FFCP PHASE1:Mm9::chr16:18811731..18811736,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=12544|HGNC=|MCL_coexpression_id=49|UniProt=F8WJ72,Q9Z1X9|association_with_transcript=0bp_to_NM_001161623_5end|description=CAGE_peak_3_at_Cdc45_5end|id=chr16:18811731..18811736,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.79e-10,29;UBERON:0005057,1.79e-10,29;UBERON:0002390,6.42e-09,45;UBERON:0003061,6.42e-09,45;UBERON:0001048,7.06e-09,134;UBERON:0003081,9.08e-09,87;UBERON:0002106,5.48e-08,6;UBERON:0004457,5.48e-08,6;UBERON:0000042,5.48e-08,6;UBERON:0004854,5.48e-08,6;UBERON:0009034,5.48e-08,6;UBERON:0002095,5.48e-08,6;UBERON:0004782,5.48e-08,6;UBERON:0003281,5.48e-08,6;UBERON:0009664,5.48e-08,6;UBERON:0002296,5.48e-08,6;UBERON:0005602,5.48e-08,6;UBERON:0001179,5.48e-08,6;UBERON:0006293,5.48e-08,6;UBERON:0002193,6.24e-08,48;UBERON:0002405,6.24e-08,48;UBERON:0000077,1.04e-07,35;UBERON:0000926,1.81e-07,120;UBERON:0004120,1.81e-07,120;UBERON:0006603,1.81e-07,120;UBERON:0001041,5.17e-07,80;UBERON:0003887,9.15e-07,10|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,2.33176833270964,2.02475267389826,1.39912375625629,0,0.548457734422955,0,0.255129870453209,1.09220046320974,1.82839852397255,0.319984845586813,0.45881856213434,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,2.54012269383853,1.23012957516914,0,0.866554859253824,1.49611180822643,0.612508068787107,0.837063261473815,0.7813353445238,2.09409497589519,0,1.36609096991689,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.630974884054146,0.285650984403804,0,0.979926393719632,1.24599112323707,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.302904773332736,1.66257432234928,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0.422530259330042,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0.517875767294343,0.148442139064825,1.04091196059682,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,1.13236794963186,0.662524555381181,3.39412677194655,0,0,0,1.02182822083437,1.31796636956512,2.99951365496704,0.508280908292259,0,0.457500602818626,0.125654352112864,0,0,0,0,0.611036183101898,1.36847667671102,0,0,2.73252930221678,0.919608417733892,0.540186389416048,1.80845781402858,0.816437989815934,0.768682321709099,0.374806898238915,0,1.94011193639558,0.378212160335639,1.58356011747554,0.876782929710299,1.11218899690239,1.0447564995665,0.205782136407943,0.995171334092466,0,1.28673953557358,1.13665399758237,2.07125772535502,0.469052119962192,1.62055855314913,2.3674473558521,1.57411385397923,1.54267112887378,0.930135779001631,0.536546802799238,0.350296027101508,1.15191894939436,0.656669856316381,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0.264450566663544,1.70630600428187,1.62565670302307,0.515469845288373,1.4117846723634,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,1.32767530667157,0.685491075658373,3.38123207019241,0.203651327845314,1.16371492300575,0.280543279561274,0.505892296994058,0,0.156998727841375,0.123397163921801,0,2.33583148002532,2.16214894624523,1.57403478669398,1.21716072833102,1.68824011826692,1.78238096246994,1.43848068725405,0.648540907100142,0.823684239564244,2.87536413054709,0,0,0,0.179397413521912,0,0,1.70542270593436,0.977789858652155,1.69745085775188,0.469380496577004,0.670025029767263,0.238043640886014,0,0.472905432318573,0.221464689648775,0.159454768657487,0,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.668396022247182,0,0.809621403349789,0.584511715822624,0,0,0.141940085208269,1.24645922567079,0.162886959353576,0,0,1.45668381692989,2.11626489875326,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.712994756769443,0,0,0,0,1.08036656418786,0.388076051348264,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0.16488625294148,0.484393280087717,0.72375509913787,0.596861720015682,0.328281799490123,0.291480836629851,0,2.9048049735635,1.65109494370578,1.66675074632741,3.39063222608444,2.32380187125743,1.83022538565218,0.849892149969277,0.139951452323658,0.276399947608848,0,1.26534397432454,1.01659733563424,1.18805874903981,1.25452977608681,0.655087691238533,0.944050424693745,0.247960367176008,0.523