FFCP PHASE1:Mm9::chr7:19857297..19857302,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=517|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:19857297..19857302,+|id=chr7:19857297..19857302,+|ontology_enrichment_celltype=CL:0000063!4.12e-13!66;CL:0002563!4.74e-07!9;CL:0002251!4.74e-07!9;CL:0000988!6.02e-07!32;CL:0002032!6.02e-07!32;CL:0000037!6.02e-07!32;CL:0000566!6.02e-07!32;CL:0000837!6.02e-07!32|ontology_enrichment_celltype_v019_2=CL:0002076,1.48e-14,15;CL:0002563,1.72e-13,9;CL:0002251,1.72e-13,9;CL:0000066,1.92e-13,25;CL:0000223,8.47e-12,20;CL:0000239,2.17e-09,6;CL:0000677,2.17e-09,6;CL:0000584,2.17e-09,6;CL:0002320,2.53e-08,46;CL:0000134,2.53e-08,46;CL:0000988,4.75e-08,32;CL:0002032,4.75e-08,32;CL:0000037,4.75e-08,32;CL:0000837,4.75e-08,32;CL:0000075,7.01e-08,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!1.28e-10!24;UBERON:0000344!4.22e-10!15;UBERON:0001242!5.62e-09!13;UBERON:0000060!5.62e-09!13;UBERON:0001262!5.62e-09!13;UBERON:0004786!5.62e-09!13;UBERON:0002193!1.85e-07!48;UBERON:0000485!3.67e-07!11;UBERON:0003350!4.74e-07!9;UBERON:0004808!4.74e-07!9;UBERON:0001277!4.74e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.21e-20,15;UBERON:0001242,1.17e-17,13;UBERON:0001262,1.17e-17,13;UBERON:0004786,1.17e-17,13;UBERON:0004923,5.86e-14,24;UBERON:0003350,1.72e-13,9;UBERON:0004808,1.72e-13,9;UBERON:0001277,1.72e-13,9;UBERON:0000485,1.36e-10,11;UBERON:0000160,1.65e-09,31;UBERON:0002384,2.53e-08,46;UBERON:0005409,4.66e-07,47|phase1_expression=0.640595388419176,4.88565570695105,4.09499315450582,9.67885476181856,13.5241847085514,2.18243053485457,2.10251376535973,0.774739940649458,10.559154161375,8.89445200023575,1.54096171402954,1.19658238493005,0.856003649656029,0.786783621770977,0.999329285446988,0,0,1.26184866143295,0.548457734422955,0.42438965179803,0.17008658030214,0.496454756004426,1.30599894569468,2.3998863419011,3.21172993494038,4.01962374880514,2.15380998079537,2.37018355954478,1.71021077510736,3.2763916868791,2.21730510655305,1.90509202037889,3.07532393792285,0,8.95440021228951,3.15845826181135,8.16677425049476,5.02237956884289,3.906676722619,4.71171369576418,12.3528612486513,4.78131839470912,4.85510353031154,0.629484089877886,0.811015449756117,0.183546752161682,0,0,0.878744730937887,0.194429899074283,0.139986421625363,0,3.18786951509699,0,1.00828139742739,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,1.0165335962074,0.889294796111139,1.3498495759221,1.97773272513395,0.7104801149461,0.898800331555214,0.768436610643109,0,0.135005938331691,0.420649922702764,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.151143120213571,3.18850937571846,0,0,0,0,0,0.421333260395256,0.681721290312231,0.519572009205738,1.41335829804136,0.845060518660083,1.28326477414318,0,0,2.16491041011214,2.78695852022608,1.51657333504435,0.34255163915718,0.517875767294343,0.29688427812965,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0.647067399789637,0.662524555381181,0,5.59175283654366,0.292780797011547,0,0.766371165625774,1.7972268675888,2.99951365496704,2.03312363316904,0,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0.248813941220186,0.758168275301024,0,0.390361328888111,0,0.360124259610698,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0,0,1.23469281844766,0.398068533636986,1.40442637462647,1.28673953557358,0.852490498186778,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.697601834251224,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,1.32167513193519,0.793351699990633,0.213288250535234,0.464473343720877,0.257734922644187,0.605050573870028,0.667134131534611,1.71203063501303,0.474529061544512,0.658795818896044,1.25667604400135,0.795825888164603,0.58489226135736,0,0,0.995706366271836,0.948339504765408,0.456994050438915,0,0.610953983535943,0.387904974335251,0.140271639780637,0.379419222745544,0,0,0.370191491765402,0.889357881261447,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0,0.25462585178142,0.575392274901621,0.162135226775035,0,2.87536413054709,0,0,0,0.179397413521912,0,0.554259570499814,0.37898282354097,0.162964976442026,0.509235257325564,0.234690248288502,0,1.19021820443007,0.585400943573396,0.472905432318573,0.221464689648775,0.637819074629948,0.163863314715738,0.518054945597687,0.578596234326046,4.52373851817817,3.80733978673097,1.47529281905711,0.551873492609465,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0.390438744296638,0.430846795465598,0.477937595905104,0.891194696329576,1.13230612315533,0,0.584511715822624,0.3952877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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=517 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:19857297..19857302,+ | |||
