FFCP PHASE1:Mm9::chr2:71384802..71384815,-: Difference between revisions
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{{FFCP|EntrezGene=13392|HGNC=|MCL_coexpression_id=184|UniProt=P40764,Q52KJ2|association_with_transcript=0bp_to_ENSMUST00000024159,NM_010054,uc008kax.2_5end|description=CAGE_peak_1_at_Dlx2_5end|id=chr2:71384802..71384815,-|ontology_enrichment_celltype=CL:0000221!3.11e-09!44;CL:0000133!3.11e-09!44;CL:0002319!8.44e-09!43;CL:0000055!1.55e-07!50;CL:0000107!1.93e-07!9|ontology_enrichment_celltype_v019_2=CL:0000221,1.80e-11,44;CL:0000133,1.80e-11,44;CL:0002319,6.17e-11,43;CL:0000107,1.03e-08,9;CL:0000540,3.28e-08,33;CL:0000047,3.28e-08,33;CL:0000031,3.28e-08,33;CL:0000404,3.28e-08,33;CL:0000393,1.03e-07,39;CL:0000211,1.03e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.24e-16!102;UBERON:0000924!2.24e-16!102;UBERON:0006601!2.24e-16!102;UBERON:0003056!2.24e-13!49;UBERON:0000073!1.34e-12!75;UBERON:0001016!1.34e-12!75;UBERON:0000033!2.01e-12!63;UBERON:0001017!2.73e-12!73;UBERON:0005743!2.73e-12!73;UBERON:0002780!4.09e-11!39;UBERON:0001890!4.09e-11!39;UBERON:0006240!4.09e-11!39;UBERON:0003080!4.35e-11!40;UBERON:0002346!8.11e-11!71;UBERON:0003075!8.11e-11!71;UBERON:0007284!8.11e-11!71;UBERON:0002791!1.43e-10!29;UBERON:0003528!1.43e-10!29;UBERON:0001893!1.43e-10!29;UBERON:0000955!7.07e-10!50;UBERON:0006238!7.07e-10!50;UBERON:0002616!2.61e-09!49;UBERON:0000153!1.16e-08!94;UBERON:0000956!3.47e-08!21;UBERON:0001869!3.47e-08!21;UBERON:0000203!3.47e-08!21;UBERON:0002020!1.46e-07!34;UBERON:0002410!1.93e-07!9;UBERON:0000010!2.70e-07!11;UBERON:0007811!3.38e-07!86;UBERON:0001049!4.51e-07!52;UBERON:0005068!4.51e-07!52;UBERON:0006241!4.51e-07!52;UBERON:0007135!4.51e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.10e-18,95;UBERON:0000924,1.10e-18,95;UBERON:0006601,1.10e-18,95;UBERON:0001016,1.64e-14,75;UBERON:0001017,3.89e-14,73;UBERON:0010371,6.83e-14,73;UBERON:0003056,1.32e-13,49;UBERON:0003528,9.47e-13,29;UBERON:0002791,9.47e-13,29;UBERON:0001893,9.47e-13,29;UBERON:0002780,3.22e-12,39;UBERON:0001890,3.22e-12,39;UBERON:0006240,3.22e-12,39;UBERON:0003080,1.29e-11,40;UBERON:0002346,1.72e-11,64;UBERON:0003075,1.72e-11,64;UBERON:0007284,1.72e-11,64;UBERON:0000955,4.50e-11,47;UBERON:0006238,4.50e-11,47;UBERON:0002616,2.18e-10,46;UBERON:0000956,1.28e-09,21;UBERON:0001869,1.28e-09,21;UBERON:0000203,1.28e-09,21;UBERON:0002020,2.02e-09,34;UBERON:0002410,1.03e-08,9;UBERON:0000010,1.54e-08,11;UBERON:0000073,4.14e-08,54;UBERON:0001049,7.30e-08,52;UBERON:0005068,7.30e-08,52;UBERON:0006241,7.30e-08,52;UBERON:0007135,7.30e-08,52;UBERON:0002619,3.30e-07,17|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03587271902309,4.56196190487815,5.68994931701213,3.9119567217402,41.8608300250457,2.19686182734472,1.1665793944457,3.07970127575798,4.31257693094915,0,0,0,0,0,0,0,0,0.633831403506179,1.69422266034566,0,0.449949858640699,0,0.7104801149461,5.69240209984969,14.9845139075406,24.9891965663431,33.3464667679276,26.0802952075714,0,0.220868540951614,283.321218584189,291.657768308493,288.634698995547,0,2.29837208553338,1.22885226604995,47.0834047196792,26.805879575506,41.6730696445408,0,1.68828783009504,3.97275444219706,0,0,0,3.63485727999283,1.51143120213571,0,0,0,0,0,0,0.983110940922263,2.21559419351475,1.55871602761721,0.70667914902068,9.71819596459095,0,2.54805239706