Personal tools

FFCP PHASE1:Mm9::chr11:62389399..62389435,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:62389399..62389435,+
|short_description=p3@Trpv2
|description=CAGE_peak_3_at_Trpv2_5end
|association_with_transcript=-40bp_to_uc007jjj.1,uc011xwb.1_5end
|EntrezGene=22368
|EntrezGene=22368
|HGNC=
|HGNC=
|UniProt=
|UniProt=
|association_with_transcript=-40bp_to_uc007jjj.1,uc011xwb.1_5end
|description=CAGE_peak_3_at_Trpv2_5end
|id=chr11:62389399..62389435,+
|ontology_enrichment_disease=
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0.233612640595526,3.35720640948098,0.84473233291,1.63845168425395,0.34243593645101,0.159544317990673,3.59521532855532,2.01066925563694,11.3257319017325,13.1608923803387,10.4934281719222,15.7731082679119,13.3001000597567,12.7316895539409,1.7008658030214,7.84398514486994,9.14199261986274,2.07990149631429,2.2940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,2.54012269383853,2.46025915033828,0,0,0,0,23.0192396905299,19.533383613095,23.5585684788209,34.1174263057988,28.6879103682547,19.4204141212461,0.377690453926732,0.709638518536602,0.183546752161682,14.0830441982647,0,0.878744730937887,1.74986909166855,5.31948402176378,0,10.9058693937529,2.90144856804538,4.36921938885203,1.80081605225163,6.5902691185914,2.57836046138721,2.02316460859598,0.528990979272033,2.53532561402472,6.43804610931351,0.889294796111139,64.7927796442607,88.0091062684607,77.4423325291249,19.7736072942147,6.53171119046643,0.311068836925433,0.675029691658453,0.210324961351382,0.856952953211411,2.65042249141936,0.489963196859816,0.287536413054709,0,1.10115880999389,2.29837208553338,2.76491759861238,2.2420668914133,2.47016637726506,1.56274011167028,0.837548997004143,1.68828783009504,3.66715794664344,2.94628585473668,3.41692033917847,1.86399445825301,3.25622631332691,6.72586884950391,1.44932244350839,1.72084775396277,0,0,0,0,1.12355536105401,4.4311883870295,3.63700406444016,3.88673531961374,0,0,0,0,0,0,0.505524445014783,1.59857431606684,10.3575153458869,3.26572705942614,1.56136794089522,2.13125834818499,0.922461989024234,3.01445281105245,1.29347577849275,1.38233250462643,3.95511948374998,2.60278842455841,13.2691582792481,3.88240439873782,5.52103796150984,8.24287930329878,1.86391761218122,2.92780797011547,1.8850203613211,1.02182822083437,2.39630249011841,2.39961092397363,4.3203877204842,2.54644086988199,3.20250421973039,0.628271760564322,4.17178368461463,3.58001640262463,3.53239675751252,2.59586020908412,1.2220723662038,6.09594155989456,0.252722758433675,1.47309299120532,0.260240885925407,2.29902104433473,0.900310649026746,1.05493372485001,0.748401490664606,0.896796041993948,0.937017245597288,1.03481348295606,0.431135985865684,0.378212160335639,0.175951124163949,1.97276159184817,1.11218899690239,2.089512999133,1.64625709126355,0,3.51106593656617,2.83082697826187,3.9782889915383,1.44988040774851,0.703578179943289,0.900310307305074,0.710234206755631,1.57411385397923,0.617068451549513,0.930135779001631,2.14618721119695,0.817357396570186,0.658239399653922,1.31333971263276,1.70244500046297,1.16959989940266,1.97595103761946,1.74468344388483,2.94405927989778,1.13195073617213,0.660837565967596,0.264450566663544,0.213288250535234,1.39342003116263,0.77320476793256,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.658795818896044,1.25667604400135,1.98956472041151,0.974820435595601,0.898819408654221,1.29682829924817,0.796565093017469,0.758671603812327,0.913988100877831,0,0.610953983535943,0.193952487167626,0.420814919341911,0.442655759869801,0.295220295959204,0.470996183524124,0.616985819609003,0.296452627087149,2.33583148002532,4.52085688760367,2.9232074610031,2.84004169943904,2.65294875727659,3.31013607315846,2.01387296215567,2.10775794807546,1.92192989231657,0,2.60498663367952,1.24815069245824,1.51547326768267,0.717589654087649,0.964887042726734,6.28160846566456,1.13694847062291,0.488894929326078,0.509235257325564,0.469380496577004,1.17254380209271,2.14239276797412,3.31727201358258,2.52216230569906,3.32197034473162,2.39182152986231,4.7520361267564,6.73471429276993,4.48412081602686,73.8877291302434,48.9515115436839,1.47529281