FFCP PHASE1:Mm9::chr4:123289346..123289350,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=136|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:123289346..123289350,-|id=chr4:123289346..123289350,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!2.34e-11!66;UBERON:0002048!5.52e-09!14;UBERON:0000117!5.52e-09!14;UBERON:0000171!5.52e-09!14;UBERON:0000170!5.52e-09!14;UBERON:0005597!5.52e-09!14;UBERON:0000118!5.52e-09!14;UBERON:0000468!7.67e-09!333;UBERON:0000922!7.74e-09!328;UBERON:0000466!1.76e-08!79;UBERON:0005177!2.18e-08!85;UBERON:0005153!8.20e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.41e-10,66;UBERON:0002048,1.48e-10,14;UBERON:0000117,1.48e-10,14;UBERON:0000171,1.48e-10,14;UBERON:0000170,1.48e-10,14;UBERON:0005597,1.48e-10,14;UBERON:0000118,1.48e-10,14;UBERON:0005177,1.63e-08,79;UBERON:0005153,1.06e-07,17;UBERON:0005178,1.06e-07,17;UBERON:0005181,1.06e-07,17;UBERON:0002224,1.06e-07,17;UBERON:0000915,1.06e-07,17;UBERON:0008947,1.06e-07,17;UBERON:0003258,1.06e-07,17|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,1.21485160433896,0,0.315462165358238,0,0,2.46625541438102,0.198581902401771,0,0.159992422793407,0.45881856213434,0,0.430761996159075,0,0.380046838912748,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.872100625521786,0.219686182734472,0.58328969722285,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.286533439938757,2.06268836910977,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0,0,0,0.734944795289724,0.383381884072945,0,0,0,0.153606533256243,0,0.548925861614458,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.931997229126503,0.075726193333184,0.151143120213571,3.47837386442013,0.860423876981386,0.679971333707751,1.61910957491345,1.29955283489534,0,0.702222100658759,0,0,0,0.704217098883403,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.776813650941515,0.593768556259299,0.520455980298408,0.913396434936424,0.922461989024234,0.753613202763113,1.52865319276416,0.376999773989026,1.73036477414062,0.433798070759735,0,0.323533699894818,0.441683036920787,0.969750506270444,3.72783522436244,2.04946557908083,2.93225389538837,0.255457055208591,0,0,0,1.04853447583376,0.457500602818626,0.753926112677186,0.869121600961382,0.255715457330331,0.62336413367868,0.973447578406546,0.611036183101898,0.622034853050465,1.26361379216837,0.631325567659422,0.780722657776222,0.459804208866946,0.180062129805349,2.41127708537144,2.04109497453984,2.43416068541215,2.52994656311268,1.55222022443409,0.862271971731369,0.945530400839096,0.879755620819744,0,2.22437799380478,0.348252166522167,1.4404749548556,1.39323986772945,0,0,0,1.44988040774851,1.17263029990548,1.62055855314913,0.473489471170421,0.393528463494808,1.3884040159864,1.62773761325285,1.07309360559848,1.98501082024188,0.16455984991348,0.985004784474571,0.56748166682099,1.46199987425332,0.878200461164203,0.939444931322602,0.630869845692382,0.92614151141356,1.65209391491899,0.264450566663544,0.639864751605702,1.39342003116263,0.257734922644187,0.605050573870028,0.667134131534611,0.570676878337677,0,0.164698954724011,1.00534083520108,0.994782360205754,1.36474860983384,0.898819408654221,1.51296634912286,0.796565093017469,0.379335801906163,1.48523066392647,0,1.83286195060783,3.29719228184964,1.61312385747733,2.02356918797623,2.21415221969403,2.19798218977925,1.35736880313981,1.48226313543574,0.166845105716094,1.17935397067922,1.12431056192427,0.811440485554012,1.4470629585145,1.01850340712568,2.87696137450811,1.29708181420028,0.823684239564244,10.0637744569148,2.23284568601102,3.43241440426017,1.76805214562978,1.61457672169721,1.4473305640901,3.32555742299888,0.757965647081939,1.30371981153621,3.90413697282933,5.63256595892405,6.03022526790537,11.9021820443007,13.6593553500459,15.4482441224067,19.710357378741,13.3942005672289,12.7813385478276,13.8147985492716,14.7542039753142,1.50791283939272,0.54390568381871,0.