FFCP PHASE1:Mm9::chrX:92361682..92361765,-: Difference between revisions
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{{FFCP|EntrezGene=236915|HGNC=|MCL_coexpression_id=1|UniProt=Q3UTH8,B1AXI4|association_with_transcript=0bp_to_ENSMUST00000113876,ENSMUST00000113883,ENSMUST00000113885,uc009ttt.1_5end|description=CAGE_peak_2_at_Arhgef9_5end|id=chrX:92361682..92361765,-|ontology_enrichment_celltype=CL:0000540!5.48e-13!33;CL:0000047!5.48e-13!33;CL:0000031!5.48e-13!33;CL:0000404!5.48e-13!33;CL:0000117!1.98e-11!23;CL:0000337!1.98e-11!23;CL:0000393!3.51e-11!39;CL:0000211!3.51e-11!39;CL:0000221!2.01e-10!44;CL:0000133!2.01e-10!44;CL:0002319!5.83e-10!43;CL:0000055!7.99e-09!50|ontology_enrichment_celltype_v019_2=CL:0000540,5.42e-15,33;CL:0000047,5.42e-15,33;CL:0000031,5.42e-15,33;CL:0000404,5.42e-15,33;CL:0000117,5.24e-13,23;CL:0000337,5.24e-13,23;CL:0000393,1.87e-12,39;CL:0000211,1.87e-12,39;CL:0000221,9.99e-12,44;CL:0000133,9.99e-12,44;CL:0002319,3.60e-11,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.27e-26!73;UBERON:0005743!1.27e-26!73;UBERON:0000073!7.28e-26!75;UBERON:0001016!7.28e-26!75;UBERON:0000033!1.75e-25!63;UBERON:0002346!1.01e-24!71;UBERON:0003075!1.01e-24!71;UBERON:0007284!1.01e-24!71;UBERON:0004121!2.26e-24!102;UBERON:0000924!2.26e-24!102;UBERON:0006601!2.26e-24!102;UBERON:0001049!4.55e-23!52;UBERON:0005068!4.55e-23!52;UBERON:0006241!4.55e-23!52;UBERON:0007135!4.55e-23!52;UBERON:0000955!2.41e-22!50;UBERON:0006238!2.41e-22!50;UBERON:0002616!1.19e-21!49;UBERON:0003056!2.69e-20!49;UBERON:0002020!1.21e-18!34;UBERON:0003080!3.87e-18!40;UBERON:0002780!1.54e-17!39;UBERON:0001890!1.54e-17!39;UBERON:0006240!1.54e-17!39;UBERON:0007811!3.17e-16!86;UBERON:0002791!4.28e-16!29;UBERON:0003528!4.28e-16!29;UBERON:0001893!4.28e-16!29;UBERON:0000153!3.84e-15!94;UBERON:0004111!5.13e-14!122;UBERON:0000025!1.51e-13!114;UBERON:0000956!9.65e-12!21;UBERON:0001869!9.65e-12!21;UBERON:0000203!9.65e-12!21;UBERON:0002619!7.13e-10!17;UBERON:0000468!3.82e-08!333;UBERON:0002021!4.37e-08!10;UBERON:0000411!4.37e-08!10;UBERON:0001950!4.37e-08!10;UBERON:0000477!2.97e-07!154;UBERON:0000483!6.04e-07!181|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.93e-31,73;UBERON:0002346,4.54e-31,64;UBERON:0003075,4.54e-31,64;UBERON:0007284,4.54e-31,64;UBERON:0001016,8.19e-30,75;UBERON:0004121,5.68e-29,95;UBERON:0000924,5.68e-29,95;UBERON:0006601,5.68e-29,95;UBERON:0000073,1.08e-28,54;UBERON:0010371,2.83e-27,73;UBERON:0001049,4.69e-27,52;UBERON:0005068,4.69e-27,52;UBERON:0006241,4.69e-27,52;UBERON:0007135,4.69e-27,52;UBERON:0010314,5.44e-25,92;UBERON:0000955,8.21e-24,47;UBERON:0006238,8.21e-24,47;UBERON:0003056,3.29e-23,49;UBERON:0002616,5.54e-23,46;UBERON:0002020,7.75e-22,34;UBERON:0003080,1.66e-20,40;UBERON:0002780,8.84e-20,39;UBERON:0001890,8.84e-20,39;UBERON:0006240,8.84e-20,39;UBERON:0003528,1.06e-18,29;UBERON:0002791,1.06e-18,29;UBERON:0001893,1.06e-18,29;UBERON:0000956,2.38e-13,21;UBERON:0001869,2.38e-13,21;UBERON:0000203,2.38e-13,21;UBERON:0002619,4.77e-11,17;UBERON:0004111,1.76e-10,122;UBERON:0000025,2.78e-10,114;UBERON:0002021,1.31e-09,10;UBERON:0000411,1.31e-09,10;UBERON:0001950,1.31e-09,10;UBERON:0003076,4.87e-07,12;UBERON:0003057,4.87e-07,12|phase1_expression=1.76163731815273,0,0.454999239389536,0,0,0,0,0.516493293766305,1.267098499365,1.17032263160997,1.02730780935303,1.27635454392538,0.856003649656029,0.524522414513984,0,0,0,0,0,0.42438965179803,8.58937230525805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0.523523743973798,0,0,0,2.01434908