905711,1.37968373152366,3.21101179975584,1.99259867206745,0,1.51482556322624,1.26203287766503,0,1.29254038639679,0.477937595905104,1.55959071857676,0.849229592366497,1.21443210502468,0.584511715822624,1.18586333383957,0.963963949265421,1.56134093729095,1.06839362200353,0.162886959353576,3.13443233647817,1.32745138339963,0.485561272309963,0,0.377210159511796,1.18120757152309,0.922305443831782,0.775284879504663,0.363533729477506,0.356497378384721,0.948110273807448,2.10837217149998,0,0.340439605753788,0.18006109403131,1.03486947026204,0.643011105094777,0.532020700926821,0.535106452806212,0.164549020602121,2.13125464380219,32.1500240047283,23.3015277950202,1.98475558249466,1.97863503529776,3.22928853391811,2.95533332147964,1.55184047204077,0.820704498725306,0.582961673259701,2.03967832211561,11.4483490134561,4.12773735926445,5.92622487583077,7.53473828018764,12.1657862671712,8.69357058184786,0.849892149969277,0.69975726161829,0.967399816630967,0.954670618015114,0,1.01659733563424,0.972048067396211,1.46361807210128,0.87345025498471,1.75323650300267,1.81837602595739,2.09404753587224,1.42576470620972,0.621339313086926,0,0.149516546043979,0.165458490457098,0.583353565032143,0.645799117388655,0.675824501963113,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,3.16011120628178,0.810900861160657,1.33524244314275,1.16928740680016,1.07416017400489,2.58285761215644,0.721172697119813,0.590758108698309,1.31256384932592,0.533447646584999,0.907435666231565,1.26695244961678,0.865906574762965,1.28564592399726,0.906921534460845,5.32766288097755,4.30626511725483,10.744615447301,5.40930863290133,4.69206188627955,1.28206136987086,1.50057865355346,1.00314420807073,1.6942555278512,2.30162618253588,1.14579102687879,2.57779773515531,5.48066015816514,3.0215755895588,2.02506750069542,5.40385443869065,2.26571204492102,2.07104124700728,0.31136204275253,1.59609949360412,1.36586884603307,1.21553358534147,0.838452650511929,2.20612210140017,1.77797382241292,2.06035057238894,2.24643446714271,1.51618327058278,2.5347929989024,2.45214243801899,1.591905626988,1.40855335290712,2.81433797882505,2.38146845641537,1.50649623728312,2.12200142510076,2.06042950401653,2.50238164228475,2.74295401908332,1.77475806159337,0.715308569841963,1.30811774969096,1.50575008664529,1.69229215783353,2.0122077016005,2.63069711437843,2.30866993537965,1.68342681497322,1.77952527186261,1.97008964751127,1.22769312950907,1.54936841185966,1.73615949883027,2.24829520144151,2.57324769289949,2.57845264857958,2.10417165275728,2.42650561031467,2.55054619182464
|phase1_expression=0.320297694209588,0,0.454999239389536,0,0,0,0.233612640595526,3.35720640948098,0.84473233291,1.63845168425395,0.34243593645101,0.159544317990673,3.59521532855532,2.01066925563694,11.3257319017325,13.1608923803387,10.4934281719222,15.7731082679119,13.3001000597567,12.7316895539409,1.7008658030214,7.84398514486994,9.14199261986274,2.07990149631429,2.2940928106717,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0,2.54012269383853,2.46025915033828,0,0,0,0,23.0192396905299,19.533383613095,23.5585684788209,34.1174263057988,28.6879103682547,19.4204141212461,0.377690453926732,0.709638518536602,0.183546752161682,14.0830441982647,0,0.878744730937887,1.74986909166855,5.31948402176378,0,10.9058693937529,2.90144856804538,4.36921938885203,1.80081605225163,6.5902691185914,2.57836046138721,2.02316460859598,0.528990979272033,2.53532561402472,6.43804610931351,0.889294796111139,64.7927796442607,88.0091062684607,77.4423325291249,19.7736072942147,6.53171119046643,0.311068836925433,0.675029691658453,0.210324961351382,0.856952953211411,2.65042249141936,0.489963196859816,0.287536413054709,0,1.10115880999389,2.29837208553338,2.76491759861238,2.2420668914133,2.47016637726506,1.56274011167028,0.837548997004143,1.68828783009504,3.66715794664344,2.94628585473668,3.41692033917847,1.86399445825301,3.25622631332691,6.72586884950391,1.44932244350839,1.72084775396277,0,0,0,0,1.12355536105401,4.4311883870295,3.63700406444016,3.88673531961374,0,0,0,0,0,0,0.505524445014783,1.59857431606684,10.3575153458869,3.26572705942614,1.56136794089522,2.13125834818499