491764273019036,0.275936746304732,0.481651769963376,1.17211686592203,0,1.00988370881749,0,0.390438744296638,1.07711698866399,0.955875191810208,0,0,0.404810701674894,0.584511715822624,0,1.92792789853084,0.567760340833074,0.534196811001766,0.162886959353576,0,0,0.728341908464944,0.906970670894253,0.943025398779491,0,1.53717573971964,1.55056975900933,1.45413491791002,1.06949213515416,0.948110273807448,0,0,1.02131881726136,1.8006109403131,0.129358683782755,1.07168517515796,0.709360934569094,0,1.15184314421485,0.608929898229199,0.938686832254841,2.96564899209348,0.220528398054962,1.81374878235628,1.61464426695906,1.44751019827574,2.50681922406587,2.29797259643086,1.45740418314925,0.556275906031529,1.02522528478712,0.82554747185289,2.03713980106683,2.63715839806567,1.0935538217682,1.37266903923914,0,0,0,1.90934123603023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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=136 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:123289346..123289350,- | |||
|description=CAGE_peak_at_chr4:123289346..123289350,- | |||
|id=chr4:123289346..123289350,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!2.34e-11!66;UBERON:0002048!5.52e-09!14;UBERON:0000117!5.52e-09!14;UBERON:0000171!5.52e-09!14;UBERON:0000170!5.52e-09!14;UBERON:0005597!5.52e-09!14;UBERON:0000118!5.52e-09!14;UBERON:0000468!7.67e-09!333;UBERON:0000922!7.74e-09!328;UBERON:0000466!1.76e-08!79;UBERON:0005177!2.18e-08!85;UBERON:0005153!8.20e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009569,1.41e-10,66;UBERON:0002048,1.48e-10,14;UBERON:0000117,1.48e-10,14;UBERON:0000171,1.48e-10,14;UBERON:0000170,1.48e-10,14;UBERON:0005597,1.48e-10,14;UBERON:0000118,1.48e-10,14;UBERON:0005177,1.63e-08,79;UBERON:0005153,1.06e-07,17;UBERON:0005178,1.06e-07,17;UBERON:0005181,1.06e-07,17;UBERON:0002224,1.06e-07,17;UBERON:0000915,1.06e-07,17;UBERON:0008947,1.06e-07,17;UBERON:0003258,1.06e-07,17 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,1.21485160433896,0,0.315462165358238,0,0,2.46625541438102,0.198581902401771,0,0.159992422793407,0.45881856213434,0,0.430761996159075,0,0.380046838912748,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.183546752161682,0,0.872100625521786,0.219686182734472,0.58328969722285,0.139986421625363,0,0.167782606057736,0,0.336093799142464,0.514518872071894,0.286533439938757,2.06268836910977,0.404632921719196,0,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0.675029691658453,0,0,0,0.734944795289724,0.383381884072945,0,0,0,0.153606533256243,0,0.548925861614458,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.931997229126503,0.075726193333184,0.151143120213571,3.47837386442013,0.860423876981386,0.679971333707751,1.61910957491345,1.29955283489534,0,0.702222100658759,0,0,0,0.704217098883403,1.28326477414318,0,0,0.216491041011214,0.506719730950197,0,0.45673551887624,0.776813650941515,0.593768556259299,0.520455980298408,0.913396434936424,0.922461989024234,0.753613202763113,1.52865319276416,0.376999773989026,1.73036477414062,0.433798070759735,0,0.323533699894818,0.441683036920787,0.969750506270444,3.72783522436244,2.04946557908083,2.93225389538837,0.255457055208591,0,0,0,1.04853447583376,0.457500602818626,0.753926112677186,0.869121600961382,0.255715457330331,0.62336413367868,0.973447578406546,0.611036183101898,0.622034853050465,1.26361379216837,0.631325567659422,0.780722657776222,0.459804208866946,0.180062129805349,2.41127708537144,2.04109497453984,2.43416068541215,2.52994656311268,1.55222022443409,0.862271971731369,0.945530400839096,0.879755620819744,0,2.22437799380478,0.348252166522167,1.4404749548556,1.39323986772945,0,0,0,1.44988040774851,1.17263029990548,1.62055855314913,0.473489471170421,0.393528463494808,1.3884040159864,1.62773761325285,1.07309360559848,1.98501082024188,0.16455984991348,0.985004784474571,0.56748166682099,1.46199987425332,0.878200461164203,0.939444