Personal tools

FFCP PHASE1:Mm9::chr11:69805135..69805140,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr11:69805135..69805140,+
|short_description=p5@Gabarap
|description=CAGE_peak_5_at_Gabarap_5end
|association_with_transcript=0bp_to_ENSMUST00000108592_5end
|EntrezGene=56486
|EntrezGene=56486
|HGNC=
|HGNC=
|UniProt=B1AR50
|UniProt=B1AR50
|association_with_transcript=0bp_to_ENSMUST00000108592_5end
|description=CAGE_peak_5_at_Gabarap_5end
|id=chr11:69805135..69805140,+
|ontology_enrichment_disease=
|phase1_expression=4.64431656603902,9.77131141390211,6.82498859084304,5.44435580352294,2.00358291978539,5.54001597309236,5.60670337429262,4.64843964389675,1.97104211012333,2.57470978954193,1.02730780935303,1.27635454392538,3.93761678841773,2.97229368224591,1.66554880907831,5.06188168474565,3.49780939064073,10.4102514568218,6.7186072466812,6.36584477697045,14.4573593256819,4.76596565764249,3.91799683708403,7.83962871687693,6.42345986988076,11.4846392823004,8.18447792702242,5.60225204983311,7.03086651988583,4.78857246543868,7.98229838359097,0,1.23012957516914,0,3.17736781726402,2.49351968037739,2.04169356262369,28.0416192593728,23.440060335714,12.0410461113974,11.7646297606203,19.1252735788365,13.5942898848723,7.05022180663233,10.7459547092685,8.62669735159903,18.7773922643529,11.1192829754028,10.3252505885202,8.55491555926847,9.65906309215001,14.3752564364972,5.87239121202077,2.90144856804538,3.6970317905671,6.43148590089868,6.5902691185914,7.21940929188419,9.3065571995415,5.28990979272033,5.70448263155561,13.5537812827653,9.78224275722253,18.8978940629094,21.7550599764734,21.314403448383,11.9840044207362,11.5265491596466,9.95420278161385,9.04539786822327,9.25429829946081,9.71213346972932,6.40518768759679,9.30930074033651,11.7889929352431,9.19218786610021,2.20231761998777,4.21368215681119,4.30098293117482,6.59431438650969,9.97215315266265,10.4182674111352,6.97957497503452,2.25105044012672,4.5839474333043,2.94628585473668,6.69146899755784,7.26957838718672,8.17842887998388,8.46401473195998,8.98579914975201,6.88339101585109,4.0798280022465,3.2382191498269,3.89865850468601,3.13618820968135,6.17955448579708,5.45377032249785,11.4305842025262,5.65343319216544,6.05626705039726,7.69958864485907,12.7402619853323,0,2.59789249213457,2.78695852022608,1.01104889002957,7.30776830201984,3.88406825470758,7.86743337043571,6.93941307064543,4.26251669636998,4.38169444786511,6.78251882486802,5.64425794251383,5.6549966098354,7.66304399976559,6.65157041831594,5.30766331169925,5.17653919831709,4.19598885074748,5.33362778448744,1.86391761218122,1.75668478206928,2.72280718857492,5.62005521458901,3.71426885968353,2.99951365496704,3.55796635804581,4.34392854273986,3.20250421973039,9.29842205635197,3.47648640384553,1.79000820131231,6.02585329222724,3.24482526135515,6.11036183101898,5.10068579501381,9.85618757891331,6.94458124425364,5.07469727554544,5.28774840196988,3.78130472591233,4.52114453507145,2.85753296435577,3.33095672740609,4.02917415606834,2.32833033665114,3.88022387279116,3.40390944302075,2.81521798662318,8.32943783224784,5.28289773528636,4.52727816478817,5.14455341019859,3.38358253591438,2.80885274925294,4.37491442095016,3.6941254921427,6.42089894860056,4.69052119962192,5.76198596675248,6.8655973319711,6.09969118416952,5.55361606394562,5.11574678450897,3.21928081679543,4.55384835231961,3.94943639792353,5.41752631461014,5.6748166682099,3.65499968563331,8.12335426576887,5.50246316917524,4.6263788684108,6.99751364179134,6.27795687669216,5.55346189993443,4.05247676016945,2.78684006232526,4.76809606891745,5.24377164020691,3.33567065767305,6.46767128782701,4.74529061544512,5.76446341534038,6.03204501120647,6.96347652144028,6.62877896205008,5.39291645192533,3.6743468478698,2.78797782556114,6.06937283049861,3.99869794134051,2.25415471346161,4.2766778847516,4.07300223052014,4.9095073923223,5.6280518040589,4.57591458736767,4.23896565171712,4.93588655687202,4.74324203339438,3.67059232575407,3.93117990226406,3.59779379815766,3.85434230