FFCP PHASE1:Mm9::chr2:79096094..79096109,+: Difference between revisions
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{{FFCP|EntrezGene=16401|HGNC=|MCL_coexpression_id=122|UniProt=|association_with_transcript=0bp_to_ENSMUST00000126312_5end|description=CAGE_peak_5_at_Itga4_5end|id=chr2:79096094..79096109,+|ontology_enrichment_celltype=CL:0000838!5.35e-09!12;CL:0002031!1.27e-08!25;CL:0000084!2.36e-08!11;CL:0000827!2.36e-08!11;CL:0000988!4.83e-08!32;CL:0002032!4.83e-08!32;CL:0000037!4.83e-08!32;CL:0000566!4.83e-08!32;CL:0000837!4.83e-08!32;CL:0000542!1.19e-07!13;CL:0000051!1.19e-07!13;CL:0000791!4.00e-07!9;CL:0000789!4.00e-07!9;CL:0002420!4.00e-07!9;CL:0002419!4.00e-07!9;CL:0000790!4.00e-07!9|ontology_enrichment_celltype_v019_2=CL:0000838,3.26e-13,12;CL:0002031,1.72e-12,25;CL:0000084,3.32e-12,11;CL:0000827,3.32e-12,11;CL:0000542,7.51e-12,13;CL:0000051,7.51e-12,13;CL:0000988,2.49e-11,32;CL:0002032,2.49e-11,32;CL:0000037,2.49e-11,32;CL:0000837,2.49e-11,32;CL:0000791,2.76e-10,9;CL:0000789,2.76e-10,9;CL:0002420,2.76e-10,9;CL:0002419,2.76e-10,9;CL:0000790,2.76e-10,9;CL:0000624,3.26e-09,8;CL:0000738,4.66e-08,17;CL:0002087,4.66e-08,17;CL:0000893,5.28e-07,6;CL:0002489,5.28e-07,6;CL:0000898,5.28e-07,6;CL:0000809,5.28e-07,6;CL:0000810,5.28e-07,6;CL:0000895,5.28e-07,6;CL:0000808,5.28e-07,6;CL:0000894,5.28e-07,6;CL:0000806,5.28e-07,6;CL:0000807,5.28e-07,6;CL:0000805,5.28e-07,6;CL:0002425,5.28e-07,6;CL:0002436,5.28e-07,6;CL:0002427,5.28e-07,6;CL:0002428,5.28e-07,6;CL:0002429,5.28e-07,6;CL:0002433,5.28e-07,6;CL:0002431,5.28e-07,6;CL:0002432,5.28e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.23e-12!48;UBERON:0004177!1.88e-11!29;UBERON:0002390!3.13e-11!45;UBERON:0003061!3.13e-11!45;UBERON:0002370!5.14e-09!23;UBERON:0000974!5.14e-09!23;UBERON:0004807!5.14e-09!23;UBERON:0005058!5.14e-09!23;UBERON:0003351!5.14e-09!23;UBERON:0009113!5.14e-09!23;UBERON:0003295!5.14e-09!23;UBERON:0009722!5.14e-09!23;UBERON:0005562!5.14e-09!23;UBERON:0007690!5.14e-09!23;UBERON:0002405!1.28e-08!70;UBERON:0006562!4.08e-08!24;UBERON:0003408!4.08e-08!24;UBERON:0001557!4.08e-08!24;UBERON:0001042!4.08e-08!24;UBERON:0008814!4.08e-08!24;UBERON:0009145!4.08e-08!24;UBERON:0000065!1.07e-07!41;UBERON:0003081!3.70e-07!88;UBERON:0001004!3.96e-07!42;UBERON:0005057!5.23e-07!51|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.70e-18,29;UBERON:0005057,1.70e-18,29;UBERON:0002390,3.80e-16,45;UBERON:0003061,3.80e-16,45;UBERON:0002193,6.67e-16,48;UBERON:0002405,6.67e-16,48;UBERON:0002370,3.81e-15,23;UBERON:0000974,3.81e-15,23;UBERON:0004807,3.81e-15,23;UBERON:0005058,3.81e-15,23;UBERON:0003351,3.81e-15,23;UBERON:0009113,3.81e-15,23;UBERON:0003295,3.81e-15,23;UBERON:0009722,3.81e-15,23;UBERON:0005562,3.81e-15,23;UBERON:0007690,3.81e-15,23;UBERON:0000077,9.16e-15,35;UBERON:0006562,3.32e-14,24;UBERON:0003408,3.32e-14,24;UBERON:0001557,3.32e-14,24;UBERON:0001042,3.32e-14,24;UBERON:0008814,3.32e-14,24;UBERON:0009145,3.32e-14,24;UBERON:0000065,4.94e-12,41;UBERON:0000072,8.04e-12,27;UBERON:0001004,1.58e-11,42;UBERON:0001041,7.10e-10,80;UBERON:0005911,9.50e-09,69;UBERON:0003081,1.59e-07,87;UBERON:0003929,1.92e-07,55;UBERON:0007811,3.38e-07,36|phase1_expression=0.160148847104794,0,0,0,0,0,0,23.3713215429253,5.34997144176334,3.7450324211519,3.08192342805909,2.15384829287408,16.4352700733957,9.35398305883272,3.66420737997229,4.04950534779652,0.699561878128147,7.5710919685977,8.5010948835558,8.06340338416257,0.17008658030214,5.16312946244604,4.96279599363977,0.95995453676044,0