760924,1.31790010585369,0.917733760808408,0,2.18025156380447,1.5378032791413,2.52758868796568,0.839918529752175,0,0,0,0,0,0.286533439938757,0.515672092277442,3.64169629547276,2.64495489636016,3.80298842103708,0,0.889294796111139,0,0,0,0.599200221036809,0,3.00699875694585,2.70011876663381,2.73422449756797,5.42736870367227,4.19650227808066,2.08234358665422,3.73797336971122,0.919218786610021,14.3150645299205,26.8143409978894,23.8090126547177,4.87979264601717,4.94033275453012,2.6045668527838,18.4260779340911,18.5711661310454,21.2389564409766,5.30331453852602,5.55249555116501,3.16879057903011,0.454357159999104,0.755715601067855,1.44932244350839,0.860423876981386,0,1.07940638327563,0,0.448026887097336,0.842666520790511,0,0,0.70667914902068,5.35204995151386,5.13305909657271,2.54805239706646,0,0.216491041011214,0,0,0.79928715803342,0,1.03909497345377,0.520455980298408,1.21786191324856,0.230615497256059,0.753613202763113,0.940709657085638,1.25666591329675,0,2.31358971071859,0,0.647067399789637,0.441683036920787,0.969750506270444,0,19.3235326027621,25.5524982312415,0,0.11981512450592,0,0.127070227073065,16.6267609739353,34.7700458142156,5.78010019719176,37.5460531615317,47.3073596061111,24.7267773025876,26.9320496692478,0.916554274652847,0.746441823660558,0.252722758433675,2.31486041475121,1.56144531555244,1.60931473103431,1.44049703844279,1.20563854268572,1.76894897793452,1.7935920839879,2.06143794031403,6.46758426847539,0.431135985865684,1.51284864134255,1.75951124163949,1.31517439456545,0.834141747676794,0.348252166522167,0.411564272815887,0.59710280045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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:236915 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UTH8,uniprot:B1AXI4 | |||
|association_with_transcript=0bp_to_ENSMUST00000113876,ENSMUST00000113883,ENSMUST00000113885,uc009ttt.1_5end | |||
|cluster_id=chrX:92361682..92361765,- | |||
|description=CAGE_peak_2_at_Arhgef9_5end | |||
|id=chrX:92361682..92361765,- | |||
|ontology_enrichment_celltype=CL:0000540!5.48e-13!33;CL:0000047!5.48e-13!33;CL:0000031!5.48e-13!33;CL:0000404!5.48e-13!33;CL:0000117!1.98e-11!23;CL:0000337!1.98e-11!23;CL:0000393!3.51e-11!39;CL:0000211!3.51e-11!39;CL:0000221!2.01e-10!44;CL:0000133!2.01e-10!44;CL:0002319!5.83e-10!43;CL:0000055!7.99e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.42e-15,33;CL:0000047,5.42e-15,33;CL:0000031,5.42e-15,33;CL:0000404,5.42e-15,33;CL:0000117,5.24e-13,23;CL:0000337,5.24e-13,23;CL:0000393,1.87e-12,39;CL:0000211,1.87e-12,39;CL:0000221,9.99e-12,44;CL:0000133,9.99e-12,44;CL:0002319,3.60e-11,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.27e-26!73;UBERON:0005743!1.27e-26!73;UBERON:0000073!7.28e-26!75;UBERON:0001016!7.28e-26!75;UBERON:0000033!1.75e-25!63;UBERON:0002346!1.01e-24!71;UBERON:0003075!1.01e-24!71;UBERON:0007284!1.01e-24!71;UBERON:0004121!2.26e-24!102;UBERON:0000924!2.26e-24!102;UBERON:0006601!2.26e-24!102;UBERON:0001049!4.55e-23!52;UBERON:0005068!4.55e-23!52;UBERON:0006241!4.55e-23!52;UBERON:0007135!4.55e-23!52;UBERON:0000955!2.41e-22!50;UBERON:0006238!2.41e-22!50;UBERON:0002616!1.19e-21!49;UBERON:0003056!2.69e-20!49;UBERON:0002020!1.21e-18!34;UBERON:0003080!3.87e-18!40;UBERON:0002780!1.54e-17!39;UBERON:0001890!1.54e-17!39;UBERON:0006240!1.54e-17!39;UBERON:0007811!3.17e-16!86;UBERON:0002791!4.28e-16!29;UBERON:0003528!4.28e-16!29;UBERON:0001893!4.28e-16!29;UBERON:0000153!3.84e-15!94;UBERON:0004111!5.13e-14!122;UBERON:0000025!1.51e-13!114;UBERON:0000956!9.65e-12!21;UBERON:0001869!9.65e-12!21;UBERON:0000203!9.65e-12!21;UBERON:0002619!7.13e-10!17;UBERON:0000468!3.82e-08!333;UBERON:0002021!4.37e-08!10;UBERON:0000411!4.37e-08!10;UBERON:0001950!4.37e-08!10;UBERON:0000477!2.97e-07!154;UBERON:0000483!6.04e-07!181 