FFCP PHASE1:Mm9::chr1:40738416..40738451,+: Difference between revisions
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{{FFCP|EntrezGene=226999|HGNC=|MCL_coexpression_id=24|UniProt=Q3ZAS0,Q3TM63|association_with_transcript=-105bp_to_ENSMUST00000027231,NM_001033289,uc007aum.1,uc007aun.1_5end|description=CAGE_peak_1_at_Slc9a2_5end|id=chr1:40738416..40738451,+|ontology_enrichment_celltype=CL:0002563!3.81e-07!9;CL:0002251!3.81e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,5.75e-09,9;CL:0002251,5.75e-09,9;CL:0002076,1.42e-07,15;CL:0000066,2.08e-07,25;CL:0000075,2.63e-07,7;CL:0000239,6.98e-07,6;CL:0000677,6.98e-07,6;CL:0000584,6.98e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.72e-11!15;UBERON:0001242!7.39e-10!13;UBERON:0000060!7.39e-10!13;UBERON:0001262!7.39e-10!13;UBERON:0004786!7.39e-10!13;UBERON:0000485!1.14e-07!11;UBERON:0003350!3.81e-07!9;UBERON:0004808!3.81e-07!9;UBERON:0001277!3.81e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.33e-17,31;UBERON:0005409,6.03e-16,47;UBERON:0000344,2.84e-14,15;UBERON:0001242,1.49e-12,13;UBERON:0001262,1.49e-12,13;UBERON:0004786,1.49e-12,13;UBERON:0000485,1.17e-09,11;UBERON:0003350,5.75e-09,9;UBERON:0004808,5.75e-09,9;UBERON:0001277,5.75e-09,9;UBERON:0004923,1.30e-07,24|phase1_expression=2.24208385946712,99.1090157695785,71.4348805841572,129.75714665063,158.783946392992,18.8024784541317,18.221785966451,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,31.6784997130945,48.1759490241057,79.2440110478728,41.3531516312712,35.9836958585435,60.6174708065833,50.910086211506,33.7030376196063,0,0,0,7.51014211353314,8.97667084935859,8.77928231928187,0,0,0,0,0,0,0.125896817975577,0,0,3.9119567217402,0.218025156380447,1.31811709640683,0.777719596297134,2.09979632438044,1.43752564364972,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,1.14260393761521,0.220868540951614,0,0,0,1.10115880999389,0,0,0,0.0914876436024097,0,1.3959149950069,2.8138130501584,1.5279824777681,0.294628585473668,0.427115042397309,0,0.530083353332288,0.0755715601067855,0,0,0,0,0,0,4.91555470461132,0,0,0,3.09855523508697,0,0,0,3.24736561516821,4.56047757855178,5.05524445014783,11.6467557313441,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.125666591329675,0,0.289198713839823,2.65383165584962,6.30890714794896,4.19598885074748,2.42437626567611,74.5567044872489,0.585561594023094,0.628340120440365,38.3185582812887,0.239630249011841,0,0,0.748953197024114,0.457500602818626,0,1.39059456153821,1.02286182932132,0.62336413367868,0.973447578406546,0.305518091550949,2.11491850037158,4.54900965180614,1.47309299120532,0,0,0,0.30140963567143,0,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.583826711835847,0.493679549740441,0.492502392237286,0.324275238183423,0.877199924551994,0.219550115291051,1.07365135008297,1.05144974282064,0.102904612379284,83.2655333119171,34.1141230995972,0,0,0.128867461322093,0,0.889512175379481,1.90225626112559,43.1821446005506,4.11747386810027,5.27803938480566,6.76452004939913,5.8489226135736,35.9527763461689,41.4985055759413,42.4170912031802,0.379335801906163,0.114248512609729,2.25415471346161,0.814605311381257,0.969762435838129,2.38461787627083,3.79419222745544,5.75679577120448,5.33795674660674,5.67626954040282,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0.538192240565737,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,0,3.93411418415229,1.10374698521893,1.28440471990234,0.468846746368813,0,19.9452032491455,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,1.60660658210904,0.425820255624806,0,0.325773918707152,0.164970122972535,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,2.04263763452273,0,0,0,0.886701168211368,1.07021290561242,0.822745103010605,1.2178597964584,0,2.96564899209348,14.1138174755176,1.97863503529776,0.807322133479528,0.844380948994182,0.835606408021955,1.64140899745061,24.1929094402776,1.11255181206306,0,0,0,0,0,0,0.849892149969277,0,1.10559979043539,14.3200592702267,0,0.609958401380546,1.72808545314882,3.13632444021703,3.9305261