511883968059,0.129614973291793,0,1.12738587736838,1.04661582230785,1.98550188548517,0.777804753376191,0.904118764344118,0.844780627453891,1.29092962510329,0.651021924219751,1.25831213310853,0.483168241652012,0.288030006257865,1.58005560314089,1.21635129174099,1.33524244314275,1.55904987573354,1.25318686967237,1.78813219303138,2.52410443991935,1.62458479892035,1.71642964911851,2.13379058634,1.51239277705261,1.46186821109629,2.21287235772758,0.584384510907845,0,0.887943813496259,1.34570784914214,1.00730769818447,0,0.187682475451182,0,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.399024873401031,0.682934423016537,1.45864030240976,0.838452650511929,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.448176066834085,0.402048282689293,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,1.12228454331548,0.593175090620871,0.591026894253381,0.409231043169689,0.154936841185966,0.964533054905707,0.249810577937946,0.467863216890817,0,0.57386499620653,0.441182838239031,0.463735671240843|short_description=p3@Cdc45}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12544 | |||
|HGNC= | |||
|MCL_coexpression_id=49 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WJ72,uniprot:Q9Z1X9 | |||
|association_with_transcript=0bp_to_NM_001161623_5end | |||
|cluster_id=chr16:18811731..18811736,- | |||
|description=CAGE_peak_3_at_Cdc45_5end | |||
|id=chr16:18811731..18811736,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.79e-10,29;UBERON:0005057,1.79e-10,29;UBERON:0002390,6.42e-09,45;UBERON:0003061,6.42e-09,45;UBERON:0001048,7.06e-09,134;UBERON:0003081,9.08e-09,87;UBERON:0002106,5.48e-08,6;UBERON:0004457,5.48e-08,6;UBERON:0000042,5.48e-08,6;UBERON:0004854,5.48e-08,6;UBERON:0009034,5.48e-08,6;UBERON:0002095,5.48e-08,6;UBERON:0004782,5.48e-08,6;UBERON:0003281,5.48e-08,6;UBERON:0009664,5.48e-08,6;UBERON:0002296,5.48e-08,6;UBERON:0005602,5.48e-08,6;UBERON:0001179,5.48e-08,6;UBERON:0006293,5.48e-08,6;UBERON:0002193,6.24e-08,48;UBERON:0002405,6.24e-08,48;UBERON:0000077,1.04e-07,35;UBERON:0000926,1.81e-07,120;UBERON:0004120,1.81e-07,120;UBERON:0006603,1.81e-07,120;UBERON:0001041,5.17e-07,80;UBERON:0003887,9.15e-07,10 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0.467225281191051,0,0,0,0,0,0,0.0874204024189974,2.33176833270964,2.02475267389826,1.39912375625629,0,0.548457734422955,0,0.255129870453209,1.09220046320974,1.82839852397255,0.319984845586813,0.45881856213434,0,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0.443461021310609,2.54012269383853,1.23012957516914,0,0.866554859253824,1.49611180822643,0.612508068787107,0.837063261473815,0.7813353445238,2.09409497589519,0,1.36609096991689,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0.436050312760893,0.439372365468944,0.194429899074283,0.279972843250725,0,0.167782606057736,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.540023753326763,0.630974884054146,0.285650984403804,0,0.979926393719632,1.24599112323707,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.302904773332736,1.66257432234928,0,0,0,0,0,0,0.280888840263504,0.511290967734173,0,0,0.422530259330042,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0.517875767294343,0.148442139064825,1.04091196059682,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.376999773989026,0,0,0,1.13236794963186,0.662524555381181,3.39412677194655,0,0,0,1.02182822083437,1.31796636956512,2.99951365496704,0.508280908292259,0,0.457500602818626,0.125654352112864,0,0,0,0,0.611036183101898,1.36847667671102,0,0,2.73252930221678,0.919608417733892,0.540186389416048,1.80845781402858,0.816437989815934,0.768682321709099,0.374806898238915,0,1.94011193639558,0.378212160335639,1.58356011747554,0.876782929710299,1.11218899690239,1.0447564995665,0.205782136407943,0.995171334092466,0,1.28673953557358,1.13665399758237,2.07125772535502,0.469052119962192,1.62055855314913,2.3674473558521,1.57411385397923,1.54267112887378,0.930135779001631,0.536546802799238,0.350296027101508,1.15191894939436,0.656669856316381,0.0810688095458557,0,0.219550115291051,0,0,0.411618449517138,0,0.264450566663544,1.70630600428187,1.62565670302307