FFCP PHASE1:Mm9::chr17:69505940..69505947,+: Difference between revisions
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{{FFCP|EntrezGene=13823|HGNC=|UniProt=F8WH44,Q9WV92,E9QN88,Q8BGK4,A7YY80|association_with_transcript=-202bp_to_ENSMUST00000024843,ENSMUST00000080208,ENSMUST00000112678,ENSMUST00000112679,ENSMUST00000112680,NM_013813,uc008dko.1,uc008dkp.1,uc008dks.2_5end|description=CAGE_peak_6_at_Epb4.1l3_5end|id=chr17:69505940..69505947,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.63e-09!102;UBERON:0000924!5.63e-09!102;UBERON:0006601!5.63e-09!102;UBERON:0002346!7.35e-09!71;UBERON:0003075!7.35e-09!71;UBERON:0007284!7.35e-09!71;UBERON:0000033!1.02e-07!63;UBERON:0000970!1.06e-07!9;UBERON:0000019!1.06e-07!9;UBERON:0000047!1.06e-07!9;UBERON:0004088!1.06e-07!9;UBERON:0002104!1.06e-07!9;UBERON:0001456!1.06e-07!9;UBERON:0003072!1.06e-07!9;UBERON:0003071!1.06e-07!9;UBERON:0004128!1.06e-07!9;UBERON:0000020!1.42e-07!12;UBERON:0001032!1.42e-07!12;UBERON:0004456!1.42e-07!12;UBERON:0000153!5.33e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.82e-22,9;UBERON:0000019,2.82e-22,9;UBERON:0000047,2.82e-22,9;UBERON:0010312,2.82e-22,9;UBERON:0004088,2.82e-22,9;UBERON:0002104,2.82e-22,9;UBERON:0001456,2.82e-22,9;UBERON:0003072,2.82e-22,9;UBERON:0004128,2.82e-22,9;UBERON:0003071,2.82e-22,9;UBERON:0001444,2.94e-18,11;UBERON:0000020,9.49e-17,12;UBERON:0001032,9.49e-17,12;UBERON:0004456,9.49e-17,12;UBERON:0000033,1.80e-15,13;UBERON:0005085,1.80e-15,13;UBERON:0007811,6.63e-08,36|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0.210324961351382,0.856952953211411,0,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0.56276261003168,0.45839474333043,2.35702868378934,0.284743361598206,0.931997229126503,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,7.11066703153331,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0.62336413367868,0.811206315338788,0.101839363850316,0.124406970610093,0,0.420883711772948,0.780722657776222,1.14951052216736,1.44049703844279,1.80845781402858,1.49680298132921,0.640568601424249,0.655912071918102,1.55222022443409,0.646703978798527,0.945530400839096,0.351902248327898,0.43839146485515,0,0.348252166522167,0.411564272815887,0,0,0,0,0.828503090142008,1.87620847984877,0.720248245844059,0.710234206755631,0.983821158737019,0.308534225774757,0.232533944750408,0.804820204198858,0.700592054203017,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,0,0.189491411770485,0.651859905768103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0.655739781506702,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0,0.534196811001766,0.488660878060728,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.484393280087717,0.301564624640779,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0.316011120628178,0,0.308132871494482,0.51968329191118,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0.183151624267265,0,0,0,0.920650473014354,0,0,0,0,0,0,0,0.51776031175182,0.518936737920883,0,0,0.243106717068294,0.628839487883947,0.367687016900028,1.11123363900808,0.412070114477788,0,0.758091635291392,0.25347929989024,0.565879024158229,0.468207537349412,0.384150914429216,0.459483751644906,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,0.588795680537589,0.342869252385415,0.70990322463735,0,0.436039249896986,0.282328141245992,0.169229215783353,0.73171189149109,0.263069711437843,0.407412341537585,0.561142271657738,0.830445126869219,0.29551344712669,0,0.77468420592983,0,0.999242311751784,0,0.214871054048298,0.765153328275374,0.220591419119515,0.231867835620421|short_description=p6@Epb4.1l3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13823 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WH44,uniprot:Q9WV92,uniprot:E9QN88,uniprot:Q8BGK4,uniprot:A7YY80 | |||
|association_with_transcript=-202bp_to_ENSMUST00000024843,ENSMUST00000080208,ENSMUST00000112678,ENSMUST00000112679,ENSMUST00000112680,NM_013813,uc008dko.1,uc008dkp.1,uc008dks.2_5end | |||
|cluster_id=chr17:69505940..69505947,+ | |||
|description=CAGE_peak_6_at_Epb4.1l3_5end | |||
