FFCP PHASE1:Mm9::chr17:34056624..34056635,+: Difference between revisions
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{{FFCP|EntrezGene=21356|HGNC=|MCL_coexpression_id=718|UniProt=|association_with_transcript=167bp_to_ENSMUST00000172888_5end|description=CAGE_peak_2_at_Tapbp_5end|id=chr17:34056624..34056635,+|ontology_enrichment_celltype=CL:0000063!4.96e-14!66;CL:0002320!6.01e-10!46;CL:0000134!6.01e-10!46;CL:0000219!3.82e-09!54;CL:0000738!6.27e-08!17;CL:0002087!6.27e-08!17;CL:0002031!1.30e-07!25;CL:0000988!1.97e-07!32;CL:0002032!1.97e-07!32;CL:0000037!1.97e-07!32;CL:0000566!1.97e-07!32;CL:0000837!1.97e-07!32;CL:0000838!9.21e-07!12|ontology_enrichment_celltype_v019_2=CL:0002320,5.38e-12,46;CL:0000134,5.38e-12,46;CL:0000219,6.77e-11,54;CL:0002031,1.09e-09,25;CL:0000988,2.09e-09,32;CL:0002032,2.09e-09,32;CL:0000037,2.09e-09,32;CL:0000837,2.09e-09,32;CL:0000738,4.89e-09,17;CL:0002087,4.89e-09,17;CL:0000838,1.33e-07,12;CL:0000084,5.72e-07,11;CL:0000827,5.72e-07,11;CL:0000791,9.46e-07,9;CL:0000789,9.46e-07,9;CL:0002420,9.46e-07,9;CL:0002419,9.46e-07,9;CL:0000790,9.46e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.12e-18!48;UBERON:0002390!2.41e-16!45;UBERON:0003061!2.41e-16!45;UBERON:0002405!6.37e-16!70;UBERON:0004119!6.94e-13!130;UBERON:0000925!6.94e-13!130;UBERON:0006595!6.94e-13!130;UBERON:0001007!2.13e-12!128;UBERON:0001555!2.13e-12!128;UBERON:0007026!2.13e-12!128;UBERON:0004921!1.79e-11!126;UBERON:0004185!1.79e-11!126;UBERON:0002384!6.01e-10!46;UBERON:0000490!1.08e-09!66;UBERON:0004177!1.23e-09!29;UBERON:0003929!1.60e-09!55;UBERON:0003081!4.64e-09!88;UBERON:0004923!6.84e-09!24;UBERON:0000072!1.26e-08!27;UBERON:0006562!1.48e-08!24;UBERON:0001557!1.48e-08!24;UBERON:0001042!1.48e-08!24;UBERON:0008814!1.48e-08!24;UBERON:0009145!1.48e-08!24;UBERON:0002370!2.11e-08!23;UBERON:0000974!2.11e-08!23;UBERON:0004807!2.11e-08!23;UBERON:0005058!2.11e-08!23;UBERON:0003351!2.11e-08!23;UBERON:0009113!2.11e-08!23;UBERON:0003295!2.11e-08!23;UBERON:0009722!2.11e-08!23;UBERON:0005562!2.11e-08!23;UBERON:0007690!2.11e-08!23;UBERON:0003408!2.91e-08!24;UBERON:0005911!3.18e-08!69;UBERON:0005057!4.00e-08!51;UBERON:0002371!1.10e-07!16;UBERON:0000344!1.50e-07!15;UBERON:0000063!2.30e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.94e-21,48;UBERON:0002405,8.94e-21,48;UBERON:0002390,1.01e-18,45;UBERON:0003061,1.01e-18,45;UBERON:0004119,4.94e-17,118;UBERON:0000925,4.94e-17,118;UBERON:0006595,4.94e-17,118;UBERON:0001007,1.94e-16,116;UBERON:0001555,1.94e-16,116;UBERON:0007026,1.94e-16,116;UBERON:0004921,2.84e-15,114;UBERON:0002384,5.38e-12,46;UBERON:0000077,1.64e-11,35;UBERON:0004177,6.18e-11,29;UBERON:0005057,6.18e-11,29;UBERON:0000072,9.17e-10,27;UBERON:0000490,9.33e-10,66;UBERON:0006562,1.10e-09,24;UBERON:0001557,1.10e-09,24;UBERON:0001042,1.10e-09,24;UBERON:0008814,1.10e-09,24;UBERON:0009145,1.10e-09,24;UBERON:0003081,1.17e-09,87;UBERON:0004923,1.36e-09,24;UBERON:0002370,1.67e-09,23;UBERON:0000974,1.67e-09,23;UBERON:0004807,1.67e-09,23;UBERON:0005058,1.67e-09,23;UBERON:0003351,1.67e-09,23;UBERON:0009113,1.67e-09,23;UBERON:0003295,1.67e-09,23;UBERON:0009722,1.67e-09,23;UBERON:0005562,1.67e-09,23;UBERON:0007690,1.67e-09,23;UBERON:0003929,1.81e-09,55;UBERON:0003408,2.43e-09,24;UBERON:0000160,9.00e