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.93e-31,73;UBERON:0002346,4.54e-31,64;UBERON:0003075,4.54e-31,64;UBERON:0007284,4.54e-31,64;UBERON:0001016,8.19e-30,75;UBERON:0004121,5.68e-29,95;UBERON:0000924,5.68e-29,95;UBERON:0006601,5.68e-29,95;UBERON:0000073,1.08e-28,54;UBERON:0010371,2.83e-27,73;UBERON:0001049,4.69e-27,52;UBERON:0005068,4.69e-27,52;UBERON:0006241,4.69e-27,52;UBERON:0007135,4.69e-27,52;UBERON:0010314,5.44e-25,92;UBERON:0000955,8.21e-24,47;UBERON:0006238,8.21e-24,47;UBERON:0003056,3.29e-23,49;UBERON:0002616,5.54e-23,46;UBERON:0002020,7.75e-22,34;UBERON:0003080,1.66e-20,40;UBERON:0002780,8.84e-20,39;UBERON:0001890,8.84e-20,39;UBERON:0006240,8.84e-20,39;UBERON:0003528,1.06e-18,29;UBERON:0002791,1.06e-18,29;UBERON:0001893,1.06e-18,29;UBERON:0000956,2.38e-13,21;UBERON:0001869,2.38e-13,21;UBERON:0000203,2.38e-13,21;UBERON:0002619,4.77e-11,17;UBERON:0004111,1.76e-10,122;UBERON:0000025,2.78e-10,114;UBERON:0002021,1.31e-09,10;UBERON:0000411,1.31e-09,10;UBERON:0001950,1.31e-09,10;UBERON:0003076,4.87e-07,12;UBERON:0003057,4.87e-07,12 | |||
|phase1_expression=1.76163731815273,0,0.454999239389536,0,0,0,0,0.516493293766305,1.267098499365,1.17032263160997,1.02730780935303,1.27635454392538,0.856003649656029,0.524522414513984,0,0,0,0,0,0.42438965179803,8.58937230525805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0.523523743973798,0,0,0,2.01434908760924,1.31790010585369,0.917733760808408,0,2.18025156380447,1.5378032791413,2.52758868796568,0.839918529752175,0,0,0,0,0,0.286533439938757,0.515672092277442,3.64169629547276,2.64495489636016,3.80298842103708,0,0.889294796111139,0,0,0,0.599200221036809,0,3.00699875694585,2.70011876663381,2.73422449756797,5.42736870367227,4.19650227808066,2.08234358665422,3.73797336971122,0.919218786610021,14.3150645299205,26.8143409978894,23.8090126547177,4.87979264601717,4.94033275453012,2.6045668527838,18.4260779340911,18.5711661310454,21.2389564409766,5.30331453852602,5.55249555116501,3.16879057903011,0.454357159999104,0.755715601067855,1.44932244350839,0.860423876981386,0,1.07940638327563,0,0.448026887097336,0.842666520790511,0,0,0.70667914902068,5.35204995151386,5.13305909657271,2.54805239706646,0,0.216491041011214,0,0,0.79928715803342,0,1.03909497345377,0.520455980298408,1.21786191324856,0.230615497256059,0.753613202763113,0.940709657085638,1.25666591329675,0,2.31358971071859,0,0.647067399789637,0.441683036920787,0.969750506270444,0,19.3235326027621,25.5524982312415,0,0.11981512450592,0,0.127070227073065,16.6267609739353,34.7700458142156,5.78010019719176,37.5460531615317,47.3073596061111,24.7267773025876,26.9320496692478,0.916554274652847,0.746441823660558,0.252722758433675,2.31486041475121,1.56144531555244,1.60931473103431,1.44049703844279,1.20563854268572,1.76894897793452,1.7935920839879,2.06143794031403,6.46758426847539,0.431135985865684,1.51284864134255,1.75951124163949,1.31517439456545,0.834141747676794,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0.828503090142008,0.469052119962192,0.720248245844059,0.473489471170421,1.57411385397923,0.462801338662135,0.930135779001631,0.804820204198858,0.700592054203017,1.81015834904829,2.13417703302824,2.35099547682982,2.33919979880532,1.97595103761946,2.28150911892632,42.6888595585178,4.21