646,7.11066703153331,0,0,0,0.11418387971906,0,0.29688427812965,5.03107447621794,0.608930956624282,1.38369298353635,0.753613202763113,0.352766121407114,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0.748953197024114,10.980014467647,90.5967878733752,5.21472960576829,3.3243009452943,3.74018480207208,6.48965052271031,0.203678727700633,0.124406970610093,0,0.210441855886474,16.6554166992261,22.0706020256134,23.4080768746954,8.74087943447147,4.83059143974428,3.97152532883034,2.43624483855295,0.258703370739016,12.9340795759705,7.56424320671277,7.03804496655795,5.69908904311695,4.44875598760957,3.48252166522167,2.88094990971121,0,0,0,0,0.621377317606506,0.938104239924385,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,5.46753866266731,30.4597652642682,0,0,7.67837701926842,8.59275685883622,4.63922860759536,2.8235693447268,1.11189021922435,3.42406127002606,0,0.494096864172033,0.754005626400808,0.795825888164603,0.779856348476481,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0,0,0.140271639780637,0,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.89491411770485,0.488894929326078,0,0.469380496577004,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,12.622990794004,0,31.8663301610419,33.1872932652143,10.9865932843727,49.9444787720834,38.7669692903366,30.2891887944051,67.1985764780325,45.2996579762533,56.1308644684063,55.5885877409726,0.141940085208269,0.534196811001766,0.488660878060728,0,0,1.94224508923985,0.302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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13392 | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P40764,uniprot:Q52KJ2 | |||
|association_with_transcript=0bp_to_ENSMUST00000024159,NM_010054,uc008kax.2_5end | |||
|cluster_id=chr2:71384802..71384815,- | |||
|description=CAGE_peak_1_at_Dlx2_5end | |||
|id=chr2:71384802..71384815,- | |||
|ontology_enrichment_celltype=CL:0000221!3.11e-09!44;CL:0000133!3.11e-09!44;CL:0002319!8.44e-09!43;CL:0000055!1.55e-07!50;CL:0000107!1.93e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.80e-11,44;CL:0000133,1.80e-11,44;CL:0002319,6.17e-11,43;CL:0000107,1.03e-08,9;CL:0000540,3.28e-08,33;CL:0000047,3.28e-08,33;CL:0000031,3.28e-08,33;CL:0000404,3.28e-08,33;CL:0000393,1.03e-07,39;CL:0000211,1.03e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.24e-16!102;UBERON:0000924!2.24e-16!102;UBERON:0006601!2.24e-16!102;UBERON:0003056!2.24e-13!49;UBERON:0000073!1.34e-12!75;UBERON:0001016!1.34e-12!75;UBERON:0000033!2.01e-12!63;UBERON:0001017!2.73e-12!73;UBERON:0005743!2.73e-12!73;UBERON:0002780!4.09e-11!39;UBERON:0001890!4.09e-11!39;UBERON:0006240!4.09e-11!39;UBERON:0003080!4.35e-11!40;UBERON:0002346!8.11e-11!71;UBERON:0003075!8.11e-11!71;UBERON:0007284!8.11e-11!71;UBERON:0002791!1.43e-10!29;UBERON:0003528!1.43e-10!29;UBERON:0001893!1.43e-10!29;UBERON:0000955!7.07e-10!50;UBERON:0006238!7.07e-10!50;UBERON:0002616!2.61e-09!49;UBERON:0000153!1.16e-08!94;UBERON:0000956!3.47e-08!21;UBERON:0001869!3.47e-08!21;UBERON:0000203!3.47e-08!21;UBERON:0002020!1.46e-07!34;UBERON:0002410!1.93e-07!9;UBERON:0000010!2.70e-07!11;UBERON:0007811!3.38e-07!86;UBERON:0001049!4.51e-07!52;UBERON:0005068!4.51e-07!52;UBERON:0006241!4.51e-07!52;UBERON:0007135!4.51e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.10e-18,95;UBERON:0000924,1.10e-18,95;UBERON:0006601,1.10e