474312,3.77620169877498,6.11635572367486,17.0141362289619,97.3408449421364,6.21339313086926,0.56369293868419,1.04661582230785,0.330916980914195,0,0,0.506868376472335,0,0.2604087696879,0,0.966336483304024,4.03242008761012,1.58005560314089,0.608175645870493,0.821687657318618,0.51968329191118,0.537080087002444,0.79472541912506,0.961563596159751,0.590758108698309,0.504832249740738,0.533447646584999,0.201652370273681,0.877120926657772,0.962118416403295,0.467507608726276,4.76133805591944,0.221985953374065,0,0,3.09103350451505,1.31377732815827,0,0.214368379079066,30.0943262421218,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0.729320151204882,0,0.367687016900028,1.33348036680969,1.85431551515005,2.88827288632634,2.52697211763797,3.04175159868288,1.13175804831646,2.52832070168682,2.56100609619477,2.52716063404698,1.90517476513229,1.27472758539341,3.08654752741928,2.88460130562315,1.47198920134397,1.37147700954166,1.4198064492747,0.953744759789284,1.59881058295561,1.97629698872194,2.11536519729191,1.28049581010941,2.36762740294059,1.62964936615034,3.36685362994643,2.72860541685601,1.87158516513571,2.04615521584845,2.47898945897546,0.964533054905707,1.24905288968973,2.33931608445408,2.36358159453128,2.86932498103265,2.8676884485537,4.63735671240843|short_description=p1@Slc9a2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:226999 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3ZAS0,uniprot:Q3TM63 | |||
|association_with_transcript=-105bp_to_ENSMUST00000027231,NM_001033289,uc007aum.1,uc007aun.1_5end | |||
|cluster_id=chr1:40738416..40738451,+ | |||
|description=CAGE_peak_1_at_Slc9a2_5end | |||
|id=chr1:40738416..40738451,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.81e-07!9;CL:0002251!3.81e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.75e-09,9;CL:0002251,5.75e-09,9;CL:0002076,1.42e-07,15;CL:0000066,2.08e-07,25;CL:0000075,2.63e-07,7;CL:0000239,6.98e-07,6;CL:0000677,6.98e-07,6;CL:0000584,6.98e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.72e-11!15;UBERON:0001242!7.39e-10!13;UBERON:0000060!7.39e-10!13;UBERON:0001262!7.39e-10!13;UBERON:0004786!7.39e-10!13;UBERON:0000485!1.14e-07!11;UBERON:0003350!3.81e-07!9;UBERON:0004808!3.81e-07!9;UBERON:0001277!3.81e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.33e-17,31;UBERON:0005409,6.03e-16,47;UBERON:0000344,2.84e-14,15;UBERON:0001242,1.49e-12,13;UBERON:0001262,1.49e-12,13;UBERON:0004786,1.49e-12,13;UBERON:0000485,1.17e-09,11;UBERON:0003350,5.75e-09,9;UBERON:0004808,5.75e-09,9;UBERON:0001277,5.75e-09,9;UBERON:0004923,1.30e-07,24 | |||
|phase1_expression=2.24208385946712,99.1090157695785,71.4348805841572,129.75714665063,158.783946392992,18.8024784541317,18.221785966451,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,31.6784997130945,48.1759490241057,79.2440110478728,41.3531516312712,35.9836958585435,60.6174708065833,50.910086211506,33.7030376196063,0,0,0,7.51014211353314,8.97667084935859,8.77928231928187,0,0,0,0,0,0,0.125896817975577,0,0,3.9119567217402,0.218025156380447,1.31811709640683,0.777719596297134,2.09979632438044,1.43752564364972,0,0,0,0,0.286533439938757,1.03134418455488,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0,0,0.103689612308478,0,0,1.14260393761521,0.220868540951614,0,0,0,1.10115880999389,0,0,0,0.0914876436024097,0,1.3959149950069,2.8138130501584,1.5279824777681,0.294628585473668,0.427115042397309,0,0.530083353332288,0.0755715601067855,0,0,0,0,0,0,4.91555470461132,0,0,0,3.09855523508697,0,0,0,3.24736561516821,4.56047757855178,5.05524445014783,11.6467557313441,0.258937883647172,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.125666591329675,0,0.289198713839823,2.65383165584962,6.30890714794896,4.19598885074748,2.42437626567611,74.5567044872489,0.585561594023094,0.628340120440365,38.3185582812887,0.239630249011841,0,0,0.748953197024114,0.457500602818626,0,1.39059456153821,1.02286182932132,0.62336413367868,0.973447578406546,0.305518091550949,2.11491850037158,4.54900965180614,1.47309299120532,0,0,0,0.30140963567143