Personal tools

FFCP PHASE1:Mm9::chr4:154460357..154460374,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=67830|HGNC=|UniProt=B1AUE6,Q9CQU3|association_with_transcript=31bp_to_NM_026395,uc008wct.1,uc008wcu.1_5end|description=CAGE_peak_2_at_Rer1_5end|id=chr4:154460357..154460374,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.02e-09!15;UBERON:0001242!1.13e-07!13;UBERON:0000060!1.13e-07!13;UBERON:0001262!1.13e-07!13;UBERON:0004786!1.13e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.01e-09,15;UBERON:0001242,1.12e-07,13;UBERON:0001262,1.12e-07,13;UBERON:0004786,1.12e-07,13;UBERON:0000160,2.97e-07,31|phase1_expression=8.48788889655408,9.42233600626275,14.5599756604652,6.65421264875026,11.0197060588196,7.21880869221126,8.64366770203445,9.29687928779349,6.47628121897667,14.0438715793196,3.76679530096111,7.8974437405383,6.67682846731702,12.4136971434976,0.999329285446988,1.82227740650843,0,2.05050407482854,1.91960207048034,2.12194825899015,3.40173160604279,4.26951090163807,10.7091913546964,12.6394014006791,14.9116032693661,17.2269589234506,18.5227658348402,12.7128027284675,19.5724122040065,20.4144405105544,16.6297882991479,1.27006134691926,1.23012957516914,0,5.48818077527422,6.31691652362271,4.08338712524738,4.18531630736908,6.2506827561904,5.75876118371178,3.52938892818609,2.04913645487534,3.88408282424923,2.89562681343828,3.34543873024398,2.9367480345869,10.1710874765245,4.79655344036982,8.34807494390993,6.22175677037707,5.45947044338914,4.31257693094915,2.34895648480831,2.17608642603403,5.04140698713696,10.2903774414379,7.16333599846892,11.8604581223812,2.02316460859598,2.11596391708813,2.53532561402472,6.77689064138264,9.78224275722253,2.6996991518442,1.97773272513395,7.104801149461,3.89480143673926,1.92109152660777,1.65903379693564,2.02508907497536,2.52389953621658,3.42781181284564,3.3130281142742,1.5923803897944,2.20444583341944,1.83843757322004,0,1.78762273319263,1.99688493233117,1.18697658957174,3.01909223887952,0,1.95428099300967,2.8138130501584,1.5279824777681,0.589257170947335,3.13217697758026,2.42319279572891,3.93776205332557,4.08086424576642,4.92769630792852,2.58127163094416,4.75979933595425,7.01614149129162,3.24888208723835,3.13618820968135,6.31999890592883,6.30592193538814,5.19572009205738,6.36011234118612,7.74638808771743,1.28326477414318,2.54805239706646,0,2.38140145112336,3.29367825117628,3.53867111510348,6.16592950482924,3.36619248741323,1.03909497345377,3.81667718885499,3.34912026143355,2.30615497256059,3.76806601381556,2.4693628498498,2.13633205260448,3.95511948374998,1.44599356919912,0,3.88240439873782,2.20841518460394,3.87900202508178,1.86391761218122,0.585561594023094,1.04723353406728,4.08731288333746,11.981512450592,19.196887391789,10.1656181658452,0.748953197024114,3.66000482254901,1.38219787324151,2.43354048269187,1.53429274398198,0.62336413367868,2.59586020908412,2.95334155165917,1.99051152976149,6.82351447770922,10.1012090825508,2.60240885925407,2.5289231487682,1.98068342785884,3.16480117455002,1.7009124787832,1.15302348256365,1.78033276663485,4.39795730256327,2.80238390812695,3.02569728268511,2.81521798662318,3.28793598641362,4.17070873838397,2.78601733217733,5.76189981942242,3.38358253591438,13.3420505589515,8.4924809347856,6.53576048609863,4.55676699578104,4.45599513964083,3.96136535214233,4.7348947117042,4.32881309844288,2.93107514486019,2.55787339225449,2.68273401399619,2.80236821681207,1.31647879930784,2.46251196118643,2.10778904819225,2.04679982395465,2.63460138349261,1.20785776884335,0.841159794256509,2.16099685996497,8.26046957459495,11.9002754998595,1.70630600428187,3.71578674976702,1.80414445850931,4.03367049246685,2.89091456998331,3.42406127002606,5.69434873853414,5.43506550589236,5.7807098024062,5.76973768919337,3.11942539390592,4.49409704327111,5.83572734661674,5.77509692437665,3.22435431620239,3.31320686568214,3.38123207019241,1.83286195060783,3.87904974335251,2.59502533594179,4.48979413582227,4.28069429140846,3.92496819603437,5.05928372079382,3.55743152504579,1.33476084572875,1.37591296579242,1.34917267430912,1.42002084971952,2.41177159752417,2.03700681425136,2.5892652370573,1.45921704097532,3.29473695825698,0,5.58211421502755,4.99260276983297,3.28352541331245,3.76734568396016,4.3419916922703,2.95605104266567,4.9267767060326,3.42226450528254,3.22515662972857,3.28566347603903,4.35516269348721,2.14239