931322602,0.630869845692382,0.92614151141356,1.65209391491899,0.264450566663544,0.639864751605702,1.39342003116263,0.257734922644187,0.605050573870028,0.667134131534611,0.570676878337677,0,0.164698954724011,1.00534083520108,0.994782360205754,1.36474860983384,0.898819408654221,1.51296634912286,0.796565093017469,0.379335801906163,1.48523066392647,0,1.83286195060783,3.29719228184964,1.61312385747733,2.02356918797623,2.21415221969403,2.19798218977925,1.35736880313981,1.48226313543574,0.166845105716094,1.17935397067922,1.12431056192427,0.811440485554012,1.4470629585145,1.01850340712568,2.87696137450811,1.29708181420028,0.823684239564244,10.0637744569148,2.23284568601102,3.43241440426017,1.76805214562978,1.61457672169721,1.4473305640901,3.32555742299888,0.757965647081939,1.30371981153621,3.90413697282933,5.63256595892405,6.03022526790537,11.9021820443007,13.6593553500459,15.4482441224067,19.710357378741,13.3942005672289,12.7813385478276,13.8147985492716,14.7542039753142,1.50791283939272,0.54390568381871,0.491764273019036,0.275936746304732,0.481651769963376,1.17211686592203,0,1.00988370881749,0,0.390438744296638,1.07711698866399,0.955875191810208,0,0,0.404810701674894,0.584511715822624,0,1.92792789853084,0.567760340833074,0.534196811001766,0.162886959353576,0,0,0.728341908464944,0.906970670894253,0.943025398779491,0,1.53717573971964,1.55056975900933,1.45413491791002,1.06949213515416,0.948110273807448,0,0,1.02131881726136,1.8006109403131,0.129358683782755,1.07168517515796,0.709360934569094,0,1.15184314421485,0.608929898229199,0.938686832254841,2.96564899209348,0.220528398054962,1.81374878235628,1.61464426695906,1.44751019827574,2.50681922406587,2.29797259643086,1.45740418314925,0.556275906031529,1.02522528478712,0.82554747185289,2.03713980106683,2.63715839806567,1.0935538217682,1.37266903923914,0,0,0,1.90934123603023,0.158167996790568,0.609958401380546,1.72808545314882,1.46361807210128,1.74690050996942,2.15782954215713,1.57041565878138,2.6175594198403,1.16653475962614,0.621339313086926,0.56369293868419,0.448549638131936,0.66183396182839,0.583353565032143,1.29159823477731,0.844780627453891,0.704143431874524,1.43224823328345,1.57289016638566,3.14059357073808,2.30424005006292,0.316011120628178,0.608175645870493,0.513554785824136,0.909445760844565,0.358053391334963,0.39736270956253,0.480781798079875,0.590758108698309,0.706765149637033,0.304827226619999,0.302478555410522,0.292373642219257,0.384847366561318,0,0.906921534460845,0.221985953374065,0.0897138566094757,0.167884616364078,0.772758376128762,0.187682475451182,0,0.643105137237198,2.50786052017682,0,0.920650473014354,1.14579102687879,1.3748254587495,0,0,0.675022500231806,0.45032120322422,0.453142408984205,1.03552062350364,0.31136204275253,1.19707462020309,1.36586884603307,1.45864030240976,0.209613162627982,0,1.77797382241292,2.67845574410562,1.28367683836726,3.28506375292937,2.02783439912192,1.32038438970253,1.49826411951812,1.79270426733634,0.80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| |||
|short_description=p@chr4:123289346..123289350,- | |||
}} |
Latest revision as of 17:23, 4 August 2015
Short description: | p@chr4:123289346..123289350, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:123289346..123289350, - |
Coexpression cluster: | MCL_coexpression_mm9:136 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subdivision of trunk | 1.41e-10 | 66 |
lung | 1.48e-10 | 14 |
respiratory tube | 1.48e-10 | 14 |
respiration organ | 1.48e-10 | 14 |
pair of lungs | 1.48e-10 | 14 |
lung primordium | 1.48e-10 | 14 |
lung bud | 1.48e-10 | 14 |
trunk region element | 1.63e-08 | 79 |
epithelial bud | 1.06e-07 | 17 |
thoracic cavity element | 1.06e-07 | 17 |
thoracic segment organ | 1.06e-07 | 17 |
thoracic cavity | 1.06e-07 | 17 |
thoracic segment of trunk | 1.06e-07 | 17 |
respiratory primordium | 1.06e-07 | 17 |
endoderm of foregut | 1.06e-07 | 17 |