.45881856213434,0,0,0,0,0.252030129759931,0,1.27006134691926,1.23012957516914,0,0,0,0,0,0.7813353445238,0,0,3.41522742479223,1.45653105909346,0,0,0,0,0,0,0,0.139986421625363,0,6.20795642413625,12.3311564141929,8.73843877770406,0,0,0.515672092277442,0,0,0,0,0,1.7997994345628,0,0.7104801149461,0,0.384218305321555,0.207379224616955,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.274462930807229,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,13.2058320660058,0.29688427812965,0.173485326766136,0.304465478312141,0.691846491768175,0,0.352766121407114,0,0.741584903203122,1.3013942122792,3.5384422077995,0.485300549842228,1.10420759230197,2.42437626567611,0,0,0.41889341362691,1.27728527604296,1.55759661857696,1.79970819298022,1.52484272487678,0.149790639404823,0.915001205637253,0,0.347648640384553,0,0.62336413367868,0,1.32391173005411,1.8661045591514,0.505445516867349,0,0,0,0,0.452114453507145,0.340182495756639,0.384341160854549,0.187403449119458,0.258703370739016,0.646703978798527,0,0.351902248327898,1.31517439456545,0.278047249225598,0.696504333044333,0.61734640922383,0,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.493679549740441,0.492502392237286,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0.660837565967596,0.528901133327089,0,0.696710015581316,0.38660238396628,0.201683524623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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16401 | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000126312_5end | |||
|cluster_id=chr2:79096094..79096109,+ | |||
|description=CAGE_peak_5_at_Itga4_5end | |||
|id=chr2:79096094..79096109,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.35e-09!12;CL:0002031!1.27e-08!25;CL:0000084!2.36e-08!11;CL:0000827!2.36e-08!11;CL:0000988!4.83e-08!32;CL:0002032!4.83e-08!32;CL:0000037!4.83e-08!32;CL:0000566!4.83e-08!32;CL:0000837!4.83e-08!32;CL:0000542!1.19e-07!13;CL:0000051!1.19e-07!13;CL:0000791!4.00e-07!9;CL:0000789!4.00e-07!9;CL:0002420!4.00e-07!9;CL:0002419!4.00e-07!9;CL:0000790!4.00e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.26e-13,12;CL:0002031,1.72e-12,25;CL:0000084,3.32e-12,11;CL:0000827,3.32e-12,11;CL:0000542,7.51e-12,13;CL:0000051,7.51e-12,13;CL:0000988,2.49e-11,32;CL:0002032,2.49e-11,32;CL:0000037,2.49e-11,32;CL:0000837,2.49e-11,32;CL:0000791,2.76e-10,9;CL:0000789,2.76e-10,9;CL:0002420,2.76e-10,9;CL:0002419,2.76e-10,9;CL:0000790,2.76e-10,9;CL:0000624,3.26e-09,8;CL:0000738,4.66e-08,17;CL:0002087,4.66e-08,17;CL:0000893,5.28e-07,6;CL:0002489,5.28e-07,6;CL:0000898,5.28e-07,6;CL:0000809,5.28e-07,6;CL:0000810,5.28e-07,6;CL:0000895,5.28e-07,6;CL:0000808,5.28e-07,6;CL:0000894,5.28e-07,6;CL:0000806,5.28e-07,6;CL:0000807,5.28e-07,6;CL:0000805,5.28e-07,6;CL:0002425,5.28e-07,6;CL:0002436,5.28e-07,6;CL:0002427,5.28e-07,6;CL:0002428,5.28e-07,6;CL:0002429,5.28e-07,6;CL:0002433,5.28e-07,6;CL:0002431,5.28e-07,6;CL:0002432,5.28e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.23e-12!48;UBERON:0004177!1.88e-11!29;UBERON:0002390!3.13e-11!45;UBERON:0003061!3.13e-11!45;UBERON:0002370!5.14e-09!23;UBERON:0000974!5.14e-09!23;UBERON:0004807!5.14e-09!23;UBERON:0005058!5.14e-09!23;UBERON:0003351!5.14e-09!23;UBERON:0009113!5.14e-09!23;UBERON:0003295!5.14e-09!23;UBERON:0009722!5.14e-09!23;UBERON:0005562!5.14e-09!23;UBERON:0007690!5.14e-09!23;UBERON:0002405!1.28e-08!70;UBERON:0006562!4.08e-08!24;UBERON:0003408!4.08e-08!24;UBERON:0001557!4.08e-08!24;UBERON:0001042!4.08e-08!24;UBERON:0008814!4.08e-08!24;UBERON:0009145!4.08e-08!24;UBERON:0000065!1.07e-07!41;UBERON:0003081!3.70e-07!88;UBERON:0001004!3.96e-07!42;UBERON:0005057!5.23e-07!51 