FFCP PHASE1:Mm9::chr17:34115682..34115684,-: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=169|UniProt=|association_with_transcript=48bp_to_ENSMUST00000174250_5end|description=CAGE_peak_1_at_ENSMUST00000174250_5end|id=chr17:34115682..34115684,-|ontology_enrichment_celltype=CL:0000063!2.56e-13!66;CL:0000988!2.37e-09!32;CL:0002032!2.37e-09!32;CL:0000037!2.37e-09!32;CL:0000566!2.37e-09!32;CL:0000837!2.37e-09!32;CL:0000239!1.02e-08!6;CL:0000677!1.02e-08!6;CL:0000212!1.02e-08!6;CL:0000584!1.02e-08!6;CL:0002320!1.03e-08!46;CL:0000134!1.03e-08!46;CL:0000075!2.21e-07!7;CL:0000473!5.41e-07!3;CL:0000627!5.41e-07!3;CL:0000682!5.41e-07!3;CL:0000219!8.88e-07!54|ontology_enrichment_celltype_v019_2=CL:0000239,1.83e-19,6;CL:0000677,1.83e-19,6;CL:0000584,1.83e-19,6;CL:0000682,3.41e-17,3;CL:0000075,8.43e-17,7;CL:0000945,6.50e-14,1;CL:0000236,6.50e-14,1;CL:0000826,6.50e-14,1;CL:0002563,3.07e-13,9;CL:0002251,3.07e-13,9;CL:0000066,1.02e-12,25;CL:0002076,3.23e-08,15;CL:0000473,6.16e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.03e-08!46|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.07e-13,9;UBERON:0004808,3.07e-13,9;UBERON:0001277,3.07e-13,9;UBERON:0000485,5.80e-11,11;UBERON:0001242,2.21e-09,13;UBERON:0001262,2.21e-09,13;UBERON:0004786,2.21e-09,13;UBERON:0000344,3.23e-08,15|phase1_expression=0,2.44282785347553,2.27499619694768,0.60492842261366,0.500895729946347,1.6787927191189,0,0.645616617207881,0,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,0,0.0992909512008853,0.261199789138935,0,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,3.52938892818609,0,0.485510353031154,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0.479260498023681,0.599902730993408,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000174250}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=169 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=48bp_to_ENSMUST00000174250_5end | |||
|cluster_id=chr17:34115682..34115684,- | |||
|description=CAGE_peak_1_at_ENSMUST00000174250_5end | |||
|id=chr17:34115682..34115684,- | |||
|ontology_enrichment_celltype=CL:0000063!2.56e-13!66;CL:0000988!2.37e-09!32;CL:0002032!2.37e-09!32;CL:0000037!2.37e-09!32;CL:0000566!2.37e-09!32;CL:0000837!2.37e-09!32;CL:0000239!1.02e-08!6;CL:0000677!1.02e-08!6;CL:0000212!1.02e-08!6;CL:0000584!1.02e-08!6;CL:0002320!1.03e-08!46;CL:0000134!1.03e-08!46;CL:0000075!2.21e-07!7;CL:0000473!5.41e-07!3;CL:0000627!5.41e-07!3;CL:0000682!5.41e-07!3;CL:0000219!8.88e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.83e-19,6;CL:0000677,1.83e-19,6;CL:0000584,1.83e-19,6;CL:0000682,3.41e-17,3;CL:0000075,8.43e-17,7;CL:0000945,6.50e-14,1;CL:0000236,6.50e-14,1;CL:0000826,6.50e-14,1;CL:0002563,3.07e-13,9;CL:0002251,3.07e-13,9;CL:0000066,1.02e-12,25;CL:0002076,3.23e-08,15;CL:0000473,6.16e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.03e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.07e-13,9;UBERON:0004808,3.07e-13,9;UBERON:0001277,3.07e-13,9;UBERON:0000485,5.80e-11,11;UBERON:0001242,2.21e-09,13;UBERON:0001262,2.21e-09,13;UBERON:0004786,2.21e-09,13;UBERON:0000344,3.23e-08,15 | |||
|phase1_expression=0,2.44282785347553,2.27499619694768,0.60492842261366,0.500895729946347,1.6787927191189,0,0.645616617207881,0,0.234064526321993,0,0,0.171200729931206,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,0,0.0992909512008853,0.261199789138935,0,0.45881856213434,1.14846392823004,1.29228598847722,0.646413698057667,0,0,0,0,0,0,0,0,0,0,0,0,3.52938892818609,0,0.485510353031154,0,0,0,0,0,0,0,0,0,2.34895648480831,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0.860423876981386,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0.247194967734374,0,0,0,0,0,0,0,0.209446706813455,0,0.479260498023681,0.599902730993408,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000174250 | |||
}} |
Latest revision as of 16:23, 4 August 2015
Short description: | p1@ENSMUST00000174250 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000174250_5end |
Coexpression cluster: | MCL_coexpression_mm9:169 |
Association with transcript: | 48bp_to_ENSMUST00000174250_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.83e-19 | 6 |
gut absorptive cell | 1.83e-19 | 6 |
enterocyte | 1.83e-19 | 6 |
M cell of gut | 3.41e-17 | 3 |
columnar/cuboidal epithelial cell | 8.43e-17 | 7 |
lymphocyte of B lineage | 6.50e-14 | 1 |
B cell | 6.50e-14 | 1 |
pro-B cell | 6.50e-14 | 1 |
intestinal epithelial cell | 3.07e-13 | 9 |
epithelial cell of alimentary canal | 3.07e-13 | 9 |
epithelial cell | 1.02e-12 | 25 |
endo-epithelial cell | 3.23e-08 | 15 |
defensive cell | 6.16e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.07e-13 | 9 |
gastrointestinal system epithelium | 3.07e-13 | 9 |
intestinal epithelium | 3.07e-13 | 9 |
simple columnar epithelium | 5.80e-11 | 11 |
intestinal mucosa | 2.21e-09 | 13 |
wall of intestine | 2.21e-09 | 13 |
gastrointestinal system mucosa | 2.21e-09 | 13 |
mucosa | 3.23e-08 | 15 |