FFCP PHASE1:Mm9::chr4:127645730..127645740,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:127645730..127645740,+|id=chr4:127645730..127645740,+|ontology_enrichment_celltype=CL:0000223!1.48e-09!20;CL:0000066!2.35e-09!25;CL:0000239!1.36e-07!6;CL:0000677!1.36e-07!6;CL:0000212!1.36e-07!6;CL:0000584!1.36e-07!6;CL:0002076!8.46e-07!15|ontology_enrichment_celltype_v019_2=CL:0000068,6.38e-15,3;CL:0002202,6.38e-15,3;CL:0000069,6.38e-15,3;CL:0002632,6.38e-15,3;CL:0002368,6.38e-15,3;CL:0000307,6.38e-15,3;CL:0000377,6.38e-15,3;CL:0000066,3.22e-11,25;CL:0000223,4.63e-11,20;CL:0002076,5.50e-11,15;CL:0000239,1.21e-07,6;CL:0000677,1.21e-07,6;CL:0000584,1.21e-07,6;CL:0000349,1.64e-07,3;CL:0000351,1.64e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!9.04e-19!130;UBERON:0000925!9.04e-19!130;UBERON:0006595!9.04e-19!130;UBERON:0001007!2.93e-17!128;UBERON:0001555!2.93e-17!128;UBERON:0007026!2.93e-17!128;UBERON:0004921!1.43e-15!126;UBERON:0004185!1.43e-15!126;UBERON:0000160!6.47e-12!43;UBERON:0005409!8.58e-11!59;UBERON:0000344!3.20e-10!15;UBERON:0004923!7.96e-10!24;UBERON:0003929!3.63e-08!55;UBERON:0001242!5.64e-08!13;UBERON:0000060!5.64e-08!13;UBERON:0001262!5.64e-08!13;UBERON:0004786!5.64e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.38e-15,3;UBERON:0001005,6.38e-15,3;UBERON:0007196,6.38e-15,3;UBERON:0001558,6.38e-15,3;UBERON:0004923,1.22e-11,24;UBERON:0000344,3.07e-11,15;UBERON:0001962,6.66e-11,2;UBERON:0001961,6.66e-11,2;UBERON:0001744,6.66e-11,2;UBERON:0001155,7.94e-10,2;UBERON:0000059,7.94e-10,2;UBERON:0002465,1.52e-07,3;UBERON:0000358,1.64e-07,3;UBERON:0000307,1.64e-07,3;UBERON:0007010,1.64e-07,3|phase1_expression=0,0.697950815278722,0.909998478779072,3.0246421130683,3.50627010962443,0.16787927191189,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47959840805055,7.57050627521661,0,0.430761996159075,1.72376986148711,8.7410772949932,0.504060259519861,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,9.51959867190851,0.539703191637817,0,0.448026887097336,0,0,0,0,0,0,0,0,4.11332977921307,6.33399663687746,4.04419556011827,0.22836775943812,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0.257734922644187,0,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0.58489226135736,0.898819408654221,0.864552199498777,0,0.189667900953082,0,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.42366414172764,0.220528398054962,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.269728692769641,0,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,5.77163478772568,0.448569283047378,9.06576928366024,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:127645730..127645740,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:127645730..127645740,+ | |||
|description=CAGE_peak_at_chr4:127645730..127645740,+ | |||
|id=chr4:127645730..127645740,+ | |||
|ontology_enrichment_celltype=CL:0000223!1.48e-09!20;CL:0000066!2.35e-09!25;CL:0000239!1.36e-07!6;CL:0000677!1.36e-07!6;CL:0000212!1.36e-07!6;CL:0000584!1.36e-07!6;CL:0002076!8.46e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.38e-15,3;CL:0002202,6.38e-15,3;CL:0000069,6.38e-15,3;CL:0002632,6.38e-15,3;CL:0002368,6.38e-15,3;CL:0000307,6.38e-15,3;CL:0000377,6.38e-15,3;CL:0000066,3.22e-11,25;CL:0000223,4.63e-11,20;CL:0002076,5.50e-11,15;CL:0000239,1.21e-07,6;CL:0000677,1.21e-07,6;CL:0000584,1.21e-07,6;CL:0000349,1.64e-07,3;CL:0000351,1.64e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!9.04e-19!130;UBERON:0000925!9.04e-19!130;UBERON:0006595!9.04e-19!130;UBERON:0001007!2.93e-17!128;UBERON:0001555!2.93e-17!128;UBERON:0007026!2.93e-17!128;UBERON:0004921!1.43e-15!126;