|id=chr17:69505940..69505947,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.63e-09!102;UBERON:0000924!5.63e-09!102;UBERON:0006601!5.63e-09!102;UBERON:0002346!7.35e-09!71;UBERON:0003075!7.35e-09!71;UBERON:0007284!7.35e-09!71;UBERON:0000033!1.02e-07!63;UBERON:0000970!1.06e-07!9;UBERON:0000019!1.06e-07!9;UBERON:0000047!1.06e-07!9;UBERON:0004088!1.06e-07!9;UBERON:0002104!1.06e-07!9;UBERON:0001456!1.06e-07!9;UBERON:0003072!1.06e-07!9;UBERON:0003071!1.06e-07!9;UBERON:0004128!1.06e-07!9;UBERON:0000020!1.42e-07!12;UBERON:0001032!1.42e-07!12;UBERON:0004456!1.42e-07!12;UBERON:0000153!5.33e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,2.82e-22,9;UBERON:0000019,2.82e-22,9;UBERON:0000047,2.82e-22,9;UBERON:0010312,2.82e-22,9;UBERON:0004088,2.82e-22,9;UBERON:0002104,2.82e-22,9;UBERON:0001456,2.82e-22,9;UBERON:0003072,2.82e-22,9;UBERON:0004128,2.82e-22,9;UBERON:0003071,2.82e-22,9;UBERON:0001444,2.94e-18,11;UBERON:0000020,9.49e-17,12;UBERON:0001032,9.49e-17,12;UBERON:0004456,9.49e-17,12;UBERON:0000033,1.80e-15,13;UBERON:0005085,1.80e-15,13;UBERON:0007811,6.63e-08,36 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0.210324961351382,0.856952953211411,0,0.122490799214954,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.307213066512487,0.131886287730194,0.274462930807229,0,0.279182999001381,0.56276261003168,0.45839474333043,2.35702868378934,0.284743361598206,0.931997229126503,0,0.302286240427142,0,0,0,0,0,0,0,0,0,0,0.985903938436763,0,0,7.11066703153331,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.352766121407114,0,0.494389935468748,0.144599356919912,0,0.161766849947409,0,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0.255715457330331,0.62336413367868,0.811206315338788,0.101839363850316,0.124406970610093,0,0.420883711772948,0.780722657776222,1.14951052216736,1.44049703844279,1.80845781402858,1.49680298132921,0.640568601424249,0.655912071918102,1.55222022443409,0.646703978798527,0.945530400839096,0.351902248327898,0.43839146485515,0,0.348252166522167,0.411564272815887,0,0,0,0,0.828503090142008,1.87620847984877,0.720248245844059,0.710234206755631,0.983821158737019,0.308534225774757,0.232533944750408,0.804820204198858,0.700592054203017,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0.102904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0.744281895337007,0,0,0,0,0,0.189491411770485,0.651859905768103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.820481806145422,0.655739781506702,0,0.315508219416257,0.390438744296638,0.646270193198397,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0,0.534196811001766,0.488660878060728,0.164970122972535,0,0,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0.540183282093931,0.258717367565509,0.428674070063185,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0.21183207086382,0,0,0.484393280087717,0.301564624640779,0.119372344003136,0,0,0.741701208042039,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0,0,0.316011120628178,0,0.308132871494482,0.51968329191118,0,0,0.120195449519969,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0.183151624267265,0,0,0,0.920650473014354,0,0,0,0,0,0,0,0.51776031175182,0.518936737920883,0,0,0.243106717068294,0.628839487883947,0.367687016900028,1.11123363900808,0.412070114477788,0,0.758091635291392,0.25347929989024,0.565879024158229,0.468207537349412,0.384150914429216,0.459483751644906,0.476293691283074,0.811190281613988,0.578727661391115,0.824171801606613,0.588795680537589,0.342869252385415,0.70990322463735,0,0.436039249896986,0.282328141245992,0.169229215783353,0.73171189149109,0.263069711437843,0.407412341537585,0.561142271657738,0.830445126869219,0.29551344712669,0,0.77468420592983,0,0.999242311751784,0,0.214871054048298,0.765153328275374,0.220591419119515,0.231867835620421 | |||
|short_description=p6@Epb4.1l3 | |||
}} |
Revision as of 06:28, 5 August 2015
Short description: | p6@Epb4.1l3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Epb4.1l3_5end |
Coexpression cluster: | NA |
Association with transcript: | -202bp_to_ENSMUST00000024843, ENSMUST00000080208, ENSMUST00000112678, ENSMUST00000112679, ENSMUST00000112680, NM_013813, uc008dko.1, uc008dkp.1, uc008dks.2_5end |
EntrezGene: | 13823 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 2.82e-22 | 9 |
camera-type eye | 2.82e-22 | 9 |
simple eye | 2.82e-22 | 9 |
immature eye | 2.82e-22 | 9 |
ocular region | 2.82e-22 | 9 |
visual system | 2.82e-22 | 9 |
face | 2.82e-22 | 9 |
optic cup | 2.82e-22 | 9 |
optic vesicle | 2.82e-22 | 9 |
eye primordium | 2.82e-22 | 9 |
subdivision of head | 2.94e-18 | 11 |
sense organ | 9.49e-17 | 12 |
sensory system | 9.49e-17 | 12 |
entire sense organ system | 9.49e-17 | 12 |
head | 1.80e-15 | 13 |
ectodermal placode | 1.80e-15 | 13 |
craniocervical region | 6.63e-08 | 36 |