FFCP PHASE1:Mm9::chr9:35352286..35352290,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2603|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:35352286..35352290,-|id=chr9:35352286..35352290,-|ontology_enrichment_celltype=CL:0000107!2.80e-34!9;CL:0000393!1.72e-08!39;CL:0000211!1.72e-08!39;CL:0000540!2.68e-08!33;CL:0000047!2.68e-08!33;CL:0000031!2.68e-08!33;CL:0000404!2.68e-08!33|ontology_enrichment_celltype_v019_2=CL:0000107,5.98e-35,9;CL:0000393,8.54e-12,39;CL:0000211,8.54e-12,39;CL:0000540,8.00e-10,33;CL:0000047,8.00e-10,33;CL:0000031,8.00e-10,33;CL:0000404,8.00e-10,33;CL:0002319,1.35e-07,43;CL:0000221,1.99e-07,44;CL:0000133,1.99e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!2.80e-34!9;UBERON:0000010!8.52e-28!11;UBERON:0002005!4.32e-13!3;UBERON:0005428!4.32e-13!3;UBERON:0000013!2.33e-12!3;UBERON:0000011!5.07e-12!3;UBERON:0007100!3.44e-07!18;UBERON:0000948!3.44e-07!18;UBERON:0005498!3.44e-07!18;UBERON:0004140!3.44e-07!18;UBERON:0009881!3.44e-07!18;UBERON:0004141!3.44e-07!18;UBERON:0003084!3.44e-07!18;UBERON:0007005!3.44e-07!18;UBERON:0004139!3.44e-07!18;UBERON:0004291!3.44e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0010313,1.17e-38,3;UBERON:0002342,1.17e-38,3;UBERON:0002005,1.17e-38,3;UBERON:0005428,1.17e-38,3;UBERON:0005062,1.17e-38,3;UBERON:0002410,5.98e-35,9;UBERON:0000010,1.07e-28,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34437266846731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,1.44049649168812,0.710234206755631,0.590292695242212,0.308534225774757,0,0,0,0.329119699826961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73262329124385,3.90438744296638,3.66219776145758,1.19484398976276,0.668396022247182,0.283076530788832,2.42886421004937,0.584511715822624,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr9:35352286..35352290,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2603 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:35352286..35352290,- | |||
|description=CAGE_peak_at_chr9:35352286..35352290,- | |||
|id=chr9:35352286..35352290,- | |||
|ontology_enrichment_celltype=CL:0000107!2.80e-34!9;CL:0000393!1.72e-08!39;CL:0000211!1.72e-08!39;CL:0000540!2.68e-08!33;CL:0000047!2.68e-08!33;CL:0000031!2.68e-08!33;CL:0000404!2.68e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,5.98e-35,9;CL:0000393,8.54e-12,39;CL:0000211,8.54e-12,39;CL:0000540,8.00e-10,33;CL:0000047,8.00e-10,33;CL:0000031,8.00e-10,33;CL:0000404,8.00e-10,33;CL:0002319,1.35e-07,43;CL:0000221,1.99e-07,44;CL:0000133,1.99e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!2.80e-34!9;UBERON:0000010!8.52e-28!11;UBERON:0002005!4.32e-13!3;UBERON:0005428!4.32e-13!3;UBERON:0000013!2.33e-12!3;UBERON:0000011!5.07e-12!3;UBERON:0007100!3.44e-07!18;UBERON:0000948!3.44e-07!18;UBERON:0005498!3.44e-07!18;UBERON:0004140!3.44e-07!18;UBERON:0009881!3.44e-07!18;UBERON:0004141!3.44e-07!18;UBERON:0003084!3.44e-07!18;UBERON:0007005!3.44e-07!18;UBERON:0004139!3.44e-07!18;UBERON:0004291!3.44e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010313,1.17e-38,3;UBERON:0002342,1.17e-38,3;UBERON:0002005,1.17e-38,3;UBERON:0005428,1.17e-38,3;UBERON:0005062,1.17e-38,3;UBERON:0002410,5.98e-35,9;UBERON:0000010,1.07e-28,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34437266846731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,1.44049649168812,0.710234206755631,0.590292695242212,0.308534225774757,0,0,0,0.329119699826961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.73262329124385,3.90438744296638,3.66219776145758,1.19484398976276,0.668396022247182,0.283076530788832,2.42886421004937,0.584511715822624,0.790575555893047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:35352286..35352290,- | |||
}} |
Latest revision as of 01:02, 5 August 2015
Short description: | p@chr9:35352286..35352290, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:35352286..35352290, - |
Coexpression cluster: | MCL_coexpression_mm9:2603 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 5.98e-35 | 9 |
electrically responsive cell | 8.54e-12 | 39 |
electrically active cell | 8.54e-12 | 39 |
neuron | 8.00e-10 | 33 |
neuronal stem cell | 8.00e-10 | 33 |
neuroblast | 8.00e-10 | 33 |
electrically signaling cell | 8.00e-10 | 33 |
neural cell | 1.35e-07 | 43 |
ectodermal cell | 1.99e-07 | 44 |
neurectodermal cell | 1.99e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
neural crest-derived structure | 1.17e-38 | 3 |
neural crest | 1.17e-38 | 3 |
enteric nervous system | 1.17e-38 | 3 |
vagal neural crest | 1.17e-38 | 3 |
neural fold | 1.17e-38 | 3 |
autonomic nervous system | 5.98e-35 | 9 |
peripheral nervous system | 1.07e-28 | 11 |