-09,31;UBERON:0002371,1.13e-08,16;UBERON:0005911,2.29e-08,69;UBERON:0005409,4.65e-08,47;UBERON:0000344,5.60e-08,15;UBERON:0000065,1.88e-07,41;UBERON:0001004,2.00e-07,42;UBERON:0002204,4.30e-07,32;UBERON:0001041,5.33e-07,80|phase1_expression=0,27.9180326111489,27.2999543633722,18.7527811010235,16.5295590882295,6.04365378882803,5.37309073369709,16.6569087239633,9.43284438416167,15.4482587372516,3.08192342805909,4.86610169871552,12.497653284978,17.2218192765425,4.66353666541928,2.83465374345756,1.39912375625629,15.930839350591,11.6547268564878,11.4585205985468,2.21112554392781,1.78723712161594,4.17919662622297,11.8394392867121,12.6175104586944,17.8011908875656,16.7997178502039,17.0222273821852,5.32065574477847,12.6015064879965,9.97787297948871,0,0,0,2.88851619751275,1.16364251750945,0.816677425049476,4.18531630736908,3.906676722619,3.66466620781659,6.47054636834116,2.73218193983378,2.42755176515577,3.9028013572429,4.46058497365864,3.12029478674859,10.9534788208725,1.30815093828268,1.09843091367236,1.1665793944457,0.839918529752175,2.87505128729943,11.7447824240415,14.5072428402269,10.4189077734164,0.514518872071894,0.85960031981627,1.54701627683233,0,0,0,0.677689064138264,4.4464739805557,23.3973926493164,28.6771245144423,26.9982443679518,5.09320187881288,4.99483796918021,0,0,0,0,0.662605622854841,0,0,0,0,0.383062014255563,0.307213066512487,0,0,0,0.837548997004143,0,0.30559649555362,0.883885756421003,0,0.186399445825301,0.151452386666368,0.151143120213571,3.47837386442013,1.72084775396277,1.3599426674155,1.61910957491345,3.24888208723835,1.79210754838934,2.10666630197628,1.02258193546835,2.07828803682295,2.47337702157238,0,1.28326477414318,2.54805239706646,7.11066703153331,1.73192832808971,1.52015919285059,2.52762222507392,3.88225191044804,9.06282592765101,2.3750742250372,0.173485326766136,0.304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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21356 | |||
|HGNC= | |||
|MCL_coexpression_id=718 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=167bp_to_ENSMUST00000172888_5end | |||
|cluster_id=chr17:34056624..34056635,+ | |||
|description=CAGE_peak_2_at_Tapbp_5end | |||
|id=chr17:34056624..34056635,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.96e-14!66;CL:0002320!6.01e-10!46;CL:0000134!6.01e-10!46;CL:0000219!3.82e-09!54;CL:0000738!6.27e-08!17;CL:0002087!6.27e-08!17;CL:0002031!1.30e-07!25;CL:0000988!1.97e-07!32;CL:0002032!1.97e-07!32;CL:0000037!1.97e-07!32;CL:0000566!1.97e-07!32;CL:0000837!1.97e-07!32;CL:0000838!9.21e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,5.38e-12,46;CL:0000134,5.38e-12,46;CL:0000219,6.77e-11,54;CL:0002031,1.09e-09,25;CL:0000988,2.09e-09,32;CL:0002032,2.09e-09,32;CL:0000037,2.09e-09,32;CL:0000837,2.09e-09,32;CL:0000738,4.89e-09,17;CL:0002087,4.89e-09,17;CL:0000838,1.33e-07,12;CL:0000084,5.72e-07,11;CL:0000827,5.72e-07,11;CL:0000791,9.46e-07,9;CL:0000789,9.46e-07,9;CL:0002420,9.46e-07,9;CL:0002419,9.46e-07,9;CL:0000790,9.46e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.12e-18!48;UBERON:0002390!2.41e-16!45;UBERON:0003061!2.41e-16!45;UBERON:0002405!6.37e-16!70;UBERON:0004119!6.94e-13!130;UBERON:0000925!6.94e-13!130;UBERON:0006595!6.94e-13!130;UBERON:0001007!2.13e-12!128;UBERON:0001555!