Personal tools

FFCP PHASE1:Hg19::chr12:20848257..20848271,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:53919
|EntrezGene=53919
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:13819
|HGNC=13819
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:Q5JPA4,uniprot:B7Z3Q3,uniprot:Q9NYB5,uniprot:B7Z8P1
|UniProt=Q5JPA4,B7Z3Q3,Q9NYB5,B7Z8P1
|association_with_transcript=-17bp_to_ENST00000534996,ENST00000545604,NM_001145945,NM_001145946,uc001rej.3,uc009zip.2,uc010sii.1,uc010sij.1_5end
|association_with_transcript=-17bp_to_ENST00000534996,ENST00000545604,NM_001145945,NM_001145946,uc001rej.3,uc009zip.2,uc010sii.1,uc010sij.1_5end
|cluster_id=chr12:20848257..20848271,+
|cluster_id=chr12:20848257..20848271,+

Latest revision as of 19:04, 17 September 2015

Short description:p7@SLCO1C1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_SLCO1C1_5end
Coexpression cluster:C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung
Association with transcript: -17bp_to_ENST00000534996, ENST00000545604, NM_001145945, NM_001145946, uc001rej.3, uc009zip.2, uc010sii.1, uc010sij.1_5end
EntrezGene:SLCO1C1
HGNC: 13819
UniProt: Q5JPA4B7Z3Q3Q9NYB5B7Z8P1
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20
25




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data