FFCP PHASE1:Mm9::chr4:134881232..134881242,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=51796|HGNC=|UniProt=|association_with_transcript=-468bp_to_ENSMUST00000136570_5end|description=CAGE_peak_3_at_Srrm1_5end|id=chr4:134881232..134881242,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!4.19e-09!147;UBERON:0000926!1.84e-08!193;UBERON:0004120!1.84e-08!193;UBERON:0006603!1.84e-08!193;UBERON:0000077!2.97e-07!97;UBERON:0001041!3.59e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0001048,7.15e-09,134;UBERON:0001041,1.65e-07,80|phase1_expression=0.80074423552397,0,0,0,0,0.503637815735669,0.700837921786577,1.67860320474049,2.111830832275,1.17032263160997,1.19852577757853,1.19658238493005,1.02720437958723,1.13646523144697,6.66219523631325,3.84703008040669,2.79824751251259,1.57731082679119,1.64537320326887,1.27316895539409,1.61582251287033,0.893618560807968,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.886922042621219,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0.485510353031154,0.629484089877886,0.304130793658544,0.734187008646726,0,0,0,0,0,0,2.01339127269284,3.62681071005672,3.02484419228218,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.725827286159344,0.540023753326763,0,0,0,0.122490799214954,0.479227355091182,0,1.10115880999389,0.893811366596314,0,0.527545150920775,0.182975287204819,1.04182674111352,0,0,0.763991238884051,0,0.427115042397309,0.745597783301202,0.302904773332736,0.0755715601067855,0.869593466105033,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0,1.26759077799012,0,2.54805239706646,0,0.865964164044856,0,0,0.68510327831436,1.8125651855302,1.1875371125186,1.38788261412909,0.608930956624282,0.922461989024234,0.452167921657868,1.41106448562846,0.628332956648377,1.23597483867187,0.433798070759735,1.76922110389975,0.161766849947409,2.87093973998512,2.90925151881133,0,1.46390398505774,2.30391377494801,1.02182822083437,0.958520996047362,0.599902730993408,0.381210681219194,0.748953197024114,0.457500602818626,0.251308704225729,0.869121600961382,0,0.41557608911912,0.486723789203273,0.81471491080253,1.7416975885413,3.79084137650512,1.89397670297827,2.08192708740326,0.229902104433473,0.540186389416048,1.50704817835715,1.29269348387523,2.562274405697,1.12442069471675,2.06962696591213,0.646703978798527,1.51284864134255,1.05570674498369,1.31517439456545,2.78047249225598,1.0447564995665,1.4404749548556,2.38841120182192,0.702213187313235,0.772043721344145,1.42081749697796,1.65700618028402,0.234526059981096,1.08037236876609,1.65721314909647,0.983821158737019,0.617068451549513,0.465067889500816,0.804820204198858,0.467061369468678,1.6455984991348,2.62667942526552,0.56748166682099,0.584799949701329,1.09775057645525,0.268412837520744,0.841159794256509,0.823236899034275,2.97376904685418,1.05780226665418,0.639864751605702,1.39342003116263,1.28867461322093,1.00841762311671,1.55664630691409,0.951128130562796,2.37264530772256,1.64698954724011,1.25667604400135,0.994782360205754,0.779856348476481,5.39291645192533,1.94524244887225,0.796565093017469,0.569003702859245,1.14248512609729,1.1270773567308,1.01825663922657,1.55161989734101,0.911765658574141,1.13825766823663,2.21415221969403,2.19798218977925,1.35736880313981,1.1858105083486,1.50160595144485,1.17935397067922,3.37293168577281,1.42002084971952,1.92941727801933,2.29163266603278,3.16465751195892,3.24270453550071,1.92192989231657,5.75072826109418,0.744281895337007,2.18426371180192,0.252578877947112,0.896987067609561,0.482443521363367,0.923765950833023,0.947457058852424,1.79261474086228,1.52770577197669,2.34690248288502,1.34005005953453,1.42826184531608,1.75620283072019,1.41871629695572,1.10732344824387,1.43509291791738,2.78567635016755,1.03610989119537,1.88043776155965,3.01582567878545,0.54390568381871,2.45882136509518,2.20749397043786,0.321101179975584,0.703270119553219,0,0.757412781613119,1.26203287766503,0.390438744296638,0.430846795465598,0.716906393857656,0,0,0.809621403349789,1.46127928955656,0.395287777946524,0.321321316421807,0.567760340833074,0.534196811001766,0.977321756121456,0.989820737835213,1.32745138339963,0.728341908464944,1.209294227859,1.32023555829129,0,1.22974059177571,1.03371317267288,0.727067458955011,1.42598951353889,2.84433082142234,1.05418608574999,1.03135543248187,2.7235168460303,1.62054984628179,1.16422815404479,1.71469628025274,0.532020700926821,2.14042581122485,1