,0.922461989024234,3.01445281105245,1.29347577849275,1.38233250462643,3.95511948374998,2.60278842455841,13.2691582792481,3.88240439873782,5.52103796150984,8.24287930329878,1.86391761218122,2.92780797011547,1.8850203613211,1.02182822083437,2.39630249011841,2.39961092397363,4.3203877204842,2.54644086988199,3.20250421973039,0.628271760564322,4.17178368461463,3.58001640262463,3.53239675751252,2.59586020908412,1.2220723662038,6.09594155989456,0.252722758433675,1.47309299120532,0.260240885925407,2.29902104433473,0.900310649026746,1.05493372485001,0.748401490664606,0.896796041993948,0.937017245597288,1.03481348295606,0.431135985865684,0.378212160335639,0.175951124163949,1.97276159184817,1.11218899690239,2.089512999133,1.64625709126355,0,3.51106593656617,2.83082697826187,3.9782889915383,1.44988040774851,0.703578179943289,0.900310307305074,0.710234206755631,1.57411385397923,0.617068451549513,0.930135779001631,2.14618721119695,0.817357396570186,0.658239399653922,1.31333971263276,1.70244500046297,1.16959989940266,1.97595103761946,1.74468344388483,2.94405927989778,1.13195073617213,0.660837565967596,0.264450566663544,0.213288250535234,1.39342003116263,0.77320476793256,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.658795818896044,1.25667604400135,1.98956472041151,0.974820435595601,0.898819408654221,1.29682829924817,0.796565093017469,0.758671603812327,0.913988100877831,0,0.610953983535943,0.193952487167626,0.420814919341911,0.442655759869801,0.295220295959204,0.470996183524124,0.616985819609003,0.296452627087149,2.33583148002532,4.52085688760367,2.9232074610031,2.84004169943904,2.65294875727659,3.31013607315846,2.01387296215567,2.10775794807546,1.92192989231657,0,2.60498663367952,1.24815069245824,1.51547326768267,0.717589654087649,0.964887042726734,6.28160846566456,1.13694847062291,0.488894929326078,0.509235257325564,0.469380496577004,1.17254380209271,2.14239276797412,3.31727201358258,2.52216230569906,3.32197034473162,2.39182152986231,4.7520361267564,6.73471429276993,4.48412081602686,73.8877291302434,48.9515115436839,1.47529281905711,1.37968373152366,3.21101179975584,1.99259867206745,0,1.51482556322624,1.26203287766503,0,1.29254038639679,0.477937595905104,1.55959071857676,0.849229592366497,1.21443210502468,0.584511715822624,1.18586333383957,0.963963949265421,1.56134093729095,1.06839362200353,0.162886959353576,3.13443233647817,1.32745138339963,0.485561272309963,0,0.377210159511796,1.18120757152309,0.922305443831782,0.775284879504663,0.363533729477506,0.356497378384721,0.948110273807448,2.10837217149998,0,0.340439605753788,0.18006109403131,1.03486947026204,0.643011105094777,0.532020700926821,0.535106452806212,0.164549020602121,2.13125464380219,32.1500240047283,23.3015277950202,1.98475558249466,1.97863503529776,3.22928853391811,2.95533332147964,1.55184047204077,0.820704498725306,0.582961673259701,2.03967832211561,11.4483490134561,4.12773735926445,5.92622487583077,7.53473828018764,12.1657862671712,8.69357058184786,0.849892149969277,0.69975726161829,0.967399816630967,0.954670618015114,0,1.01659733563424,0.972048067396211,1.46361807210128,0.87345025498471,1.75323650300267,1.81837602595739,2.09404753587224,1.42576470620972,0.621339313086926,0,0.149516546043979,0.165458490457098,0.583353565032143,0.645799117388655,0.675824501963113,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,3.16011120628178,0.810900861160657,1.33524244314275,1.16928740680016,1.07416017400489,2.58285761215644,0.721172697119813,0.590758108698309,1.31256384932592,0.533447646584999,0.907435666231565,1.26695244961678,0.865906574762965,1.28564592399726,0.906921534460845,5.32766288097755,4.30626511725483,10.744615447301,5.40930863290133,4.69206188627955,1.28206136987086,1.50057865355346,1.00314420807073,1.6942555278512,2.30162618253588,1.14579102687879,2.57779773515531,5.48066015816514,3.0215755895588,2.02506750069542,5.40385443869065,2.26571204492102,2.07104124700728,0.31136204275253,1.59609949360412,1.36586884603307,1.21553358534147,0.838452650511929,2.20612210140017,1.77797382241292,2.06035057238894,2.24643446714271,1.51618327058278,2.5347929989024,2.45214243801899,1.591905626988,1.40855335290712,2.81433797882505,2.38146845641537,1.50649623728312,2.12200142510076,2.06042950401653,2.50238164228475,2.74295401908332,1.77475806159337,0.715308569841963,1.30811774969096,1.50575008664529,1.69229215783353,2.0122077016005,2.63069711437843,2.30866993537965,1.68342681497322,1.77952527186261,1.97008964751127,1.22769312950907,1.54936841185966,1.73615949883027,2.24829520144151,2.57324769289949,2.57845264857958,2.10417165275728,2.42650561031467,2.55054619182464