638156,3.37648023653384,5.85639459097266,3.45235364940973,4.05338066937588,6.04035109013779,12.9391385874619,3.34926852901653,4.99260276983297,1.76805214562978,4.30553792452589,2.8946611281802,4.80358294433172,4.9267767060326,4.07412441105065,4.41337223015489,5.86725620721255,6.365237782789,6.9032655856944,5.85400943573396,6.14777062014145,5.3151525515706,4.46473352240964,4.58817281204066,6.04397436530635,4.48412081602686,4.52373851817817,6.52686820582452,3.93411418415229,4.13905119457099,5.61927064957272,4.57125577709592,7.54100748732707,3.53459298086122,4.41711507182759,4.29482618726302,4.09304455692318,4.77937595905104,4.90157082981267,7.07691326972081,4.04810701674894,5.26060544240361,3.95287777946523,4.4984984299053,6.24536374916382,7.83488656135923,4.39794790254655,3.46437258242324,6.63725691699814,2.91336763385978,4.83717691143602,6.03536255218874,8.26845300066164,5.84126781093462,6.20227903603731,4.36240475373007,4.9909632973861,6.0046984007805,6.32511651449993,6.18813259489121,5.7874732978144,4.86164953884538,7.50280365939976,5.35842587578981,5.67488747655275,6.77801506887868,7.24015690649332,12.4830629136986,3.28540391289194,4.66030555900404,5.95426674748397,3.62749756471256,4.52100394748536,3.98065304525829,3.9392873521035,3.28281799490123,7.57850175237612,5.19190845629427,5.29699730473343,4.54051109519089,4.25947412950337,3.39063222608444,3.96413260390973,4.80434163733698,4.07948231985253,3.35883485576779,2.48759952847963,7.63736494412091,6.32671987162271,3.25311147402958,3.99619761040665,4.80903080833278,5.67742665740062,6.74321731924104,4.29797969771747,4.4498510137285,4.40690909192096,8.07741107013003,74.9711608449973,6.72824457197905,4.63283773279873,5.44463327363333,6.32883135040882,6.9272011451219,4.69428954583016,4.4269490846943,3.35549902162275,13.5287107662563,29.6670906445601,5.05617793005085,5.27085559754427,4.72470402958205,3.89762468933385,2.50637373934474,2.98022032171897,3.24527713703916,3.2491695978407,3.12995994839258,3.12447907285499,3.2264379243789,3.11865218367208,3.07877893249054,3.15567635890236,3.62768613784338,1.33191572024439,1.61484941897056,1.67884616364078,6.37525660306228,10.5102186252662,5.67770035228522,4.93047271881851,7.02200945649509,2.82375921308533,4.60325236507177,2.86447756719698,3.78077001156113,2.74033007908257,3.7769694869485,2.02506750069542,2.2516060161211,2.71885445390523,5.1776031175182,6.12345350746642,4.38927360741134,5.63420898988643,5.34834777550247,4.40187641518763,5.1476182366004,5.55616819504038,3.91466608753899,5.13470735346904,4.29585259998456,4.56262739802432,4.52703219326583,4.775716880964,4.8018864303652,4.53740204749345,4.76293691283074,3.82418275618023,4.05109362973781,4.12085900803307,3.38557516309114,2.40008476669791,3.72699192934609,3.33810665926249,3.19762116591123,4.04670335785922,4.14611578669215,4.20734337607377,4.47218509444333,4.07412341537585,8.97827634652382,3.91495559809775,5.02372860115374,1.22769312950907,3.87342102964915,3.66522560864169,5.74564329257276,5.14649538579898,4.29742108096597,5.35607329792761,7.0589254118245,3.47801753430632
|phase1_expression=4.64431656603902,9.77131141390211,6.82498859084304,5.44435580352294,2.00358291978539,5.54001597309236,5.60670337429262,4.64843964389675,1.97104211012333,2.57470978954193,1.02730780935303,1.27635454392538,3.93761678841773,2.97229368224591,1.66554880907831,5.06188168474565,3.49780939064073,10.4102514568218,6.7186072466812,6.36584477697045,14.4573593256819,4.76596565764249,3.91799683708403,7.83962871687693,6.42345986988076,11.4846392823004,8.18447792702242,5.60225204983311,7.03086651988583,4.78857246543868,7.98229838359097,0,1.23012957516914,0,3.17736781726402,2.49351968037739,2.04169356262369,28.0416192593728,23.440060335714,12.0410461113974,11.7646297606203,19.1252735788365,13.5942898848723,7.05022180663233,10.7459547092685,8.62669735159903,18.7773922643529,11.1192829754028,10.3252505885202,8.55491555926847,9.65906309215001,14.3752564364972,5.87239121202077,2.90144856