.64549020602121,0.608929898229199,0.704015124191131,1.69465656691056,0.882113592219848,1.31909002353184,2.26050197374268,0.965006798850494,1.3130957840345,0.984845398470368,2.33184669303881,0.370850604021019,3.41741761595705,1.03193433981611,1.29636169158798,5.08594833912666,4.37421528707281,2.0590035588587,0.679913719975421,0.979660166265606,0.829199842826543,6.68269432610579,0.632671987162271,0.813277868507395,1.18805874903981,2.29997125615916,1.9652630737156,0.674321731924103,1.1571483801547,1.04702376793612,1.16653475962614,2.4853572523477,0.56369293868419,1.94371509857172,1.65458490457098,2.91676782516071,1.54991788173277,1.68956125490778,1.29092962510329,1.0416350787516,1.04859344425711,1.69108884578204,1.44015003128933,3.16011120628178,0.608175645870493,1.54066435747241,1.16928740680016,1.43221356533985,0.79472541912506,2.16351809135944,3.2491695978407,1.81739609906666,1.98137697303,2.92395936896837,3.02119430293232,2.79014340756955,2.22066114144981,1.13365191807606,0,0.807424709485281,0.839423081820392,1.54551675225752,0.93841237725591,1.46521299413812,0.857473516316263,1.50471631210609,0,0,0,0.68741272937475,0,0,0.675022500231806,0,0.453142408984205,0,0.726511433089237,0.399024873401031,0.853668028770671,3.16038732188782,0.838452650511929,0.367687016900028,1.11123363900808,1.64828045791115,0.962757628775446,1.01078884705519,1.52087579934144,1.32038438970253,1.49826411951812,1.60062881012173,1.55075766180156,0.952587382566147,1.97003354106254,1.15745532278223,0.824171801606613,1.32479028120958,3.77156177623957,1.77475806159337,0.715308569841963,1.88950341622027,1.69396884747595,1.94613598150856,2.74391959309159,2.10455769150274,1.7654534799962,3.36685362994643,0.949080144993393,1.87158516513571,1.22769312950907,1.23949472948773,0.771626443924566,0,0.935726433781634,0.644613162144895,0.57386499620653,0,0.463735671240843|short_description=p3@Srrm1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:51796 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-468bp_to_ENSMUST00000136570_5end | |||
|cluster_id=chr4:134881232..134881242,- | |||
|description=CAGE_peak_3_at_Srrm1_5end | |||
|id=chr4:134881232..134881242,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!4.19e-09!147;UBERON:0000926!1.84e-08!193;UBERON:0004120!1.84e-08!193;UBERON:0006603!1.84e-08!193;UBERON:0000077!2.97e-07!97;UBERON:0001041!3.59e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,7.15e-09,134;UBERON:0001041,1.65e-07,80 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0.503637815735669,0.700837921786577,1.67860320474049,2.111830832275,1.17032263160997,1.19852577757853,1.19658238493005,1.02720437958723,1.13646523144697,6.66219523631325,3.84703008040669,2.79824751251259,1.57731082679119,1.64537320326887,1.27316895539409,1.61582251287033,0.893618560807968,0.261199789138935,0.159992422793407,0.45881856213434,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0.886922042621219,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.408338712524738,0.418531630736908,0,0,0.588231488031014,1.36609096991689,0.485510353031154,0.629484089877886,0.304130793658544,0.734187008646726,0,0,0,0,0,0,2.01339127269284,3.62681071005672,3.02484419228218,0.514518872071894,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0.725827286159344,0.540023753326763,0,0,0,0.122490799214954,0.479227355091182,0,1.10115880999389,0.893811366596314,0,0.527545150920775,0.182975287204819,1.04182674111352,0,0,0.763991238884051,0,0.427115042397309,0.745597783301202,0.302904773332736,0.0755715601067855,0.869593466105033,0,0,0.539703191637817,0,0.448026887097336,0.280888840263504,0.170430322578058,0.259786004602869,0,1.26759077799012,0,2.54805239706646,0,0.865964164044856,0,0,0.68510327831436,1.8125651855302,1.1875371125186,1.38788261412909,0.608930956624282,0.922461989024234,0.452167921657868,1.41106448562846,0.628332956648377,1.23597483867187,0.433798070759735,1.76922110389975,0.161766849947409,2.87093973998512,2.90925151881133,0,1.46390398505774,2.30391377494801,1.02182822083437,0.958520996047362,0.599902730993408,0.381210681219194,0.748953197024114,0.457500602818626,0.251308704225729,0.869121600961382,0,0.41557608911912,0.486723789203273,0.81471491080253,1.7416975885413,3.79084137650512,1.89397670297827,2.08192708740326,0.229902104433473,0.540186389416048,1.50704817835715,1.29269348387523,2.562274405697,1.12442069471