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.70e-18,29;UBERON:0005057,1.70e-18,29;UBERON:0002390,3.80e-16,45;UBERON:0003061,3.80e-16,45;UBERON:0002193,6.67e-16,48;UBERON:0002405,6.67e-16,48;UBERON:0002370,3.81e-15,23;UBERON:0000974,3.81e-15,23;UBERON:0004807,3.81e-15,23;UBERON:0005058,3.81e-15,23;UBERON:0003351,3.81e-15,23;UBERON:0009113,3.81e-15,23;UBERON:0003295,3.81e-15,23;UBERON:0009722,3.81e-15,23;UBERON:0005562,3.81e-15,23;UBERON:0007690,3.81e-15,23;UBERON:0000077,9.16e-15,35;UBERON:0006562,3.32e-14,24;UBERON:0003408,3.32e-14,24;UBERON:0001557,3.32e-14,24;UBERON:0001042,3.32e-14,24;UBERON:0008814,3.32e-14,24;UBERON:0009145,3.32e-14,24;UBERON:0000065,4.94e-12,41;UBERON:0000072,8.04e-12,27;UBERON:0001004,1.58e-11,42;UBERON:0001041,7.10e-10,80;UBERON:0005911,9.50e-09,69;UBERON:0003081,1.59e-07,87;UBERON:0003929,1.92e-07,55;UBERON:0007811,3.38e-07,36 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,23.3713215429253,5.34997144176334,3.7450324211519,3.08192342805909,2.15384829287408,16.4352700733957,9.35398305883272,3.66420737997229,4.04950534779652,0.699561878128147,7.5710919685977,8.5010948835558,8.06340338416257,0.17008658030214,5.16312946244604,4.96279599363977,0.95995453676044,0.45881856213434,0,0,0,0,0.252030129759931,0,1.27006134691926,1.23012957516914,0,0,0,0,0,0.7813353445238,0,0,3.41522742479223,1.45653105909346,0,0,0,0,0,0,0,0.139986421625363,0,6.20795642413625,12.3311564141929,8.73843877770406,0,0,0.515672092277442,0,0,0,0,0,1.7997994345628,0,0.7104801149461,0,0.384218305321555,0.207379224616955,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.274462930807229,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,13.2058320660058,0.29688427812965,0.173485326766136,0.304465478312141,0.691846491768175,0,0.352766121407114,0,0.741584903203122,1.3013942122792,3.5384422077995,0.485300549842228,1.10420759230197,2.42437626567611,0,0,0.41889341362691,1.27728527604296,1.55759661857696,1.79970819298022,1.52484272487678,0.149790639404823,0.915001205637253,0,0.347648640384553,0,0.62336413367868,0,1.32391173005411,1.8661045591514,0.505445516867349,0,0,0,0,0.452114453507145,0.340182495756639,0.384341160854549,0.187403449119458,0.258703370739016,0.646703978798527,0,0.351902248327898,1.31517439456545,0.278047249225598,0.696504333044333,0.61734640922383,0,0.702213187313235,0.51469581422943,0,0,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.493679549740441,0.492502392237286,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0.102904612379284,0.660837565967596,0.528901133327089,0,0.696710015581316,0.38660238396628,0.201683524623343,0.22237804384487,0.190225626112559,0,0.494096864172033,0,0.397912944082302,1.16978452271472,0,1.08069024937347,0.398282546508734,0.189667900953082,0.571242563048644,0,0.407302655690628,0.775809948670503,0.420814919341911,1.3279672796094,0.885660887877613,1.255989822731,0.493588655687202,0,1.66845105716094,1.76903095601883,2.69834534861824,2.63718157805054,2.41177159752417,2.03700681425136,2.01387296215567,2.10775794807546,0.549122826376163,0,0.372140947668503,0.312037673114561,0,0.179397413521912,0,2.03228509183265,0.568474235311454,0.325929952884052,0.509235257325564,0.234690248288502,0.837531287209079,0,1.17080188714679,2.36452716159286,2.87904096543407,3.18909537314974,2.94953966488328,2.24490476425664,0.578596234326046,0,0.54390568381871,0,0.551873492609465,0.160550