FFCP PHASE1:Mm9::chr2:29701822..29701836,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=293|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:29701822..29701836,-|id=chr2:29701822..29701836,-|ontology_enrichment_celltype=CL:0000117!1.92e-15!23;CL:0000337!1.92e-15!23;CL:0000221!8.43e-11!44;CL:0000133!8.43e-11!44;CL:0002319!3.28e-10!43;CL:0000540!4.04e-10!33;CL:0000047!4.04e-10!33;CL:0000031!4.04e-10!33;CL:0000404!4.04e-10!33;CL:0000055!7.67e-08!50;CL:0000393!1.08e-07!39;CL:0000211!1.08e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-13,23;CL:0000337,1.34e-13,23;CL:0000540,1.90e-08,33;CL:0000047,1.90e-08,33;CL:0000031,1.90e-08,33;CL:0000404,1.90e-08,33;CL:0002319,8.75e-08,43;CL:0000221,1.60e-07,44;CL:0000133,1.60e-07,44;CL:0002614,3.55e-07,3;CL:0002610,5.61e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.37e-28!75;UBERON:0001016!1.37e-28!75;UBERON:0001017!4.49e-27!73;UBERON:0005743!4.49e-27!73;UBERON:0001049!3.80e-24!52;UBERON:0005068!3.80e-24!52;UBERON:0006241!3.80e-24!52;UBERON:0007135!3.80e-24!52;UBERON:0000033!2.96e-22!63;UBERON:0004121!3.96e-22!102;UBERON:0000924!3.96e-22!102;UBERON:0006601!3.96e-22!102;UBERON:0000955!5.68e-22!50;UBERON:0006238!5.68e-22!50;UBERON:0002020!3.04e-21!34;UBERON:0002616!4.80e-21!49;UBERON:0002346!8.11e-19!71;UBERON:0003075!8.11e-19!71;UBERON:0007284!8.11e-19!71;UBERON:0002791!6.35e-16!29;UBERON:0003528!6.35e-16!29;UBERON:0001893!6.35e-16!29;UBERON:0003056!4.67e-15!49;UBERON:0003080!5.34e-15!40;UBERON:0002780!4.82e-14!39;UBERON:0001890!4.82e-14!39;UBERON:0006240!4.82e-14!39;UBERON:0007811!5.25e-13!86;UBERON:0002021!3.17e-12!10;UBERON:0000411!3.17e-12!10;UBERON:0001950!3.17e-12!10;UBERON:0000153!6.60e-11!94;UBERON:0003076!2.27e-10!12;UBERON:0003057!2.27e-10!12;UBERON:0002619!3.96e-10!17;UBERON:0002420!4.68e-09!8;UBERON:0007245!4.68e-09!8;UBERON:0010009!4.68e-09!8;UBERON:0010011!4.68e-09!8;UBERON:0000454!4.68e-09!8;UBERON:0002298!4.99e-09!6;UBERON:0000956!6.43e-09!21;UBERON:0001869!6.43e-09!21;UBERON:0000203!6.43e-09!21;UBERON:0002240!2.34e-08!6;UBERON:0005174!2.34e-08!6;UBERON:0001137!2.34e-08!6;UBERON:0001948!5.10e-07!5;UBERON:0002315!5.10e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.29e-33,73;UBERON:0001016,1.11e-31,75;UBERON:0000073,7.61e-31,54;UBERON:0001049,8.70e-28,52;UBERON:0005068,8.70e-28,52;UBERON:0006241,8.70e-28,52;UBERON:0007135,8.70e-28,52;UBERON:0004121,1.73e-24,95;UBERON:0000924,1.73e-24,95;UBERON:0006601,1.73e-24,95;UBERON:0002346,1.00e-22,64;UBERON:0003075,1.00e-22,64;UBERON:0007284,1.00e-22,64;UBERON:0002020,1.30e-22,34;UBERON:0000955,2.12e-20,47;UBERON:0006238,2.12e-20,47;UBERON:0002616,3.35e-19,46;UBERON:0010371,6.34e-19,73;UBERON:0002021,1.34e-17,10;UBERON:0000411,1.34e-17,10;UBERON:0001950,1.34e-17,10;UBERON:0003528,1.86e-15,29;UBERON:0002791,1.86e-15,29;UBERON:0001893,1.86e-15,29;UBERON:0003076,2.64e-15,12;UBERON:0003057,2.64e-15,12;UBERON:0003080,5.94e-15,40;UBERON:0002780,1.02e-13,39;UBERON:0001890,1.02e-13,39;UBERON:0006240,1.02e-13,39;UBERON:0010314,2.30e-13,92;UBERON:0003056,1.46e-12,49;UBERON:0002240,8.75e-12,6;UBERON:0005174,8.75e-12,6;UBERON:0001137,8.75e-12,6;UBERON:0002619,1.52e-11,17;UBERON:0000956,1.19e-10,21;UBERON:0001869,1.19e-10,21;UBERON:0000203,1.19e-10,21;UBERON:0001948,8.86e-10,5;UBERON:0002315,8.86e-10,5;UBERON:0002950,7.37e-09,4;UBERON:0001891,7.37e-09,4;UBERON:0009616,7.37e-09,4;UBERON:0010286,7.37e-09,4;UBERON:0000025,1.79e-08,114;UBERON:0004111,1.93e-07,122;UBERON:0002038,3.55e-07,3;UBERON:0009663,3.55e-07,3;UBERON:0009661,3.55e-07,3;UBERON:0000125,3.55e-07,3;UBERON:0002308,3.55e-07,3;UBERON:0004684,5.61e-07,3;UBERON:0002275,5.61e