 13:33, 4 August 2015
Short description: | p2@Il17d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Il17d_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -204bp_to_ENSMUST00000089492_5end |
EntrezGene: | 239114 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.93e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.93e-14 | 23 |
ectodermal cell | 3.31e-09 | 44 |
neurectodermal cell | 3.31e-09 | 44 |
neural cell | 6.43e-09 | 43 |
neuron | 1.17e-08 | 33 |
neuronal stem cell | 1.17e-08 | 33 |
neuroblast | 1.17e-08 | 33 |
electrically signaling cell | 1.17e-08 | 33 |
electrically responsive cell | 1.19e-08 | 39 |
electrically active cell | 1.19e-08 | 39 |