589987792,0.117211686592203,0,0.252470927204373,0.631016438832513,1.56175497718655,0.861693590931196,2.15071918157297,1.78238939265915,1.98153571552183,1.21443210502468,1.75353514746787,1.97643888973262,0,0.709700426041343,0.35613120733451,0.325773918707152,0,0,0,0.906970670894253,0,0,0,0,0.363533729477506,1.06949213515416,0.948110273807448,0,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.532020700926821,0.356737635204141,0,0,1.17335854031855,0.42366414172764,0,0.49465875882444,0.484393280087717,0.301564624640779,0.596861720015682,0.164140899745061,0.874442509889552,0.370850604021019,8.71441492069049,0.412773735926445,1.29636169158798,4.89757988212197,4.78429797023588,5.49067615695654,2.03974115992626,2.51912614182584,2.3493995546752,0,0,0.203319467126849,0.216010681643603,0.418176592028937,0.436725127492355,0.269728692769641,0.743881101528023,0.26175594198403,0.259229946583586,0,0,1.79419855252775,1.32366792365678,1.55560950675238,1.6790777052105,1.18269287843545,1.99507305697782,0.651021924219751,0.419437377702843,0,0,6.95224465381992,1.21635129174099,3.3894615864393,4.28738715826724,3.93858730468459,3.9736270956253,2.88469078847925,2.95379054349154,2.62512769865184,2.97206545954499,3.2264379243789,2.82627854145282,5.00301576529713,7.71387554398355,0,0,0,0,0.386379188064381,1.31377732815827,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.170733605754134,0.972426868273176,1.04806581313991,0.551530525350042,0.222246727801615,1.03017528619447,1.28367683836726,0.758091635291392,1.2673964994512,0.565879024158229,1.03005658216871,0.832326981263301,0.631790158511746,1.42888107384922,0.231768651889711,1.15745532278223,1.64834360321323,0.735994600671987,2.05721551431249,0.70990322463735,0.476872379894642,0.436039249896986,1.03520318456864,0.592302255241736,1.09756783723664,1.05227884575137,1.22223702461276,0,1.06771516311757,0.788035859004508,0.818462086339379,0.929621047115796,0.771626443924566,0.499621155875892,0.701794825336225,0.644613162144895,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p5@Itga4 | |||
}} |
Revision as of 13:05, 5 August 2015
Short description: | p5@Itga4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Itga4_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 0bp_to_ENSMUST00000126312_5end |
EntrezGene: | 16401 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.70e-18 | 29 |
immune organ | 1.70e-18 | 29 |
hematopoietic system | 3.80e-16 | 45 |
blood island | 3.80e-16 | 45 |
hemolymphoid system | 6.67e-16 | 48 |
immune system | 6.67e-16 | 48 |
thymus | 3.81e-15 | 23 |
neck | 3.81e-15 | 23 |
respiratory system epithelium | 3.81e-15 | 23 |
hemolymphoid system gland | 3.81e-15 | 23 |
pharyngeal epithelium | 3.81e-15 | 23 |
thymic region | 3.81e-15 | 23 |
pharyngeal gland | 3.81e-15 | 23 |
entire pharyngeal arch endoderm | 3.81e-15 | 23 |
thymus primordium | 3.81e-15 | 23 |
early pharyngeal endoderm | 3.81e-15 | 23 |
mixed endoderm/mesoderm-derived structure | 9.16e-15 | 35 |
pharynx | 3.32e-14 | 24 |
gland of gut | 3.32e-14 | 24 |
upper respiratory tract | 3.32e-14 | 24 |
chordate pharynx | 3.32e-14 | 24 |
pharyngeal arch system | 3.32e-14 | 24 |
pharyngeal region of foregut | 3.32e-14 | 24 |
respiratory tract | 4.94e-12 | 41 |
segment of respiratory tract | 8.04e-12 | 27 |
respiratory system | 1.58e-11 | 42 |
foregut | 7.10e-10 | 80 |
endo-epithelium | 9.50e-09 | 69 |
lateral plate mesoderm | 1.59e-07 | 87 |
gut epithelium | 1.92e-07 | 55 |
craniocervical region | 3.38e-07 | 36 |