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26022798234954,3.1739458756322,4.43681982454325,0,0,0,0,0,11.085204089181,16.9056054341484,0,0,0,140.254633342268,81.721360152097,0.244981598429908,0.191690942036473,0,34.1359231098105,43.4136949489638,28.8780282521738,0.263772575460388,0.182975287204819,0.52091337055676,56.6741487972803,36.5795696520592,36.213184723104,20.0347438122094,11.2473627831291,2.05039390407831,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1751358655196,20.3163305609051,0,0,0,0,27.5614776504874,34.7700458142156,1.25654352112864,14.6012428961512,33.4987249102733,40.7264567336738,63.7608163856288,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0.2562274405697,0,10.3481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.1330783252755,102.67743745477,0,0,0,0,0,0,0,0,0,0,0,9.96096080907602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,134.989619863651,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7556068717899,25.7782132444019,37.2382083735608,29.0431878160832,15.7568979547248,21.1510291269116,24.9758325085768,9.00642406448441,7.25027854374727,11.9084871702919,12.1431196673487,8.37952234142165,2.39027048055788,0,0.419226325255965,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0.644613162144895,1.72159498861959,6.83833399270498,6.72416723299222|short_description=p@chr2:29701822..29701836,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=293 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:29701822..29701836,- | |||
|description=CAGE_peak_at_chr2:29701822..29701836,- | |||
|id=chr2:29701822..29701836,- | |||
|ontology_enrichment_celltype=CL:0000117!1.92e-15!23;CL:0000337!1.92e-15!23;CL:0000221!8.43e-11!44;CL:0000133!8.43e-11!44;CL:0002319!3.28e-10!43;CL:0000540!4.04e-10!33;CL:0000047!4.04e-10!33;CL:0000031!4.04e-10!33;CL:0000404!4.04e-10!33;CL:0000055!7.67e-08!50;CL:0000393!1.08e-07!39;CL:0000211!1.08e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-13,23;CL:0000337,1.34e-13,23;CL:0000540,1.90e-08,33;CL:0000047,1.90e-08,33;CL:0000031,1.90e-08,33;CL:0000404,1.90e-08,33;CL:0002319,8.75e-08,43;CL:0000221,1.60e-07,44;CL:0000133,1.60e-07,44;CL:0002614,3.55e-07,3;CL:0002610,5.61e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.37e-28!75;UBERON:0001016!1.37e-28!75;UBERON:0001017!4.49e-27!73;UBERON:0005743!4.49e-27!73;UBERON:0001049!3.80e-24!52;UBERON:0005068!3.80e-24!52;UBERON:0006241!3.80e-24!52;UBERON:0007135!3.80e-24!52;UBERON:0000033!2.96e-22!63;UBERON:0004121!3.96e-22!102;UBERON:0000924!3.96e-22!102;UBERON:0006601!3.96e-22!102;UBERON:0000955!5.68e-22!50;UBERON:0006238!5.68e-22!50;UBERON:0002020!3.04e-21!34;UBERON:0002616!4.80e-21!49;UBERON:0002346!8.11e-19!71;UBERON:0003075!8.11e-19!71;UBERON:0007284!8.11e-19!71;UBERON:0002791!6.35e-16!29;UBERON:0003528!6.35e-16!29;UBERON:0001893!6.35e-16!29;UBERON:0003056!4.67e-15!49;UBERON:0003080!5.34e-15!40;UBERON:0002780!4.82e-14!39;UBERON:0001890!4.82e-14!39;UBERON:0006240!4.82e-14!39;UBERON:0007811!5.25e-13!86;UBERON:0002021!3.17e-12!10;UBERON:0000411!3.17e-12!10;UBERON:0001950!3.17e-12!10;UBERON:0000153!6.60e-11!94;UBERON:0003076!2.27e-10!12;UBERON:0003057!2.27e-10!12;UBERON:0002619!3.96e-10!17;UBERON:0002420!4.68e-09!8;UBERON:0007245!4.68e-09!8;UBERON:0010009!4.68e-09!8;UBERON:0010011!4.68e-09!8;UBERON:0000454!4.68e-09!8;UBERON:0002298!4.99e-09!6;UBERON:0000956!6.43e-09!21;UBERON:0001869!6.43e-09!21;UBERON:0000203!6.43e-09!21;UBERON:0002240!2.34e-08!6;UBERON:0005174!2.34e-08!6;UBERON:0001137!2.34e-08!6;UBERON:0001948!5.10e-07!5;UBERON:0002315!5.10e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.29e-33,73;UBERON:0001016,1.11e-31,75;UBERON:0000073,7.61e-31,54;UBERON:0001049,8.70e-28,52;UBERON:0005068,8.70e-28,52;UBERON:0006241,8.70e-28,52;UBERON:0007135,8.70e-28,52;UBERON:0004121,1.73e-24,95;UBERON:0000924,1.73e-24,95;UBERON:0006601,1.73e-24,95;UBERON:0002346,1.00e-22,64;UBERON:0003075,1.00e-22,64;UBERON:0007284,1.00e-22,64;UBERON:0002020,1.30e-22,34;UBERON:0000955,2.12e-20,47;UBERON:0006238,2.12e-20,47;UBERON:0002616,3.35e-19,46;UBERON:0010371,6.34e-19,73;UBERON:0002021,1.34e-17,10;UBERON:0000411,1.34e-17,10;UBERON:0001950,1.34e-17,10;UBERON:0003528,1.86e-15,29;UBERON:0002791,1.86e-15,29;UBERON:0001893,1.86e-15,29;UBERON:0003076,2.64e-15,12;UBERON:0003057,2.64e-15,12;UBERON:0003080,5.94e-15,40;UBERON:0002780,1.02e-13,39;UBERON:0001890,1.02e-13,39;UBERON:0006240,1.02e-13,39;UBERON:0010314,2.30e-13,92;UBERON:0003056,1.46e-12,49;UBERON:0002240,8.75e-12,6;UBERON:0005174,8.75e-12,6;UBERON:0001137,8.75e-12,6;UBERON:0002619,1.52e-11,17;UBERON:0000956,1.19e-10,21;UBERON:0001869,1.19e-10,21;UBERON:0000203,1.19e-10,21;UBERON:0001948,8.86e-10,5;UBERON:0002315,8.86e-10,5;UBERON:0002950,7.37e-09,4;UBERON:0001891,7.37e-09,4;UBERON:0009616,7.37e-09,4;UBERON:0010286,7.37e-09,4;UBERON:0000025,1.79e-08,114;UBERON:0004111,1.93e-07,122;UBERON:0002038,3.55e-07,3;UBERON:0009663,3.55e-07,3;UBERON:0009661,3.55e-07,3;UBERON:0000125,3.55e-07,3;UBERON:0002308,3.55e-07,3;UBERON:0004684,5.61e-07,3;UBERON:0002275,5.61e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.26022798234954,3.1739458756322,4.43681982454325,0,0,0,0,0,11.085204089181,16.9056054341484,0,0,0,140.254633342268,81.721360152097,0.244981598429908,0.191690942036473,0,34.1359231098105,43.4136949489638,28.8780282521738,0.263772575460388,0.182975287204819,0.52091337055676,56.6741487972803,36.5795696520592,36.213184723104,20.0347438122094,11.2473627831291,2.05039390407831,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1751358655196,20.3163305609051,0,0,0,0,27.5614776504874,34.7700458142156,1.25654352112864,14.6012428961512,33.4987249102733,40.7264567336738,63.7608163856288,0,0,0,0.631325567659422,0,0,0,0,0.0680364991513279,0.2562274405697,0,10.3481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,62.1330783252755,102.67743745477,0,0,0,0,0,0,0,0,0,0,0,9.96096080907602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0.23467170806371,0,0,0,0,0,0,0,0,134.989619863651,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.7556068717899,25.7782132444019,37.2382083735608,29.0431878160832,15.7568979547248,21.1510291269116,24.9758325085768,9.00642406448441,7.25027854374727,11.9084871702919,12.1431196673487,8.37952234142165,2.39027048055788,0,0.419226325255965,0,0,0.206035057238894,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0.342869252385415,0,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0,0,0,0,0.118635018124174,0,0,0,0,0.249810577937946,0,0.644613162144895,1.72159498861959,6.83833399270498,6.72416723299222 | |||
|short_description=p@chr2:29701822..29701836,- | |||
}} |
Latest revision as of 23:37, 4 August 2015
Short description: | p@chr2:29701822..29701836, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:29701822..29701836, - |
Coexpression cluster: | MCL_coexpression_mm9:293 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.34e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-13 | 23 |
neuron | 1.90e-08 | 33 |
neuronal stem cell | 1.90e-08 | 33 |
neuroblast | 1.90e-08 | 33 |
electrically signaling cell | 1.90e-08 | 33 |
neural cell | 8.75e-08 | 43 |
ectodermal cell | 1.60e-07 | 44 |
neurectodermal cell | 1.60e-07 | 44 |
neuron of the substantia nigra | 3.55e-07 | 3 |
raphe nuclei neuron | 5.61e-07 | 3 |