|short_description=p3@Trpv2
}}
}}

Revision as of 17:15, 17 April 2012

Short description:p3@Trpv2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Trpv2_5end
Coexpression cluster:NA
Association with transcript: -40bp_to_uc007jjj.1, uc011xwb.1_5end
EntrezGene:Trpv2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Trpv2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.60
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.01
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A313.16
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A215.77
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.30
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A612.73
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I99.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G823.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H119.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H323.56
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G934.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H419.42
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B714.08
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.32
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.91
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.37
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.44
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C764.79
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E788.01
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D277.44
Mouse Microglia, donor1.CNhs12629.11718-123C819.77
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.30
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D93.26
Mouse Schwann, donor2.CNhs12573.11746-123F96.73
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.89
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.60
accessory axillary lymph node, adult.CNhs10475.1063-29H910.36
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F53.01
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G213.27
bone (os femoris), neonate N02.CNhs11227.1985-43F53.88
bone (os femoris), neonate N16.CNhs11225.1525-43A65.52
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.32
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F23.58
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.10
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.26
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H64.52
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A33.31
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.72
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.52
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A44.75
lung, neonate N25.CNhs11119.1359-25C76.73
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A173.89
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A148.95
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I732.15
placenta, adult pregnant day17.CNhs10464.577-18G323.30
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C31.98
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H32.96
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G211.45
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F25.93
spleen, neonate N10.CNhs11116.752-24D17.53
spleen, neonate N20.CNhs11112.824-19H112.17
spleen, neonate N25.CNhs11099.1354-25G38.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.85
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A91.82
stomach, neonate N25.CNhs11104.1355-25E42.09
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G510.74
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:62389399..62389435,%2B&oldid=743177"