FFCP PHASE1:Mm9::chr5:135421891..135421901,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:135421891..135421901,-|id=chr5:135421891..135421901,-|ontology_enrichment_celltype=CL:0000068!9.40e-10!3;CL:0002202!9.40e-10!3;CL:0000069!9.40e-10!3;CL:0002632!9.40e-10!3;CL:0002368!9.40e-10!3;CL:0000307!9.40e-10!3;CL:0000377!9.40e-10!3|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-44,3;CL:0002202,1.18e-44,3;CL:0000069,1.18e-44,3;CL:0002632,1.18e-44,3;CL:0002368,1.18e-44,3;CL:0000307,1.18e-44,3;CL:0000377,1.18e-44,3;CL:0002076,1.32e-09,15;CL:0000223,2.26e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003126!9.40e-10!3;UBERON:0001005!9.40e-10!3;UBERON:0007196!9.40e-10!3;UBERON:0001558!9.40e-10!3;UBERON:0004175!3.14e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.18e-44,3;UBERON:0001005,1.18e-44,3;UBERON:0007196,1.18e-44,3;UBERON:0001558,1.18e-44,3;UBERON:0000998,9.51e-16,1;UBERON:0007194,9.51e-16,1;UBERON:0006868,9.51e-16,1;UBERON:0003199,1.33e-15,1;UBERON:0005178,1.48e-08,17;UBERON:0005181,1.48e-08,17;UBERON:0002224,1.48e-08,17;UBERON:0000915,1.48e-08,17;UBERON:0008947,1.48e-08,17;UBERON:0003258,1.48e-08,17;UBERON:0010147,1.53e-08,2;UBERON:0003937,1.53e-08,2;UBERON:0005399,1.53e-08,2;UBERON:0001962,1.81e-08,2;UBERON:0001961,1.81e-08,2;UBERON:0001744,1.81e-08,2|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.37645568640302,0,0,0.646413698057667,0.190023419456374,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19578498426914,3.29367825117628,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341908464944,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0,0,0.596861720015682,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:135421891..135421901,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:135421891..135421901,- | |||
|description=CAGE_peak_at_chr5:135421891..135421901,- | |||
|id=chr5:135421891..135421901,- | |||
|ontology_enrichment_celltype=CL:0000068!9.40e-10!3;CL:0002202!9.40e-10!3;CL:0000069!9.40e-10!3;CL:0002632!9.40e-10!3;CL:0002368!9.40e-10!3;CL:0000307!9.40e-10!3;CL:0000377!9.40e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.18e-44,3;CL:0002202,1.18e-44,3;CL:0000069,1.18e-44,3;CL:0002632,1.18e-44,3;CL:0002368,1.18e-44,3;CL:0000307,1.18e-44,3;CL:0000377,1.18e-44,3;CL:0002076,1.32e-09,15;CL:0000223,2.26e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!9.40e-10!3;UBERON:0001005!9.40e-10!3;UBERON:0007196!9.40e-10!3;UBERON:0001558!9.40e-10!3;UBERON:0004175!3.14e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.18e-44,3;UBERON:0001005,1.18e-44,3;UBERON:0007196,1.18e-44,3;UBERON:0001558,1.18e-44,3;UBERON:0000998,9.51e-16,1;UBERON:0007194,9.51e-16,1;UBERON:0006868,9.51e-16,1;UBERON:0003199,1.33e-15,1;UBERON:0005178,1.48e-08,17;UBERON:0005181,1.48e-08,17;UBERON:0002224,1.48e-08,17;UBERON:0000915,1.48e-08,17;UBERON:0008947,1.48e-08,17;UBERON:0003258,1.48e-08,17;UBERON:0010147,1.53e-08,2;UBERON:0003937,1.53e-08,2;UBERON:0005399,1.53e-08,2;UBERON:0001962,1.81e-08,2;UBERON:0001961,1.81e-08,2;UBERON:0001744,1.81e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47997726838022,1.37645568640302,0,0,0.646413698057667,0.190023419456374,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.19578498426914,3.29367825117628,4.54972000513305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341908464944,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0,0,0.596861720015682,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0.214368379079066,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:135421891..135421901,- | |||
}} |
Latest revision as of 09:58, 6 August 2015
Short description: | p@chr5:135421891..135421901, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135421891..135421901, - |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.18e-44 | 3 |
epithelial cell of tracheobronchial tree | 1.18e-44 | 3 |
branched duct epithelial cell | 1.18e-44 | 3 |
epithelial cell of lower respiratory tract | 1.18e-44 | 3 |
respiratory epithelial cell | 1.18e-44 | 3 |
tracheal epithelial cell | 1.18e-44 | 3 |
tracheoblast | 1.18e-44 | 3 |
endo-epithelial cell | 1.32e-09 | 15 |
endodermal cell | 2.26e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.18e-44 | 3 |
respiratory airway | 1.18e-44 | 3 |
tracheobronchial tree | 1.18e-44 | 3 |
lower respiratory tract | 1.18e-44 | 3 |
seminal vesicle | 9.51e-16 | 1 |
vesicular gland | 9.51e-16 | 1 |
seminal fluid secreting gland | 9.51e-16 | 1 |
egg chamber | 1.33e-15 | 1 |
thoracic cavity element | 1.48e-08 | 17 |
thoracic segment organ | 1.48e-08 | 17 |
thoracic cavity | 1.48e-08 | 17 |
thoracic segment of trunk | 1.48e-08 | 17 |
respiratory primordium | 1.48e-08 | 17 |
endoderm of foregut | 1.48e-08 | 17 |
male accessory sex gland | 1.53e-08 | 2 |
sex gland | 1.53e-08 | 2 |
male reproductive gland | 1.53e-08 | 2 |
gut-associated lymphoid tissue | 1.81e-08 | 2 |
mucosa-associated lymphoid tissue | 1.81e-08 | 2 |
lymphoid tissue | 1.81e-08 | 2 |