FFCP PHASE1:Mm9::chr11:59005293..59005345,-: Difference between revisions
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{{FFCP|EntrezGene=14923|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=0bp_to_ENSMUST00000130815_5end|description=CAGE_peak_1_at_Guk1_5end|id=chr11:59005293..59005345,-|ontology_enrichment_celltype=CL:0002321!6.39e-11!70;CL:0000220!6.39e-11!70;CL:0000117!9.03e-11!23;CL:0000337!9.03e-11!23;CL:0000548!5.80e-10!115;CL:0000004!5.80e-10!115;CL:0000255!5.80e-10!115;CL:0002371!3.06e-09!118;CL:0000144!3.28e-08!121;CL:0000012!3.28e-08!121;CL:0000055!7.62e-07!50|ontology_enrichment_celltype_v019_2=CL:0002321,6.39e-11,70;CL:0000117,9.03e-11,23;CL:0000337,9.03e-11,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.88e-16!52;UBERON:0005068!1.88e-16!52;UBERON:0006241!1.88e-16!52;UBERON:0007135!1.88e-16!52;UBERON:0002020!1.08e-15!34;UBERON:0000955!6.29e-15!50;UBERON:0006238!6.29e-15!50;UBERON:0002616!6.41e-15!49;UBERON:0000073!1.16e-13!75;UBERON:0001016!1.16e-13!75;UBERON:0001017!1.37e-13!73;UBERON:0005743!1.37e-13!73;UBERON:0002791!1.41e-12!29;UBERON:0003528!1.41e-12!29;UBERON:0001893!1.41e-12!29;UBERON:0004111!3.42e-12!122;UBERON:0003080!9.65e-12!40;UBERON:0002780!3.06e-11!39;UBERON:0001890!3.06e-11!39;UBERON:0006240!3.06e-11!39;UBERON:0000025!6.50e-11!114;UBERON:0000033!2.69e-10!63;UBERON:0000956!5.15e-09!21;UBERON:0001869!5.15e-09!21;UBERON:0000203!5.15e-09!21;UBERON:0002619!2.00e-08!17;UBERON:0002346!1.53e-07!71;UBERON:0003075!1.53e-07!71;UBERON:0007284!1.53e-07!71;UBERON:0002021!2.80e-07!10;UBERON:0000411!2.80e-07!10;UBERON:0001950!2.80e-07!10;UBERON:0003056!5.94e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-18,54;UBERON:0001049,1.88e-16,52;UBERON:0005068,1.88e-16,52;UBERON:0006241,1.88e-16,52;UBERON:0007135,1.88e-16,52;UBERON:0002020,1.08e-15,34;UBERON:0001016,1.16e-13,75;UBERON:0001017,1.37e-13,73;UBERON:0000955,5.22e-13,47;UBERON:0006238,5.22e-13,47;UBERON:0002616,5.40e-13,46;UBERON:0003528,1.41e-12,29;UBERON:0002791,1.41e-12,29;UBERON:0001893,1.41e-12,29;UBERON:0004111,3.42e-12,122;UBERON:0003080,9.65e-12,40;UBERON:0002780,3.06e-11,39;UBERON:0001890,3.06e-11,39;UBERON:0006240,3.06e-11,39;UBERON:0000025,6.50e-11,114;UBERON:0010314,1.10e-09,92;UBERON:0002346,2.38e-09,64;UBERON:0003075,2.38e-09,64;UBERON:0007284,2.38e-09,64;UBERON:0000956,5.15e-09,21;UBERON:0001869,5.15e-09,21;UBERON:0000203,5.15e-09,21;UBERON:0002619,2.00e-08,17;UBERON:0004121,2.73e-07,95;UBERON:0000924,2.73e-07,95;UBERON:0006601,2.73e-07,95;UBERON:0002021,2.80e-07,10;UBERON:0000411,2.80e-07,10;UBERON:0001950,2.80e-07,10;UBERON:0003056,5.94e-07,49;UBERON:0010371,9.35e-07,73|phase1_expression=36.1936394456834,51.2993849229861,54.1449094873548,70.7766254457982,59.105696133669,44.6558863285627,44.3864017131499,33.4429407713682,17.5985902689583,17.0867104215055,42.9757100246018,48.5812448281599,22.9408978107816,25.3519167015092,27.3150004688843,27.3341610976265,23.0855419782288,24.2905867325843,20.5671650408608,29.7072756258621,42.691731655837,19.06386263057,21.4183827093927,37.1182420880703,41.0642613110234,55.700500519157,44.7992476005438,38.78482188346,42.7552693776841,47.1296342651071,59.4237768556217,28.5763803056834,22.1423323530445,31.6963362030877,47.9493688787116,61.6730534280007,48.3881374341815,20.0895182753716,28.9094077473806,12.0410461113974,21.7645650571475,18.442228093878,21.8479658864019,30.8447204040164,41.2604110063424,41.8486594928634,45.3786979721863,32.9217986134474,40.4222576231428,40.2469891083767,27.7173114818218,40.250718022192,18.7916518784665,23.9369506863744,17.1407837562657,28.0412785279182,41.5473487911197,35.0657022748661,45.1165707716903,56.6020347821075,51.3403436840005,32.8679196107058,30.2360230677787,60.2932810578537,52.4099172160496,58.9698495405263,36.5512134832454,56.8643091875901,30.2773667940755,41.1768111911656,39.1204428113571,115.402997699137,113.968167131033,38.8295833511404,34.6002150375833,55.1531271966013,135.442533629248,133.305580960936,121.04194820592,37.1919331399147,46.2012600192169,42.7148963856543,190.12362231994,157.010768198839,110.16753664708,81.0228610