|description=CAGE_peak_at_chr7:19857297..19857302,+ | |||
|id=chr7:19857297..19857302,+ | |||
|ontology_enrichment_celltype=CL:0000063!4.12e-13!66;CL:0002563!4.74e-07!9;CL:0002251!4.74e-07!9;CL:0000988!6.02e-07!32;CL:0002032!6.02e-07!32;CL:0000037!6.02e-07!32;CL:0000566!6.02e-07!32;CL:0000837!6.02e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.48e-14,15;CL:0002563,1.72e-13,9;CL:0002251,1.72e-13,9;CL:0000066,1.92e-13,25;CL:0000223,8.47e-12,20;CL:0000239,2.17e-09,6;CL:0000677,2.17e-09,6;CL:0000584,2.17e-09,6;CL:0002320,2.53e-08,46;CL:0000134,2.53e-08,46;CL:0000988,4.75e-08,32;CL:0002032,4.75e-08,32;CL:0000037,4.75e-08,32;CL:0000837,4.75e-08,32;CL:0000075,7.01e-08,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.28e-10!24;UBERON:0000344!4.22e-10!15;UBERON:0001242!5.62e-09!13;UBERON:0000060!5.62e-09!13;UBERON:0001262!5.62e-09!13;UBERON:0004786!5.62e-09!13;UBERON:0002193!1.85e-07!48;UBERON:0000485!3.67e-07!11;UBERON:0003350!4.74e-07!9;UBERON:0004808!4.74e-07!9;UBERON:0001277!4.74e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.21e-20,15;UBERON:0001242,1.17e-17,13;UBERON:0001262,1.17e-17,13;UBERON:0004786,1.17e-17,13;UBERON:0004923,5.86e-14,24;UBERON:0003350,1.72e-13,9;UBERON:0004808,1.72e-13,9;UBERON:0001277,1.72e-13,9;UBERON:0000485,1.36e-10,11;UBERON:0000160,1.65e-09,31;UBERON:0002384,2.53e-08,46;UBERON:0005409,4.66e-07,47 | |||
|phase1_expression=0.640595388419176,4.88565570695105,4.09499315450582,9.67885476181856,13.5241847085514,2.18243053485457,2.10251376535973,0.774739940649458,10.559154161375,8.89445200023575,1.54096171402954,1.19658238493005,0.856003649656029,0.786783621770977,0.999329285446988,0,0,1.26184866143295,0.548457734422955,0.42438965179803,0.17008658030214,0.496454756004426,1.30599894569468,2.3998863419011,3.21172993494038,4.01962374880514,2.15380998079537,2.37018355954478,1.71021077510736,3.2763916868791,2.21730510655305,1.90509202037889,3.07532393792285,0,8.95440021228951,3.15845826181135,8.16677425049476,5.02237956884289,3.906676722619,4.71171369576418,12.3528612486513,4.78131839470912,4.85510353031154,0.629484089877886,0.811015449756117,0.183546752161682,0,0,0.878744730937887,0.194429899074283,0.139986421625363,0,3.18786951509699,0,1.00828139742739,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,1.0165335962074,0.889294796111139,1.3498495759221,1.97773272513395,0.7104801149461,0.898800331555214,0.768436610643109,0,0.135005938331691,0.420649922702764,0,0,0,0.0958454710182364,0,0,0.127687338085188,0,0.131886287730194,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.151143120213571,3.18850937571846,0,0,0,0,0,0.421333260395256,0.681721290312231,0.519572009205738,1.41335829804136,0.845060518660083,1.28326477414318,0,0,2.16491041011214,2.78695852022608,1.51657333504435,0.34255163915718,0.517875767294343,0.29688427812965,0.173485326766136,0.304465478312141,0.922461989024234,0.452167921657868,0.470354828542819,0.125666591329675,0.247194967734374,0,0,0.647067399789637,0.662524555381181,0,5.59175283654366,0.292780797011547,0,0.766371165625774,1.7972268675888,2.99951365496704,2.03312363316904,0,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0.248813941220186,0.758168275301024,0,0.390361328888111,0,0.360124259610698,0.150704817835715,0,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0.189106080167819,0.351902248327898,0.219195732427575,0,0,1.23469281844766,0.398068533636986,1.40442637462647,1.28673953557358,0.852490498186778,0.207125772535502,0,0.36012412292203,0.23674473558521,0.393528