276797412,4.48807390072937,2.36452716159286,2.43611158613652,2.55127629851979,3.27726629431476,3.9717545829156,2.4590339958857,7.53956419696361,4.89515115436839,13.769399644533,6.62248191131358,1.60550589987792,1.28932855251423,5.57378814280696,1.51482556322624,3.15508219416257,3.51394869866975,3.87762115919038,2.62865677747807,3.11918143715352,2.26461224631066,2.02405350837447,3.50707029493574,3.95287777946523,0.963963949265421,2.12910127812403,3.73937767701236,2.76907830901079,2.47455184458803,0,4.37005145078967,3.93020624054176,4.52652191414155,2.95301892880773,3.99665692327106,4.65170927702798,3.99887102425256,1.78248689192361,2.84433082142234,3.16255825724996,6.18813259489121,4.08527526904546,2.16073312837572,3.49268446213437,6.00143698088458,3.3694644392032,3.38900753443934,4.27827453565514,3.95804433848979,4.22409074514679,4.66030555900404,7.05690873775878,2.30840754118072,2.74489525383039,3.25689794612042,2.02932984805332,1.31312719796049,4.95517422270746,0.556275906031529,1.87957968877638,3.50857675537478,2.22233432843654,1.69531611304222,1.23024804948923,2.0590035588587,11.3885548095883,10.636310376598,10.2267980615274,5.72802370809068,2.84702394223022,4.47302827679067,1.51207477150522,3.3454127362315,4.58561383866973,4.5853877770839,4.1326727862668,4.4498510137285,5.96228877142247,3.72803587852155,1.12738587736838,2.24274819065968,2.81279433777066,2.33341426012857,3.61647505737647,2.19642963138012,3.52071715937262,2.73429208172295,1.78260885523708,2.41584120826006,2.88030006257865,5.05617793005085,3.64905387522296,4.5192821152524,5.1968329191118,5.54982756569192,5.16571522431289,4.44723163223885,3.98761723371358,4.94735604745923,4.11516755936999,5.64626636766307,4.97035191772737,2.98256709085021,3.15567635890236,1.36038230169127,3.99574716073316,3.22969883794113,5.03653849092235,2.12508553435409,3.00291960721891,2.01466786693992,1.50057865355346,12.5393026008841,2.82375921308533,0,1.14579102687879,1.54667864109319,0,0.755393897389701,1.35004500046361,1.35096360967266,1.35942722695261,1.03552062350364,0.93408612825759,4.78829848081237,3.07320490357441,2.43106717068294,2.09613162627982,1.83843508450014,1.55572709461131,1.23621034343337,2.88827288632634,3.03236654116557,2.78827229879264,1.50901073108861,2.34103768674706,2.94515701062399,2.5845961030026,2.85776214769844,2.66533949673168,3.6652751888104,2.47251540481984,3.23837624295674,2.40008476669791,2.30718548007139,2.62279808942053,2.32554266611726,1.88218760830661,2.03075058940024,3.84148743032822,4.20911538300549,3.12349461845482,3.92799590160417,3.32178050747688,2.85662998889134,1.22769312950907,2.47898945897546,4.43685205256625,2.24829520144151,2.57324769289949,3.65280791882107,2.29545998482612,3.97064554415128,5.10109238364927|short_description=p2@Rer1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:67830
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:B1AUE6,uniprot:Q9CQU3
|association_with_transcript=31bp_to_NM_026395,uc008wct.1,uc008wcu.1_5end
|cluster_id=chr4:154460357..154460374,-
|description=CAGE_peak_2_at_Rer1_5end
|id=chr4:154460357..154460374,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!6.02e-09!15;UBERON:0001242!1.13e-07!13;UBERON:0000060!1.13e-07!13;UBERON:0001262!1.13e-07!13;UBERON:0004786!1.13e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.01e-09,15;UBERON:0001242,1.12e-07,13;UBERON:0001262,1.12e-07,13;UBERON:0004786,1.12e-07,13;UBERON:0000160,2.97e-07,31
|phase1_expression=8.48788889655408,9.42233600626275,14.5599756604652,6.65421264875026,11.0197060588196,7.21880869221126,8.64366770203445,9.29687928779349,6.47628121897667,14.0438715793196,3.76679530096111,7.8974437405383,6.67682846731702,12.4136971434976,0.999329285446988,1.82227740650843,0,2.05050407482854,1.91960207048034,2.12194825899015,3.40173160604279,4.26951090163807,10.7091913546964,12.6394014006791,14.9116032693661,17.2269589234506,18.5227658348402,12.7128027284675,19.5724122040065,20.4144405105544,16.6297882991479,1.27006134691926,1.23012957516914,0,5.48818077527422,6.31691652362271,4.08338712524738,4.18531630736908,6.2506827561904,5.75876118371178,3.52938892818609,2.04913645487534,3.88408282424923,2.89562681343828,3.34543873024398,2.9367480345869,10.1710874765245,4.79655344036982,8.34807494390993,6.22175677037707,5.45947044338914,4.31257693094915,2.34895648480831,2.17608642603403,5.04