-18,95;UBERON:0001016,1.64e-14,75;UBERON:0001017,3.89e-14,73;UBERON:0010371,6.83e-14,73;UBERON:0003056,1.32e-13,49;UBERON:0003528,9.47e-13,29;UBERON:0002791,9.47e-13,29;UBERON:0001893,9.47e-13,29;UBERON:0002780,3.22e-12,39;UBERON:0001890,3.22e-12,39;UBERON:0006240,3.22e-12,39;UBERON:0003080,1.29e-11,40;UBERON:0002346,1.72e-11,64;UBERON:0003075,1.72e-11,64;UBERON:0007284,1.72e-11,64;UBERON:0000955,4.50e-11,47;UBERON:0006238,4.50e-11,47;UBERON:0002616,2.18e-10,46;UBERON:0000956,1.28e-09,21;UBERON:0001869,1.28e-09,21;UBERON:0000203,1.28e-09,21;UBERON:0002020,2.02e-09,34;UBERON:0002410,1.03e-08,9;UBERON:0000010,1.54e-08,11;UBERON:0000073,4.14e-08,54;UBERON:0001049,7.30e-08,52;UBERON:0005068,7.30e-08,52;UBERON:0006241,7.30e-08,52;UBERON:0007135,7.30e-08,52;UBERON:0002619,3.30e-07,17 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03587271902309,4.56196190487815,5.68994931701213,3.9119567217402,41.8608300250457,2.19686182734472,1.1665793944457,3.07970127575798,4.31257693094915,0,0,0,0,0,0,0,0,0.633831403506179,1.69422266034566,0,0.449949858640699,0,0.7104801149461,5.69240209984969,14.9845139075406,24.9891965663431,33.3464667679276,26.0802952075714,0,0.220868540951614,283.321218584189,291.657768308493,288.634698995547,0,2.29837208553338,1.22885226604995,47.0834047196792,26.805879575506,41.6730696445408,0,1.68828783009504,3.97275444219706,0,0,0,3.63485727999283,1.51143120213571,0,0,0,0,0,0,0.983110940922263,2.21559419351475,1.55871602761721,0.70667914902068,9.71819596459095,0,2.54805239706646,7.11066703153331,0,0,0,0.11418387971906,0,0.29688427812965,5.03107447621794,0.608930956624282,1.38369298353635,0.753613202763113,0.352766121407114,0.251333182659351,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0.748953197024114,10.980014467647,90.5967878733752,5.21472960576829,3.3243009452943,3.74018480207208,6.48965052271031,0.203678727700633,0.124406970610093,0,0.210441855886474,16.6554166992261,22.0706020256134,23.4080768746954,8.74087943447147,4.83059143974428,3.97152532883034,2.43624483855295,0.258703370739016,12.9340795759705,7.56424320671277,7.03804496655795,5.69908904311695,4.44875598760957,3.48252166522167,2.88094990971121,0,0,0,0,0.621377317606506,0.938104239924385,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0.164167464079095,0,0,0,0,5.46753866266731,30.4597652642682,0,0,7.67837701926842,8.59275685883622,4.63922860759536,2.8235693447268,1.11189021922435,3.42406127002606,0,0.494096864172033,0.754005626400808,0.795825888164603,0.779856348476481,0,0.216138049874694,0.398282546508734,0,0.228497025219458,0,0,0,0.140271639780637,0,0,0,0,0,0.333690211432188,0.393117990226406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,1.89491411770485,0.488894929326078,0,0.469380496577004,0.335012514883631,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0.117211686592203,12.622990794004,0,31.8663301610419,33.1872932652143,10.9865932843727,49.9444787720834,38.7669692903366,30.2891887944051,67.1985764780325,45.2996579762533,56.1308644684063,55.5885877409726,0.141940085208269,0.534196811001766,0.488660878060728,0,0,1.94224508923985,0.302323556964751,0,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0,0,0,0,17.6459872150684,10.4780533864031,5.35842587578981,0.532020700926821,0.356737635204141,0.164549020602121,1.2178597964584,0,0,0.441056796109924,10.8824926