FFCP PHASE1:Mm9::chr6:82998517..82998522,+: Difference between revisions
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{{FFCP|EntrezGene=16950|HGNC=|MCL_coexpression_id=58|UniProt=|association_with_transcript=-49bp_to_uc012env.1_5end|description=CAGE_peak_2_at_Loxl3_5end|id=chr6:82998517..82998522,+|ontology_enrichment_celltype=CL:0000473!1.30e-21!3;CL:0000627!1.30e-21!3;CL:0000682!1.30e-21!3;CL:0000239!1.32e-18!6;CL:0000677!1.32e-18!6;CL:0000212!1.32e-18!6;CL:0000584!1.32e-18!6;CL:0000075!5.35e-16!7;CL:0000066!4.19e-13!25;CL:0002563!1.64e-12!9;CL:0002251!1.64e-12!9;CL:0002076!1.34e-07!15|ontology_enrichment_celltype_v019_2=CL:0000682,4.54e-30,3;CL:0000239,4.83e-26,6;CL:0000677,4.83e-26,6;CL:0000584,4.83e-26,6;CL:0000075,2.12e-22,7;CL:0000066,6.33e-19,25;CL:0002563,1.55e-17,9;CL:0002251,1.55e-17,9;CL:0000473,2.54e-13,7;CL:0002076,1.08e-10,15;CL:0000223,4.18e-08,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.56e-22!15;UBERON:0001962!2.68e-14!2;UBERON:0001961!2.68e-14!2;UBERON:0001744!2.68e-14!2;UBERON:0004923!1.56e-13!24;UBERON:0001242!2.38e-13!13;UBERON:0000060!2.38e-13!13;UBERON:0001262!2.38e-13!13;UBERON:0004786!2.38e-13!13;UBERON:0003350!1.64e-12!9;UBERON:0004808!1.64e-12!9;UBERON:0001277!1.64e-12!9;UBERON:0000485!2.77e-10!11;UBERON:0002465!7.57e-10!3;UBERON:0003199!6.57e-08!1|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.21e-23,15;UBERON:0001242,6.77e-19,13;UBERON:0001262,6.77e-19,13;UBERON:0004786,6.77e-19,13;UBERON:0003350,1.55e-17,9;UBERON:0004808,1.55e-17,9;UBERON:0001277,1.55e-17,9;UBERON:0004923,1.52e-14,24;UBERON:0000485,1.97e-14,11;UBERON:0000160,5.10e-08,31|phase1_expression=0,1.74487703819681,1.36499771816861,0,0,2.51818907867835,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.45881856213434,2.29692785646008,2.58457197695445,3.01659725760245,0,0,4.6563407237614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p2@Loxl3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16950 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-49bp_to_uc012env.1_5end | |||
|cluster_id=chr6:82998517..82998522,+ | |||
|description=CAGE_peak_2_at_Loxl3_5end | |||
|id=chr6:82998517..82998522,+ | |||
|ontology_enrichment_celltype=CL:0000473!1.30e-21!3;CL:0000627!1.30e-21!3;CL:0000682!1.30e-21!3;CL:0000239!1.32e-18!6;CL:0000677!1.32e-18!6;CL:0000212!1.32e-18!6;CL:0000584!1.32e-18!6;CL:0000075!5.35e-16!7;CL:0000066!4.19e-13!25;CL:0002563!1.64e-12!9;CL:0002251!1.64e-12!9;CL:0002076!1.34e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.54e-30,3;CL:0000239,4.83e-26,6;CL:0000677,4.83e-26,6;CL:0000584,4.83e-26,6;CL:0000075,2.12e-22,7;CL:0000066,6.33e-19,25;CL:0002563,1.55e-17,9;CL:0002251,1.55e-17,9;CL:0000473,2.54e-13,7;CL:0002076,1.08e-10,15;CL:0000223,4.18e-08,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.56e-22!15;UBERON:0001962!2.68e-14!2;UBERON:0001961!2.68e-14!2;UBERON:0001744!2.68e-14!2;UBERON:0004923!1.56e-13!24;UBERON:0001242!2.38e-13!13;UBERON:0000060!2.38e-13!13;UBERON:0001262!2.38e-13!13;UBERON:0004786!2.38e-13!13;UBERON:0003350!1.64e-12!9;UBERON:0004808!1.64e-12!9;UBERON:0001277!1.64e-12!9;UBERON:0000485!2.77e-10!11;UBERON:0002465!7.57e-10!3;UBERON:0003199!6.57e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.21e-23,15;UBERON:0001242,6.77e-19,13;UBERON:0001262,6.77e-19,13;UBERON:0004786,6.77e-19,13;UBERON:0003350,1.55e-17,9;UBERON:0004808,1.55e-17,9;UBERON:0001277,1.55e-17,9;UBERON:0004923,1.52e-14,24;UBERON:0000485,1.97e-14,11;UBERON:0000160,5.10e-08,31 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,0,0,2.51818907867835,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.45881856213434,2.29692785646008,2.58457197695445,3.01659725760245,0,0,4.6563407237614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@Loxl3 | |||
}} |
Revision as of 04:05, 6 August 2015
Short description: | p2@Loxl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Loxl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | -49bp_to_uc012env.1_5end |
EntrezGene: | 16950 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.54e-30 | 3 |
brush border epithelial cell | 4.83e-26 | 6 |
gut absorptive cell | 4.83e-26 | 6 |
enterocyte | 4.83e-26 | 6 |
columnar/cuboidal epithelial cell | 2.12e-22 | 7 |
epithelial cell | 6.33e-19 | 25 |
intestinal epithelial cell | 1.55e-17 | 9 |
epithelial cell of alimentary canal | 1.55e-17 | 9 |
defensive cell | 2.54e-13 | 7 |
endo-epithelial cell | 1.08e-10 | 15 |
endodermal cell | 4.18e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.21e-23 | 15 |
intestinal mucosa | 6.77e-19 | 13 |
wall of intestine | 6.77e-19 | 13 |
gastrointestinal system mucosa | 6.77e-19 | 13 |
epithelium of mucosa | 1.55e-17 | 9 |
gastrointestinal system epithelium | 1.55e-17 | 9 |
intestinal epithelium | 1.55e-17 | 9 |
organ component layer | 1.52e-14 | 24 |
simple columnar epithelium | 1.97e-14 | 11 |
intestine | 5.10e-08 | 31 |