140698713696,10.2903774414379,7.16333599846892,11.8604581223812,2.02316460859598,2.11596391708813,2.53532561402472,6.77689064138264,9.78224275722253,2.6996991518442,1.97773272513395,7.104801149461,3.89480143673926,1.92109152660777,1.65903379693564,2.02508907497536,2.52389953621658,3.42781181284564,3.3130281142742,1.5923803897944,2.20444583341944,1.83843757322004,0,1.78762273319263,1.99688493233117,1.18697658957174,3.01909223887952,0,1.95428099300967,2.8138130501584,1.5279824777681,0.589257170947335,3.13217697758026,2.42319279572891,3.93776205332557,4.08086424576642,4.92769630792852,2.58127163094416,4.75979933595425,7.01614149129162,3.24888208723835,3.13618820968135,6.31999890592883,6.30592193538814,5.19572009205738,6.36011234118612,7.74638808771743,1.28326477414318,2.54805239706646,0,2.38140145112336,3.29367825117628,3.53867111510348,6.16592950482924,3.36619248741323,1.03909497345377,3.81667718885499,3.34912026143355,2.30615497256059,3.76806601381556,2.4693628498498,2.13633205260448,3.95511948374998,1.44599356919912,0,3.88240439873782,2.20841518460394,3.87900202508178,1.86391761218122,0.585561594023094,1.04723353406728,4.08731288333746,11.981512450592,19.196887391789,10.1656181658452,0.748953197024114,3.66000482254901,1.38219787324151,2.43354048269187,1.53429274398198,0.62336413367868,2.59586020908412,2.95334155165917,1.99051152976149,6.82351447770922,10.1012090825508,2.60240885925407,2.5289231487682,1.98068342785884,3.16480117455002,1.7009124787832,1.15302348256365,1.78033276663485,4.39795730256327,2.80238390812695,3.02569728268511,2.81521798662318,3.28793598641362,4.17070873838397,2.78601733217733,5.76189981942242,3.38358253591438,13.3420505589515,8.4924809347856,6.53576048609863,4.55676699578104,4.45599513964083,3.96136535214233,4.7348947117042,4.32881309844288,2.93107514486019,2.55787339225449,2.68273401399619,2.80236821681207,1.31647879930784,2.46251196118643,2.10778904819225,2.04679982395465,2.63460138349261,1.20785776884335,0.841159794256509,2.16099685996497,8.26046957459495,11.9002754998595,1.70630600428187,3.71578674976702,1.80414445850931,4.03367049246685,2.89091456998331,3.42406127002606,5.69434873853414,5.43506550589236,5.7807098024062,5.76973768919337,3.11942539390592,4.49409704327111,5.83572734661674,5.77509692437665,3.22435431620239,3.31320686568214,3.38123207019241,1.83286195060783,3.87904974335251,2.59502533594179,4.48979413582227,4.28069429140846,3.92496819603437,5.05928372079382,3.55743152504579,1.33476084572875,1.37591296579242,1.34917267430912,1.42002084971952,2.41177159752417,2.03700681425136,2.5892652370573,1.45921704097532,3.29473695825698,0,5.58211421502755,4.99260276983297,3.28352541331245,3.76734568396016,4.3419916922703,2.95605104266567,4.9267767060326,3.42226450528254,3.22515662972857,3.28566347603903,4.35516269348721,2.14239276797412,4.48807390072937,2.36452716159286,2.43611158613652,2.55127629851979,3.27726629431476,3.9717545829156,2.4590339958857,7.53956419696361,4.89515115436839,13.769399644533,6.62248191131358,1.60550589987792,1.28932855251423,5.57378814280696,1.51482556322624,3.15508219416257,3.51394869866975,3.87762115919038,2.62865677747807,3.11918143715352,2.26461224631066,2.02405350837447,3.50707029493574,3.95287777946523,0.963963949265421,2.12910127812403,3.73937767701236,2.76907830901079,2.47455184458803,0,4.37005145078967,3.93020624054176,4.52652191414155,2.95301892880773,3.99665692327106,4.65170927702798,3.99887102425256,1.78248689192361,2.84433082142234,3.16255825724996,6.18813259489121,4.08527526904546,2.16073312837572,3.49268446213437,6.00143698088458,3.3694644392032,3.38900753443934,4.27827453565514,3.95804433848979,4.22409074514679,4.66030555900404,7.05690873775878,2.30840754118072,2.74489525383039,3.25689794612042,2.02932984805332,1.31312719796049,4.95517422270746,0.556275906031529,1.87957968877638,3.50857675537478,2.22233432843654,1.69531611304222,1.23024804948923,2.0590035588587,11.3885548095883,10.636310376598,10.2267980615274,5.72802370809068,2.84702394223022,4.47302827679067,1.51207477150522,3.3454127362315,4.58561383866973,4.5853877770839,4.1326727862668,4.4498510137285,5.96228877142247,3.72803587852155,1.12738587736838,2.24274819065968,2.81279433777066,2.33341426012857,3.61647505737647,2.19642963138012,3.52071715937262,2.73429208172295,1.78260885523708,2.41584120826006,2.88030006257865,5.05617793005