,0,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0,0,0.278047249225598,0.696504333044333,0.205782136407943,0.398068533636986,0.702213187313235,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.583826711835847,0.493679549740441,0.492502392237286,0.324275238183423,0.877199924551994,0.219550115291051,1.07365135008297,1.05144974282064,0.102904612379284,83.2655333119171,34.1141230995972,0,0,0.128867461322093,0,0.889512175379481,1.90225626112559,43.1821446005506,4.11747386810027,5.27803938480566,6.76452004939913,5.8489226135736,35.9527763461689,41.4985055759413,42.4170912031802,0.379335801906163,0.114248512609729,2.25415471346161,0.814605311381257,0.969762435838129,2.38461787627083,3.79419222745544,5.75679577120448,5.33795674660674,5.67626954040282,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0.538192240565737,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0.345369963731791,0.289298117163023,0,0,3.93411418415229,1.10374698521893,1.28440471990234,0.468846746368813,0,19.9452032491455,0,0.390438744296638,0,0,0.222798674082394,0,0,0,0,1.60660658210904,0.425820255624806,0,0.325773918707152,0.164970122972535,0,0,0,0,0.295301892880773,0,0.516856586336442,0,0,0,0,0,2.04263763452273,0,0,0,0.886701168211368,1.07021290561242,0.822745103010605,1.2178597964584,0,2.96564899209348,14.1138174755176,1.97863503529776,0.807322133479528,0.844380948994182,0.835606408021955,1.64140899745061,24.1929094402776,1.11255181206306,0,0,0,0,0,0,0.849892149969277,0,1.10559979043539,14.3200592702267,0,0.609958401380546,1.72808545314882,3.13632444021703,3.9305261474312,3.77620169877498,6.11635572367486,17.0141362289619,97.3408449421364,6.21339313086926,0.56369293868419,1.04661582230785,0.330916980914195,0,0,0.506868376472335,0,0.2604087696879,0,0.966336483304024,4.03242008761012,1.58005560314089,0.608175645870493,0.821687657318618,0.51968329191118,0.537080087002444,0.79472541912506,0.961563596159751,0.590758108698309,0.504832249740738,0.533447646584999,0.201652370273681,0.877120926657772,0.962118416403295,0.467507608726276,4.76133805591944,0.221985953374065,0,0,3.09103350451505,1.31377732815827,0,0.214368379079066,30.0943262421218,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.453142408984205,0,0,0,0,0.729320151204882,0,0.367687016900028,1.33348036680969,1.85431551515005,2.88827288632634,2.52697211763797,3.04175159868288,1.13175804831646,2.52832070168682,2.56100609619477,2.52716063404698,1.90517476513229,1.27472758539341,3.08654752741928,2.88460130562315,1.47198920134397,1.37147700954166,1.4198064492747,0.953744759789284,1.59881058295561,1.97629698872194,2.11536519729191,1.28049581010941,2.36762740294059,1.62964936615034,3.36685362994643,2.72860541685601,1.87158516513571,2.04615521584845,2.47898945897546,0.964533054905707,1.24905288968973,2.33931608445408,2.36358159453128,2.86932498103265,2.8676884485537,4.63735671240843 | |||
|short_description=p1@Slc9a2 | |||
}} |
Revision as of 16:13, 5 August 2015
Short description: | p1@Slc9a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc9a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | -105bp_to_ENSMUST00000027231, NM_001033289, uc007aum.1, uc007aun.1_5end |
EntrezGene: | 226999 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.75e-09 | 9 |
epithelial cell of alimentary canal | 5.75e-09 | 9 |
endo-epithelial cell | 1.42e-07 | 15 |
epithelial cell | 2.08e-07 | 25 |
columnar/cuboidal epithelial cell | 2.63e-07 | 7 |
brush border epithelial cell | 6.98e-07 | 6 |
gut absorptive cell | 6.98e-07 | 6 |
enterocyte | 6.98e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.33e-17 | 31 |
gastrointestinal system | 6.03e-16 | 47 |
mucosa | 2.84e-14 | 15 |
intestinal mucosa | 1.49e-12 | 13 |
wall of intestine | 1.49e-12 | 13 |
gastrointestinal system mucosa | 1.49e-12 | 13 |
simple columnar epithelium | 1.17e-09 | 11 |
epithelium of mucosa | 5.75e-09 | 9 |
gastrointestinal system epithelium | 5.75e-09 | 9 |
intestinal epithelium | 5.75e-09 | 9 |
organ component layer | 1.30e-07 | 24 |