UBERON:0004185!1.43e-15!126;UBERON:0000160!6.47e-12!43;UBERON:0005409!8.58e-11!59;UBERON:0000344!3.20e-10!15;UBERON:0004923!7.96e-10!24;UBERON:0003929!3.63e-08!55;UBERON:0001242!5.64e-08!13;UBERON:0000060!5.64e-08!13;UBERON:0001262!5.64e-08!13;UBERON:0004786!5.64e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.38e-15,3;UBERON:0001005,6.38e-15,3;UBERON:0007196,6.38e-15,3;UBERON:0001558,6.38e-15,3;UBERON:0004923,1.22e-11,24;UBERON:0000344,3.07e-11,15;UBERON:0001962,6.66e-11,2;UBERON:0001961,6.66e-11,2;UBERON:0001744,6.66e-11,2;UBERON:0001155,7.94e-10,2;UBERON:0000059,7.94e-10,2;UBERON:0002465,1.52e-07,3;UBERON:0000358,1.64e-07,3;UBERON:0000307,1.64e-07,3;UBERON:0007010,1.64e-07,3 | |||
|phase1_expression=0,0.697950815278722,0.909998478779072,3.0246421130683,3.50627010962443,0.16787927191189,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.47959840805055,7.57050627521661,0,0.430761996159075,1.72376986148711,8.7410772949932,0.504060259519861,0,0.635030673459631,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,9.51959867190851,0.539703191637817,0,0.448026887097336,0,0,0,0,0,0,0,0,4.11332977921307,6.33399663687746,4.04419556011827,0.22836775943812,0,0,0,0,0,0,0,0,1.48316980640624,0,0,0,0,0,1.86391761218122,0,0,1.53274233125155,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0.505445516867349,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.793351699990633,0,0,0.257734922644187,0,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0.58489226135736,0.898819408654221,0.864552199498777,0,0.189667900953082,0,0,0,0,0,0,0,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.624075346229121,0,0.179397413521912,0,0,0,0.162964976442026,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604647113929502,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.42366414172764,0.220528398054962,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0,0,0.269728692769641,0,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513554785824136,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0,5.77163478772568,0.448569283047378,9.06576928366024,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.64183841918363,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:127645730..127645740,+ | |||
}} |
Latest revision as of 18:49, 4 August 2015
Short description: | p@chr4:127645730..127645740, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:127645730..127645740, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.38e-15 | 3 |
epithelial cell of tracheobronchial tree | 6.38e-15 | 3 |
branched duct epithelial cell | 6.38e-15 | 3 |
epithelial cell of lower respiratory tract | 6.38e-15 | 3 |
respiratory epithelial cell | 6.38e-15 | 3 |
tracheal epithelial cell | 6.38e-15 | 3 |
tracheoblast | 6.38e-15 | 3 |
epithelial cell | 3.22e-11 | 25 |
endodermal cell | 4.63e-11 | 20 |
endo-epithelial cell | 5.50e-11 | 15 |
brush border epithelial cell | 1.21e-07 | 6 |
gut absorptive cell | 1.21e-07 | 6 |
enterocyte | 1.21e-07 | 6 |
extraembryonic cell | 1.64e-07 | 3 |
trophoblast cell | 1.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.38e-15 | 3 |
respiratory airway | 6.38e-15 | 3 |
tracheobronchial tree | 6.38e-15 | 3 |
lower respiratory tract | 6.38e-15 | 3 |
organ component layer | 1.22e-11 | 24 |
mucosa | 3.07e-11 | 15 |
gut-associated lymphoid tissue | 6.66e-11 | 2 |
mucosa-associated lymphoid tissue | 6.66e-11 | 2 |
lymphoid tissue | 6.66e-11 | 2 |
colon | 7.94e-10 | 2 |
large intestine | 7.94e-10 | 2 |
lymphoid system | 1.52e-07 | 3 |
blastocyst | 1.64e-07 | 3 |
blastula | 1.64e-07 | 3 |
cleaving embryo | 1.64e-07 | 3 |