085,3.64905387522296,4.5192821152524,5.1968329191118,5.54982756569192,5.16571522431289,4.44723163223885,3.98761723371358,4.94735604745923,4.11516755936999,5.64626636766307,4.97035191772737,2.98256709085021,3.15567635890236,1.36038230169127,3.99574716073316,3.22969883794113,5.03653849092235,2.12508553435409,3.00291960721891,2.01466786693992,1.50057865355346,12.5393026008841,2.82375921308533,0,1.14579102687879,1.54667864109319,0,0.755393897389701,1.35004500046361,1.35096360967266,1.35942722695261,1.03552062350364,0.93408612825759,4.78829848081237,3.07320490357441,2.43106717068294,2.09613162627982,1.83843508450014,1.55572709461131,1.23621034343337,2.88827288632634,3.03236654116557,2.78827229879264,1.50901073108861,2.34103768674706,2.94515701062399,2.5845961030026,2.85776214769844,2.66533949673168,3.6652751888104,2.47251540481984,3.23837624295674,2.40008476669791,2.30718548007139,2.62279808942053,2.32554266611726,1.88218760830661,2.03075058940024,3.84148743032822,4.20911538300549,3.12349461845482,3.92799590160417,3.32178050747688,2.85662998889134,1.22769312950907,2.47898945897546,4.43685205256625,2.24829520144151,2.57324769289949,3.65280791882107,2.29545998482612,3.97064554415128,5.10109238364927
|short_description=p2@Rer1
}}

Revision as of 06:57, 5 August 2015

Short description:p2@Rer1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rer1_5end
Coexpression cluster:NA
Association with transcript: 31bp_to_NM_026395, uc008wct.1, uc008wcu.1_5end
EntrezGene:67830
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rer1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.49
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I411.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.22
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.48
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.77
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.90
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E46.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.41
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.82
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A22.05
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.92
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.27
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.71
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D214.91
GP2+ M cell, pool1.CNhs13228.11845-124H917.23
GP2+ M cell, pool2.CNhs13231.11846-124I118.52
GP2+ M cell, pool3.CNhs13240.11847-124I212.71
Ileum epithelium, pool1.CNhs13199.10252-104B919.57
Ileum epithelium, pool2.CNhs13232.10253-104C120.41
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F66.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.08
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.90
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.35
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.22
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.46
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A22.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C110.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C511.86
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.03
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.20
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.02
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.42
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F94.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I76.31
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I86.36
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.75
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.29
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.17
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C53.82
adrenal gland, embryo E16.CNhs11004.1254-43D63.35
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F53.77
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I32.14
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C711.98
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D119.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D410.17
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G410.10
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D43.16
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H23.03
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A83.29