675,2.06962696591213,0.646703978798527,1.51284864134255,1.05570674498369,1.31517439456545,2.78047249225598,1.0447564995665,1.4404749548556,2.38841120182192,0.702213187313235,0.772043721344145,1.42081749697796,1.65700618028402,0.234526059981096,1.08037236876609,1.65721314909647,0.983821158737019,0.617068451549513,0.465067889500816,0.804820204198858,0.467061369468678,1.6455984991348,2.62667942526552,0.56748166682099,0.584799949701329,1.09775057645525,0.268412837520744,0.841159794256509,0.823236899034275,2.97376904685418,1.05780226665418,0.639864751605702,1.39342003116263,1.28867461322093,1.00841762311671,1.55664630691409,0.951128130562796,2.37264530772256,1.64698954724011,1.25667604400135,0.994782360205754,0.779856348476481,5.39291645192533,1.94524244887225,0.796565093017469,0.569003702859245,1.14248512609729,1.1270773567308,1.01825663922657,1.55161989734101,0.911765658574141,1.13825766823663,2.21415221969403,2.19798218977925,1.35736880313981,1.1858105083486,1.50160595144485,1.17935397067922,3.37293168577281,1.42002084971952,1.92941727801933,2.29163266603278,3.16465751195892,3.24270453550071,1.92192989231657,5.75072826109418,0.744281895337007,2.18426371180192,0.252578877947112,0.896987067609561,0.482443521363367,0.923765950833023,0.947457058852424,1.79261474086228,1.52770577197669,2.34690248288502,1.34005005953453,1.42826184531608,1.75620283072019,1.41871629695572,1.10732344824387,1.43509291791738,2.78567635016755,1.03610989119537,1.88043776155965,3.01582567878545,0.54390568381871,2.45882136509518,2.20749397043786,0.321101179975584,0.703270119553219,0,0.757412781613119,1.26203287766503,0.390438744296638,0.430846795465598,0.716906393857656,0,0,0.809621403349789,1.46127928955656,0.395287777946524,0.321321316421807,0.567760340833074,0.534196811001766,0.977321756121456,0.989820737835213,1.32745138339963,0.728341908464944,1.209294227859,1.32023555829129,0,1.22974059177571,1.03371317267288,0.727067458955011,1.42598951353889,2.84433082142234,1.05418608574999,1.03135543248187,2.7235168460303,1.62054984628179,1.16422815404479,1.71469628025274,0.532020700926821,2.14042581122485,1.64549020602121,0.608929898229199,0.704015124191131,1.69465656691056,0.882113592219848,1.31909002353184,2.26050197374268,0.965006798850494,1.3130957840345,0.984845398470368,2.33184669303881,0.370850604021019,3.41741761595705,1.03193433981611,1.29636169158798,5.08594833912666,4.37421528707281,2.0590035588587,0.679913719975421,0.979660166265606,0.829199842826543,6.68269432610579,0.632671987162271,0.813277868507395,1.18805874903981,2.29997125615916,1.9652630737156,0.674321731924103,1.1571483801547,1.04702376793612,1.16653475962614,2.4853572523477,0.56369293868419,1.94371509857172,1.65458490457098,2.91676782516071,1.54991788173277,1.68956125490778,1.29092962510329,1.0416350787516,1.04859344425711,1.69108884578204,1.44015003128933,3.16011120628178,0.608175645870493,1.54066435747241,1.16928740680016,1.43221356533985,0.79472541912506,2.16351809135944,3.2491695978407,1.81739609906666,1.98137697303,2.92395936896837,3.02119430293232,2.79014340756955,2.22066114144981,1.13365191807606,0,0.807424709485281,0.839423081820392,1.54551675225752,0.93841237725591,1.46521299413812,0.857473516316263,1.50471631210609,0,0,0,0.68741272937475,0,0,0.675022500231806,0,0.453142408984205,0,0.726511433089237,0.399024873401031,0.853668028770671,3.16038732188782,0.838452650511929,0.367687016900028,1.11123363900808,1.64828045791115,0.962757628775446,1.01078884705519,1.52087579934144,1.32038438970253,1.49826411951812,1.60062881012173,1.55075766180156,0.952587382566147,1.97003354106254,1.15745532278223,0.824171801606613,1.32479028120958,3.77156177623957,1.77475806159337,0.715308569841963,1.88950341622027,1.69396884747595,1.94613598150856,2.74391959309159,2.10455769150274,1.7654534799962,3.36685362994643,0.949080144993393,1.87158516513571,1.22769312950907,1.23949472948773,0.771626443924566,0,0.935726433781634,0.644613162144895,0.57386499620653,0,0.463735671240843 | |||
|short_description=p3@Srrm1 | |||
}} |
Revision as of 23:04, 4 August 2015
Short description: | p3@Srrm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Srrm1_5end |
Coexpression cluster: | NA |
Association with transcript: | -468bp_to_ENSMUST00000136570_5end |
EntrezGene: | 51796 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 7.15e-09 | 134 |
foregut | 1.65e-07 | 80 |