FFCP PHASE1:Mm9::chr4:119959590..119959593,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=924|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:119959590..119959593,-|id=chr4:119959590..119959593,-|ontology_enrichment_celltype=CL:0000117!3.11e-13!23;CL:0000337!3.11e-13!23;CL:0002609!7.74e-12!6;CL:0000540!7.30e-11!33;CL:0000047!7.30e-11!33;CL:0000031!7.30e-11!33;CL:0000404!7.30e-11!33;CL:0000393!1.61e-08!39;CL:0000211!1.61e-08!39;CL:0002319!2.14e-08!43;CL:0000221!4.20e-08!44;CL:0000133!4.20e-08!44|ontology_enrichment_celltype_v019_2=CL:0002609,1.98e-20,6;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0002610,7.15e-11,3;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!6.13e-15!49;UBERON:0000955!1.67e-14!50;UBERON:0006238!1.67e-14!50;UBERON:0002780!1.24e-13!39;UBERON:0001890!1.24e-13!39;UBERON:0006240!1.24e-13!39;UBERON:0001049!1.69e-13!52;UBERON:0005068!1.69e-13!52;UBERON:0006241!1.69e-13!52;UBERON:0007135!1.69e-13!52;UBERON:0001017!2.97e-13!73;UBERON:0005743!2.97e-13!73;UBERON:0003080!3.75e-13!40;UBERON:0000073!1.09e-12!75;UBERON:0001016!1.09e-12!75;UBERON:0002791!1.38e-12!29;UBERON:0003528!1.38e-12!29;UBERON:0001893!1.38e-12!29;UBERON:0000033!3.97e-12!63;UBERON:0003056!6.96e-12!49;UBERON:0002020!1.65e-11!34;UBERON:0004121!3.72e-11!102;UBERON:0000924!3.72e-11!102;UBERON:0006601!3.72e-11!102;UBERON:0002346!6.49e-11!71;UBERON:0003075!6.49e-11!71;UBERON:0007284!6.49e-11!71;UBERON:0000956!9.18e-09!21;UBERON:0001869!9.18e-09!21;UBERON:0000203!9.18e-09!21;UBERON:0007811!9.36e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0004684,7.15e-11,3;UBERON:0002275,7.15e-11,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,3.24014251996058,0.630974884054146,0,0.220868540951614,0.489963196859816,0.670918297127655,0.919218786610021,1.10115880999389,0,0,0.263772575460388,0.365950574409639,0.52091337055676,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0.330916980914195,0,0,0,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0|short_description=p@chr4:119959590..119959593,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=924 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:119959590..119959593,- | |||
|description=CAGE_peak_at_chr4:119959590..119959593,- | |||
|id=chr4:119959590..119959593,- | |||
|ontology_enrichment_celltype=CL:0000117!3.11e-13!23;CL:0000337!3.11e-13!23;CL:0002609!7.74e-12!6;CL:0000540!7.30e-11!33;CL:0000047!7.30e-11!33;CL:0000031!7.30e-11!33;CL:0000404!7.30e-11!33;CL:0000393!1.61e-08!39;CL:0000211!1.61e-08!39;CL:0002319!2.14e-08!43;CL:0000221!4.20e-08!44;CL:0000133!4.20e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,1.98e-20,6;CL:0000117,2.24e-12,23;CL:0000337,2.24e-12,23;CL:0002610,7.15e-11,3;CL:0000540,6.05e-09,33;CL:0000047,6.05e-09,33;CL:0000031,6.05e-09,33;CL:0000404,6.05e-09,33;CL:0000393,1.01e-07,39;CL:0000211,1.01e-07,39;CL:0002319,4.30e-07,43;CL:0000221,5.93e-07,44;CL:0000133,5.93e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!6.13e-15!49;UBERON:0000955!1.67e-14!50;UBERON:0006238!1.67e-14!50;UBERON:0002780!1.24e-13!39;UBERON:0001890!1.24e-13!39;UBERON:0006240!1.24e-13!39;UBERON:0001049!1.69e-13!52;UBERON:0005068!1.69e-13!52;UBERON:0006241!1.69e-13!52;UBERON:0007135!1.69e-13!52;UBERON:0001017!2.97e-13!73;UBERON:0005743!2.97e-13!73;UBERON:0003080!3.75e-13!40;UBERON:0000073!1.09e-12!75;UBERON:0001016!1.09e-12!75;UBERON:0002791!1.38e-12!29;UBERON:0003528!1.38e-12!29;UBERON:0001893!1.38e-12!29;UBERON:0000033!3.97e-12!63;UBERON:0003056!6.96e-12!49;UBERON:0002020!1.65e-11!34;UBERON:0004121!3.72e-11!102;UBERON:0000924!3.72e-11!102;UBERON:0006601!3.72e-11!102;UBERON:0002346!6.49e-11!71;UBERON:0003075!6.49e-11!71;UBERON:0007284!6.49e-11!71;UBERON:0000956!9.18e-09!21;UBERON:0001869!9.18e-09!21;UBERON:0000203!9.18e-09!21;UBERON:0007811!9.36e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,7.15e-11,3;UBERON:0002275,7.15e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,1.14058573539325,3.24014251996058,0.630974884054146,0,0.220868540951614,0.489963196859816,0.670918297127655,0.919218786610021,1.10115880999389,0,0,0.263772575460388,0.365950574409639,0.52091337055676,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0.292255857911312,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0.330916980914195,0,0,0,0.234714477291508,0.2604087696879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p@chr4:119959590..119959593,- | |||
}} |
Latest revision as of 16:25, 4 August 2015
Short description: | p@chr4:119959590..119959593, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119959590..119959593, - |
Coexpression cluster: | MCL_coexpression_mm9:924 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 1.98e-20 | 6 |
CNS neuron (sensu Vertebrata) | 2.24e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.24e-12 | 23 |
raphe nuclei neuron | 7.15e-11 | 3 |
neuron | 6.05e-09 | 33 |
neuronal stem cell | 6.05e-09 | 33 |
neuroblast | 6.05e-09 | 33 |
electrically signaling cell | 6.05e-09 | 33 |
electrically responsive cell | 1.01e-07 | 39 |
electrically active cell | 1.01e-07 | 39 |
neural cell | 4.30e-07 | 43 |
ectodermal cell | 5.93e-07 | 44 |
neurectodermal cell | 5.93e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 7.15e-11 | 3 |
reticular formation | 7.15e-11 | 3 |