2.13e-12!128;UBERON:0007026!2.13e-12!128;UBERON:0004921!1.79e-11!126;UBERON:0004185!1.79e-11!126;UBERON:0002384!6.01e-10!46;UBERON:0000490!1.08e-09!66;UBERON:0004177!1.23e-09!29;UBERON:0003929!1.60e-09!55;UBERON:0003081!4.64e-09!88;UBERON:0004923!6.84e-09!24;UBERON:0000072!1.26e-08!27;UBERON:0006562!1.48e-08!24;UBERON:0001557!1.48e-08!24;UBERON:0001042!1.48e-08!24;UBERON:0008814!1.48e-08!24;UBERON:0009145!1.48e-08!24;UBERON:0002370!2.11e-08!23;UBERON:0000974!2.11e-08!23;UBERON:0004807!2.11e-08!23;UBERON:0005058!2.11e-08!23;UBERON:0003351!2.11e-08!23;UBERON:0009113!2.11e-08!23;UBERON:0003295!2.11e-08!23;UBERON:0009722!2.11e-08!23;UBERON:0005562!2.11e-08!23;UBERON:0007690!2.11e-08!23;UBERON:0003408!2.91e-08!24;UBERON:0005911!3.18e-08!69;UBERON:0005057!4.00e-08!51;UBERON:0002371!1.10e-07!16;UBERON:0000344!1.50e-07!15;UBERON:0000063!2.30e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.94e-21,48;UBERON:0002405,8.94e-21,48;UBERON:0002390,1.01e-18,45;UBERON:0003061,1.01e-18,45;UBERON:0004119,4.94e-17,118;UBERON:0000925,4.94e-17,118;UBERON:0006595,4.94e-17,118;UBERON:0001007,1.94e-16,116;UBERON:0001555,1.94e-16,116;UBERON:0007026,1.94e-16,116;UBERON:0004921,2.84e-15,114;UBERON:0002384,5.38e-12,46;UBERON:0000077,1.64e-11,35;UBERON:0004177,6.18e-11,29;UBERON:0005057,6.18e-11,29;UBERON:0000072,9.17e-10,27;UBERON:0000490,9.33e-10,66;UBERON:0006562,1.10e-09,24;UBERON:0001557,1.10e-09,24;UBERON:0001042,1.10e-09,24;UBERON:0008814,1.10e-09,24;UBERON:0009145,1.10e-09,24;UBERON:0003081,1.17e-09,87;UBERON:0004923,1.36e-09,24;UBERON:0002370,1.67e-09,23;UBERON:0000974,1.67e-09,23;UBERON:0004807,1.67e-09,23;UBERON:0005058,1.67e-09,23;UBERON:0003351,1.67e-09,23;UBERON:0009113,1.67e-09,23;UBERON:0003295,1.67e-09,23;UBERON:0009722,1.67e-09,23;UBERON:0005562,1.67e-09,23;UBERON:0007690,1.67e-09,23;UBERON:0003929,1.81e-09,55;UBERON:0003408,2.43e-09,24;UBERON:0000160,9.00e-09,31;UBERON:0002371,1.13e-08,16;UBERON:0005911,2.29e-08,69;UBERON:0005409,4.65e-08,47;UBERON:0000344,5.60e-08,15;UBERON:0000065,1.88e-07,41;UBERON:0001004,2.00e-07,42;UBERON:0002204,4.30e-07,32;UBERON:0001041,5.33e-07,80 | |||
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| |||
|short_description=p2@Tapbp | |||
}} |
Revision as of 16:05, 4 August 2015
Short description: | p2@Tapbp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tapbp_5end |
Coexpression cluster: | MCL_coexpression_mm9:718 |
Association with transcript: | 167bp_to_ENSMUST00000172888_5end |
EntrezGene: | 21356 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 5.38e-12 | 46 |
mesenchymal cell | 5.38e-12 | 46 |
motile cell | 6.77e-11 | 54 |
hematopoietic lineage restricted progenitor cell | 1.09e-09 | 25 |
hematopoietic cell | 2.09e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.09e-09 | 32 |
hematopoietic stem cell | 2.09e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.09e-09 | 32 |
leukocyte | 4.89e-09 | 17 |
nongranular leukocyte | 4.89e-09 | 17 |
lymphoid lineage restricted progenitor cell | 1.33e-07 | 12 |
T cell | 5.72e-07 | 11 |
pro-T cell | 5.72e-07 | 11 |
mature alpha-beta T cell | 9.46e-07 | 9 |
alpha-beta T cell | 9.46e-07 | 9 |
immature T cell | 9.46e-07 | 9 |
mature T cell | 9.46e-07 | 9 |
immature alpha-beta T cell | 9.46e-07 | 9 |