941377,3.55221738730992,14.8369795323263,23.8744688006273,32.9923208487573,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,12.0207677560831,7.72613975082025,3.99619761040665,4.39085421630384,2.40198820120795,1.48350781023303,0.991841468704031,0,0.388844919875379,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.117357238645754,0,0.314578033277133,0.241584120826006,0,0,1.62180172232131,1.02710957164827,0.51968329191118,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0.0974578807397524,0,0,4.0811469050738,0.665957860122194,0,0.335769232728157,0,0,0,3.00115730710692,0,5.64751842617067,5.06357760157895,5.15605962095457,3.26521046453006,4.7955776383945,1.5107877947794,2.70009000092722,5.85417564191487,4.53142408984205,4.65984280576638,19.5120213458252,26.7346665178691,16.561159758151,12.398442570483,13.4152424081909,8.64064489715066,8.44537565646138,6.79915688888351,8.3438994493872,6.57012750585873,5.83002389747551,7.35642731405697,5.71213195566283,6.97874161213075,6.71994986780675,5.71552429539688,6.02598494913249,7.33055037762079,7.82963211526283,5.7407578852415,6.17164654293748,5.50174999093946,5.96090474868302,6.39524233182245,5.36423468367385,4.23073039458383,5.3049112133104,4.99832451731901,5.56796866768033,4.48913817326191,6.4062909787054,5.41774653065599,5.72923460437565,4.80304207676495,6.94463799532109,20.9840885467875,4.44470056046276,7.73535794573874,0.956441660344217,1.32354851471709,0.463735671240843 | |||
|short_description=p1@Dlx2 | |||
}} |
Revision as of 10:14, 5 August 2015
Short description: | p1@Dlx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dlx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | 0bp_to_ENSMUST00000024159, NM_010054, uc008kax.2_5end |
EntrezGene: | 13392 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.80e-11 | 44 |
neurectodermal cell | 1.80e-11 | 44 |
neural cell | 6.17e-11 | 43 |
autonomic neuron | 1.03e-08 | 9 |
neuron | 3.28e-08 | 33 |
neuronal stem cell | 3.28e-08 | 33 |
neuroblast | 3.28e-08 | 33 |
electrically signaling cell | 3.28e-08 | 33 |
electrically responsive cell | 1.03e-07 | 39 |
electrically active cell | 1.03e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.10e-18 | 95 |
ectoderm | 1.10e-18 | 95 |
presumptive ectoderm | 1.10e-18 | 95 |
nervous system | 1.64e-14 | 75 |
central nervous system | 3.89e-14 | 73 |
ecto-epithelium | 6.83e-14 | 73 |
pre-chordal neural plate | 1.32e-13 | 49 |
brain grey matter | 9.47e-13 | 29 |
regional part of telencephalon | 9.47e-13 | 29 |
telencephalon | 9.47e-13 | 29 |
regional part of forebrain | 3.22e-12 | 39 |
forebrain | 3.22e-12 | 39 |
future forebrain | 3.22e-12 | 39 |
anterior neural tube | 1.29e-11 | 40 |
neurectoderm | 1.72e-11 | 64 |
neural plate | 1.72e-11 | 64 |
presumptive neural plate | 1.72e-11 | 64 |
brain | 4.50e-11 | 47 |
future brain | 4.50e-11 | 47 |
regional part of brain | 2.18e-10 | 46 |
cerebral cortex | 1.28e-09 | 21 |
cerebral hemisphere | 1.28e-09 | 21 |
pallium | 1.28e-09 | 21 |
gray matter | 2.02e-09 | 34 |
autonomic nervous system | 1.03e-08 | 9 |
peripheral nervous system | 1.54e-08 | 11 |
regional part of nervous system | 4.14e-08 | 54 |
neural tube | 7.30e-08 | 52 |
neural rod | 7.30e-08 | 52 |
future spinal cord | 7.30e-08 | 52 |
neural keel | 7.30e-08 | 52 |
regional part of cerebral cortex | 3.30e-07 | 17 |