052586,79.5857695666985,62.0710154598251,33.6981560332669,26.9034753980156,21.1601076752225,54.2067042498273,35.358509352803,34.5410042648203,43.5350199689938,38.9783391774682,30.4764391685902,25.0532574189745,35.3308966259901,29.6805242588686,40.985435155014,32.0816193535795,28.028576367731,42.6640021891999,38.5354052999961,33.6968621081881,28.3093689208279,32.1998540807749,9.32176381129818,19.8912466346865,24.1144604204929,24.0527727866592,16.3737003051802,25.0199583317353,15.7568867561844,23.1226528046603,22.7419370315624,26.0278842455841,13.2691582792481,19.8973225435313,13.9130156630048,11.6370060752453,22.3670113461747,29.8636412951778,25.3430515244281,29.6330184041966,14.97689056324,32.9946502046374,20.3312363316904,62.0133247135966,66.3375874087008,49.0051973240171,50.930525816337,61.88314067394,75.0114840860012,63.4363338594932,21.895463227818,22.6420686510369,67.4769765017911,17.0457903268044,18.4771029007039,27.3583504275833,18.3663372401456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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14923 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000130815_5end | |||
|cluster_id=chr11:59005293..59005345,- | |||
|description=CAGE_peak_1_at_Guk1_5end | |||
|id=chr11:59005293..59005345,- | |||
|ontology_enrichment_celltype=CL:0002321!6.39e-11!70;CL:0000220!6.39e-11!70;CL:0000117!9.03e-11!23;CL:0000337!9.03e-11!23;CL:0000548!5.80e-10!115;CL:0000004!5.80e-10!115;CL:0000255!5.80e-10!115;CL:0002371!3.06e-09!118;CL:0000144!3.28e-08!121;CL:0000012!3.28e-08!121;CL:0000055!7.62e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,6.39e-11,70;CL:0000117,9.03e-11,23;CL:0000337,9.03e-11,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.88e-16!52;UBERON:0005068!1.88e-16!52;UBERON:0006241!1.88e-16!52;UBERON:0007135!1.88e-16!52;UBERON:0002020!1.08e-15!34;UBERON:0000955!6.29e-15!50;UBERON:0006238!6.29e-15!50;UBERON:0002616!6.41e-15!49;UBERON:0000073!1.16e-13!75;UBERON:0001016!1.16e-13!75;UBERON:0001017!1.37e-13!73;UBERON:0005743!1.37e-13!73;UBERON:0002791!1.41e-12!29;UBERON:0003528!1.41e-12!29;UBERON:0001893!1.41e-12!29;UBERON:0004111!3.42e-12!122;UBERON:0003080!9.65e-12!40;UBERON:0002780!3.06e-11!39;UBERON:0001890!3.06e-11!39;UBERON:0006240!3.06e-11!39;UBERON:0000025!6.50e-11!114;UBERON:0000033!2.69e-10!63;UBERON:0000956!5.15e-09!21;UBERON:0001869!5.15e-09!21;UBERON:0000203!5.15e-09!21;UBERON:0002619!2.00e-08!17;UBERON:0002346!1.53e-07!71;UBERON:0003075!1.53e-07!71;UBERON:0007284!1.53e-07!71;UBERON:0002021!2.80e-07!10;UBERON:0000411!2.80e-07!10;UBERON:0001950!2.80e-07!10;UBERON:0003056!5.94e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.27e-18,54;UBERON:0001049,1.88e-16,52;UBERON:0005068,1.88e-16,52;UBERON:0006241,1.88e-16,52;UBERON:0007135,1.88e-16,52;UBERON:0002020,1.08e-15,34;UBERON:0001016,1.16e-13,75;UBERON:0001017,1.37e-13,73;UBERON:0000955,5.22e-13,47;UBERON:0006238,5.22e-13,47;UBERON:0002616,5.40e-13,46;UBERON:0003528,1.41e-12,29;UBERON:0002791,1.41e-12,29;UBERON:0001893,1.41e-12,29;UBERON:0004111,3.42e-12,122;UBERON:0003080,9.65e-12,40;UBERON:0002780,3.06e-11,39;UBERON:0001890,3.06e-11,39;UBERON:0006240,3.06e-11,39;UBERON:0000025,6.50e-11,114;UBERON:0010314,1.10e-09,92;UBERON:0002346,2.38e-09,64;UBERON:0003075,2.38e-09,64;UBERON:0007284,2.38e-09,64;UBERON:0000956,5.15e-09,21;UBERON:0001869,5.15e-09,21;UBERON:0000203,5.15e-09,21;UBERON:0002619,2.00e-08,17;UBERON:0004121,2.73e-07,95;UBERON:0000924,2.73e-07,95;UBERON:0006601,2.73e-07,95;UBERON:0002021,2.80e-07,10;UBERON:0000411,2.80e-07,10;UBERON:0001950,2.80e-07,10;UBERON:0003056,5.94e-07,49;UBERON:0010371,9.35e-07,73 | |||
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| |||
|short_description=p1@Guk1 | |||
}} |
Revision as of 04:37, 6 August 2015
Short description: | p1@Guk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Guk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000130815_5end |
EntrezGene: | 14923 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 6.39e-11 | 70 |
CNS neuron (sensu Vertebrata) | 9.03e-11 | 23 |
neuroblast (sensu Vertebrata) | 9.03e-11 | 23 |