forelimb, embryo E15.CNhs11007.437-20E74.17
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B55.76
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C813.34
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.49
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.54
heart, embryo E11.CNhs10586.331-24E94.56
heart, embryo E12.CNhs11015.353-12F54.46
heart, embryo E13.CNhs11013.376-3I93.96
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C84.33
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G12.46
heart, neonate N16.CNhs11209.782-15G12.11
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I38.26
intestine, adult.CNhs10496.178-9A311.90
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D53.72
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H44.03
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D15.69
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B85.78
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G15.78
kidney, embryo E14.CNhs10606.411-4I93.22
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C73.88
kidney, neonate N00.CNhs11214.646-21G72.60
kidney, neonate N10.CNhs11206.758-6D54.49
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F33.92
kidney, neonate N30.CNhs11203.1385-42H15.06
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.35
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A33.28
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C53.23
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.36
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E52.36
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.55
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.57
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.51
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.02
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.51
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.13
ovary, embryo E18.CNhs11040.505-44H73.74
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D74.00
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C73.49
pituitary gland, embryo E14.CNhs11037.398-44A56.00
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F63.39
pituitary gland, embryo E17.CNhs11039.1265-44F54.28
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I74.22
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F87.06
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G42.74
skin, neonate N03.CNhs11215.662-22H33.26
skin, neonate N06.CNhs11097.693-20I52.03
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I14.96
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C13.51
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D310.23
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D41.51
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.59
stomach, neonate N07.CNhs11210.718-18A94.13
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I15.96
submandibular gland, adult.CNhs10469.59-29C13.73
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.81
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B73.52
testis, neonate N07.CNhs11222.726-26I42.73
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E22.88
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I43.65
thymus, embryo E15.CNhs11005.430-45I24.52
thymus, embryo E16.CNhs11002.456-26C55.20
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G45.17
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C73.99
thymus, neonate N06.CNhs11197.681-26C44.95
thymus, neonate N07.CNhs11211.713-19D34.12
thymus, neonate N10.CNhs11194.748-24E45.65
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G72.98
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.23
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F53.00
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.84
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.03
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.95
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.32
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D13.97
whole body, neonate N10.CNhs10518.761-6B45.10





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mucosa6.01e-0915
intestinal mucosa1.12e-0713
wall of intestine1.12e-0713
gastrointestinal system mucosa1.12e-0713
intestine2.97e-0731
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:154460357..154460374,-&oldid=3871436"