908910755066,0,0,1.06644125267617,1.62565670302307,0.77320476793256,0.201683524623343,0.667134131534611,0.190225626112559,0,0.329397909448022,0,0,1.16978452271472,0,0.648414149624083,0.597423819763102,0.189667900953082,0.571242563048644,1.1270773567308,0.610953983535943,0.775809948670503,0.701358198903186,1.01178459398812,1.03327103585722,1.09899109488962,1.35736880313981,0.296452627087149,0,0.196558995113203,0.449724224769707,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0.486405680325106,1.64736847912849,4.31304619582064,3.34926852901653,0.624075346229121,1.01031551178845,0.717589654087649,0.482443521363367,0.369506380333209,0.568474235311454,1.14075483509418,0.509235257325564,0.234690248288502,1.00503754465089,0.952174563544055,0.390267295715598,1.10344600874334,0.8858587585951,0.637819074629948,0.163863314715738,0.863424909329478,0.289298117163023,0,0.54390568381871,0,0,14.6101036888891,11.8383803458125,1.47541450839008,1.26235463602186,1.26203287766503,1.95219372148319,2.58508077279359,1.91175038362042,1.11399337041197,1.13230612315533,1.21443210502468,1.75353514746787,3.95287777946523,30.2042037436499,0.567760340833074,0.534196811001766,0.651547837414304,0.659880491890142,0,0.728341908464944,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0.316036757935816,0,1.03135543248187,3.40439605753788,1.08036656418786,0.905510786479282,1.71469628025274,2.48276327099183,2.14042581122485,1.31639216481697,0.304464949114599,0,0,0.441056796109924,0.8244312647074,1.29171541356724,0.301564624640779,0.835606408021955,0.164140899745061,0.582961673259701,14.6485988588303,0,0.412773735926445,0,0,0,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0.949007980743406,1.21991680276109,0.972048067396211,0.627264888043406,0.655087691238533,0.269728692769641,1.65306911450672,1.57053565190418,0.388844919875379,0.621339313086926,0,0.299033092087958,1.15820943319968,1.94451188344048,0.774958940866387,0.337912250981556,0.821500670520278,0.781226309063701,0.734015410979976,0.241584120826006,0,0.316011120628178,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0,0.0762068066549998,0.201652370273681,0,0.192423683280659,0.116876902181569,2.0405734525369,0,0,0,1.9318959403219,0,0,0.857473516316263,0,39.5326289831947,38.2069946300957,37.2382083735608,26.980949627959,38.364621107156,45.323633843382,51.3017100176172,36.4760174611619,29.4542565839733,34.1721805756201,0.93408612825759,1.59609949360412,1.02440163452481,0.243106717068294,0.838452650511929,1.83843508450014,1.55572709461131,1.64828045791115,1.60459604795908,1.76888048234658,1.2673964994512,1.50901073108861,2.24739617927718,1.53660365771686,1.55075766180156,3.3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| |||
|short_description=p2@Arhgef9 | |||
}} |
Revision as of 10:59, 6 August 2015
Short description: | p2@Arhgef9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Arhgef9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000113876, ENSMUST00000113883, ENSMUST00000113885, uc009ttt.1_5end |
EntrezGene: | 236915 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.42e-15 | 33 |
neuronal stem cell | 5.42e-15 | 33 |
neuroblast | 5.42e-15 | 33 |
electrically signaling cell | 5.42e-15 | 33 |
CNS neuron (sensu Vertebrata) | 5.24e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.24e-13 | 23 |
electrically responsive cell | 1.87e-12 | 39 |
electrically active cell | 1.87e-12 | 39 |
ectodermal cell | 9.99e-12 | 44 |
neurectodermal cell | 9.99e-12 | 44 |
neural cell | 3.60e-11 | 43 |