463494808,0.462801338662135,0.697601834251224,0.268273401399619,0.116765342367169,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,1.32167513193519,0.793351699990633,0.213288250535234,0.464473343720877,0.257734922644187,0.605050573870028,0.667134131534611,1.71203063501303,0.474529061544512,0.658795818896044,1.25667604400135,0.795825888164603,0.58489226135736,0,0,0.995706366271836,0.948339504765408,0.456994050438915,0,0.610953983535943,0.387904974335251,0.140271639780637,0.379419222745544,0,0,0.370191491765402,0.889357881261447,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0,0.25462585178142,0.575392274901621,0.162135226775035,0,2.87536413054709,0,0,0,0.179397413521912,0,0.554259570499814,0.37898282354097,0.162964976442026,0.509235257325564,0.234690248288502,0,1.19021820443007,0.585400943573396,0.472905432318573,0.221464689648775,0.637819074629948,0.163863314715738,0.518054945597687,0.578596234326046,4.52373851817817,3.80733978673097,1.47529281905711,0.551873492609465,0.160550589987792,0.234423373184406,0,0.757412781613119,0,0.390438744296638,0.430846795465598,0.477937595905104,0.891194696329576,1.13230612315533,0,0.584511715822624,0.395287777946524,0,0.567760340833074,0.178065603667255,0.325773918707152,0.659880491890142,0,0.242780636154981,0,0.377210159511796,1.77181135728464,0.922305443831782,0.258428293168221,0.363533729477506,0,0,0,0,0.680879211507576,0.18006109403131,0,1.28602221018955,0,0.356737635204141,0.329098041204242,0.304464949114599,1.40803024838226,0.63549621259146,0.220528398054962,0.32977250588296,0.161464426695906,0.422190474497091,0.238744688006273,0.164140899745061,1.1659233465194,0.556275906031529,0.854354403989263,0.206386867963223,0.925972636848558,0.941842285023455,0.956859594047176,1.37266903923914,1.18984900995699,1.11961161858926,0.829199842826543,0,0.474503990371703,0,0.756037385752609,0.209088296014469,0.655087691238533,0.404593039154462,0.165306911450672,1.57053565190418,1.68499465279331,1.24267862617385,0,0.299033092087958,0,0,0.258319646955462,0.337912250981556,0.117357238645754,0.39061315453185,0.314578033277133,0.724752362478018,0,0.316011120628178,0.810900861160657,0.308132871494482,0.51968329191118,0.716106782669926,0.993406773906324,0.240390899039938,0.590758108698309,0.201932899896295,0.228620419965,0.806609481094724,0.584747284438515,0.384847366561318,1.28564592399726,0.226730383615211,0.443971906748129,1.16628013592318,0.671538465456314,0.386379188064381,0.375364950902364,0.73260649706906,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0.551530525350042,0,0.206035057238894,0.3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| |||
|short_description=p@chr7:19857297..19857302,+ | |||
}} |
Latest revision as of 17:40, 4 August 2015
Short description: | p@chr7:19857297..19857302, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:19857297..19857302, + |
Coexpression cluster: | MCL_coexpression_mm9:517 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.48e-14 | 15 |
intestinal epithelial cell | 1.72e-13 | 9 |
epithelial cell of alimentary canal | 1.72e-13 | 9 |
epithelial cell | 1.92e-13 | 25 |
endodermal cell | 8.47e-12 | 20 |
brush border epithelial cell | 2.17e-09 | 6 |
gut absorptive cell | 2.17e-09 | 6 |
enterocyte | 2.17e-09 | 6 |
connective tissue cell | 2.53e-08 | 46 |
mesenchymal cell | 2.53e-08 | 46 |
hematopoietic cell | 4.75e-08 | 32 |
hematopoietic oligopotent progenitor cell | 4.75e-08 | 32 |
hematopoietic stem cell | 4.75e-08 | 32 |
hematopoietic multipotent progenitor cell | 4.75e-08 | 32 |
columnar/cuboidal epithelial cell | 7.01e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.21e-20 | 15 |
intestinal mucosa | 1.17e-17 | 13 |
wall of intestine | 1.17e-17 | 13 |
gastrointestinal system mucosa | 1.17e-17 | 13 |
organ component layer | 5.86e-14 | 24 |
epithelium of mucosa | 1.72e-13 | 9 |
gastrointestinal system epithelium | 1.72e-13 | 9 |
intestinal epithelium | 1.72e-13 | 9 |
simple columnar epithelium | 1.36e-10 | 11 |
intestine | 1.65e-09 | 31 |
connective tissue | 2.53e-08 | 46 |
gastrointestinal system | 4.66e-07 | 47 |