,0.515469845288373,1.4117846723634,0.667134131534611,0.380451252225118,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0,0.216138049874694,0.398282546508734,1.32767530667157,0.685491075658373,3.38123207019241,0.203651327845314,1.16371492300575,0.280543279561274,0.505892296994058,0,0.156998727841375,0.123397163921801,0,2.33583148002532,2.16214894624523,1.57403478669398,1.21716072833102,1.68824011826692,1.78238096246994,1.43848068725405,0.648540907100142,0.823684239564244,2.87536413054709,0,0,0,0.179397413521912,0,0,1.70542270593436,0.977789858652155,1.69745085775188,0.469380496577004,0.670025029767263,0.238043640886014,0,0.472905432318573,0.221464689648775,0.159454768657487,0,0.345369963731791,0,0,0,0.491764273019036,0,0,0,0.163934945376675,0.252470927204373,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,0.668396022247182,0,0.809621403349789,0.584511715822624,0,0,0.141940085208269,1.24645922567079,0.162886959353576,0,0,1.45668381692989,2.11626489875326,0.377210159511796,0.295301892880773,0.614870295887855,0,0,0.712994756769443,0,0,0,0,1.08036656418786,0.388076051348264,0.214337035031592,0.532020700926821,0.178368817602071,0.164549020602121,0,0.469343416127421,0,0,0.16488625294148,0.484393280087717,0.72375509913787,0.596861720015682,0.328281799490123,0.291480836629851,0,2.9048049735635,1.65109494370578,1.66675074632741,3.39063222608444,2.32380187125743,1.83022538565218,0.849892149969277,0.139951452323658,0.276399947608848,0,1.26534397432454,1.01659733563424,1.18805874903981,1.25452977608681,0.655087691238533,0.944050424693745,0.247960367176008,0.523511883968059,0.129614973291793,0,1.12738587736838,1.04661582230785,1.98550188548517,0.777804753376191,0.904118764344118,0.844780627453891,1.29092962510329,0.651021924219751,1.25831213310853,0.483168241652012,0.288030006257865,1.58005560314089,1.21635129174099,1.33524244314275,1.55904987573354,1.25318686967237,1.78813219303138,2.52410443991935,1.62458479892035,1.71642964911851,2.13379058634,1.51239277705261,1.46186821109629,2.21287235772758,0.584384510907845,0,0.887943813496259,1.34570784914214,1.00730769818447,0,0.187682475451182,0,0.643105137237198,1.00314420807073,0,0,0,0,0,0,0,0,0,0,1.14166082342594,0.399024873401031,0.682934423016537,1.45864030240976,0.838452650511929,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.377252682772152,0.280924522409647,0.448176066834085,0.402048282689293,0,0.115884325944855,0.38581844092741,0.412085900803307,0.441596760403192,0,0,0.238436189947321,0.290692833264657,0.376437521661322,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,1.12228454331548,0.593175090620871,0.591026894253381,0.409231043169689,0.154936841185966,0.964533054905707,0.249810577937946,0.467863216890817,0,0.57386499620653,0.441182838239031,0.463735671240843 | |||
|short_description=p3@Cdc45 | |||
}} |
Revision as of 03:22, 6 August 2015
Short description: | p3@Cdc45 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cdc45_5end |
Coexpression cluster: | MCL_coexpression_mm9:49 |
Association with transcript: | 0bp_to_NM_001161623_5end |
EntrezGene: | 12544 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.79e-10 | 29 |
immune organ | 1.79e-10 | 29 |
hematopoietic system | 6.42e-09 | 45 |
blood island | 6.42e-09 | 45 |
primordium | 7.06e-09 | 134 |
lateral plate mesoderm | 9.08e-09 | 87 |
spleen | 5.48e-08 | 6 |
cavity lining | 5.48e-08 | 6 |
serous membrane | 5.48e-08 | 6 |
gastrointestinal system mesentery | 5.48e-08 | 6 |
stomach region | 5.48e-08 | 6 |
mesentery | 5.48e-08 | 6 |
gastrointestinal system serosa | 5.48e-08 | 6 |
mesentery of stomach | 5.48e-08 | 6 |
gut mesentery | 5.48e-08 | 6 |
dorsal mesentery | 5.48e-08 | 6 |
dorsal mesogastrium | 5.48e-08 | 6 |
peritoneal cavity | 5.48e-08 | 6 |
spleen primordium | 5.48e-08 | 6 |
hemolymphoid system | 6.24e-08 | 48 |
immune system | 6.24e-08 | 48 |
mixed endoderm/mesoderm-derived structure | 1.04e-07 | 35 |
mesoderm | 1.81e-07 | 120 |
mesoderm-derived structure | 1.81e-07 | 120 |
presumptive mesoderm | 1.81e-07 | 120 |
foregut | 5.17e-07 | 80 |
intraembryonic coelom | 9.15e-07 | 10 |