804538,3.6970317905671,6.43148590089868,6.5902691185914,7.21940929188419,9.3065571995415,5.28990979272033,5.70448263155561,13.5537812827653,9.78224275722253,18.8978940629094,21.7550599764734,21.314403448383,11.9840044207362,11.5265491596466,9.95420278161385,9.04539786822327,9.25429829946081,9.71213346972932,6.40518768759679,9.30930074033651,11.7889929352431,9.19218786610021,2.20231761998777,4.21368215681119,4.30098293117482,6.59431438650969,9.97215315266265,10.4182674111352,6.97957497503452,2.25105044012672,4.5839474333043,2.94628585473668,6.69146899755784,7.26957838718672,8.17842887998388,8.46401473195998,8.98579914975201,6.88339101585109,4.0798280022465,3.2382191498269,3.89865850468601,3.13618820968135,6.17955448579708,5.45377032249785,11.4305842025262,5.65343319216544,6.05626705039726,7.69958864485907,12.7402619853323,0,2.59789249213457,2.78695852022608,1.01104889002957,7.30776830201984,3.88406825470758,7.86743337043571,6.93941307064543,4.26251669636998,4.38169444786511,6.78251882486802,5.64425794251383,5.6549966098354,7.66304399976559,6.65157041831594,5.30766331169925,5.17653919831709,4.19598885074748,5.33362778448744,1.86391761218122,1.75668478206928,2.72280718857492,5.62005521458901,3.71426885968353,2.99951365496704,3.55796635804581,4.34392854273986,3.20250421973039,9.29842205635197,3.47648640384553,1.79000820131231,6.02585329222724,3.24482526135515,6.11036183101898,5.10068579501381,9.85618757891331,6.94458124425364,5.07469727554544,5.28774840196988,3.78130472591233,4.52114453507145,2.85753296435577,3.33095672740609,4.02917415606834,2.32833033665114,3.88022387279116,3.40390944302075,2.81521798662318,8.32943783224784,5.28289773528636,4.52727816478817,5.14455341019859,3.38358253591438,2.80885274925294,4.37491442095016,3.6941254921427,6.42089894860056,4.69052119962192,5.76198596675248,6.8655973319711,6.09969118416952,5.55361606394562,5.11574678450897,3.21928081679543,4.55384835231961,3.94943639792353,5.41752631461014,5.6748166682099,3.65499968563331,8.12335426576887,5.50246316917524,4.6263788684108,6.99751364179134,6.27795687669216,5.55346189993443,4.05247676016945,2.78684006232526,4.76809606891745,5.24377164020691,3.33567065767305,6.46767128782701,4.74529061544512,5.76446341534038,6.03204501120647,6.96347652144028,6.62877896205008,5.39291645192533,3.6743468478698,2.78797782556114,6.06937283049861,3.99869794134051,2.25415471346161,4.2766778847516,4.07300223052014,4.9095073923223,5.6280518040589,4.57591458736767,4.23896565171712,4.93588655687202,4.74324203339438,3.67059232575407,3.93117990226406,3.59779379815766,3.85434230638156,3.37648023653384,5.85639459097266,3.45235364940973,4.05338066937588,6.04035109013779,12.9391385874619,3.34926852901653,4.99260276983297,1.76805214562978,4.30553792452589,2.8946611281802,4.80358294433172,4.9267767060326,4.07412441105065,4.41337223015489,5.86725620721255,6.365237782789,6.9032655856944,5.85400943573396,6.14777062014145,5.3151525515706,4.46473352240964,4.58817281204066,6.04397436530635,4.48412081602686,4.52373851817817,6.52686820582452,3.93411418415229,4.13905119457099,5.61927064957272,4.57125577709592,7.54100748732707,3.53459298086122,4.41711507182759,4.29482618726302,4.09304455692318,4.77937595905104,4.90157082981267,7.07691326972081,4.04810701674894,5.26060544240361,3.95287777946523,4.4984984299053,6.24536374916382,7.83488656135923,4.39794790254655,3.46437258242324,6.63725691699814,2.91336763385978,4.83717691143602,6.03536255218874,8.26845300066164,5.84126781093462,6.20227903603731,4.36240475373007,4.9909632973861,6.0046984007805,6.32511651449993,6.18813259489121,5.7874732978144,4.86164953884538,7.50280365939976,5.35842587578981,5.67488747655275,6.77801506887868,7.24015690649332,12.4830629136986,3.28540391289194,4.66030555900404,5.95426674748397,3.62749756471256,4.52100394748536,3.98065304525829,3.9392873521035,3.28281799490123,7.57850175237612,5.19190845629427,5.29699730473343,4.54051109519089,4.25947412950337,3.39063222608444,3.96413260390973,4.80434163733698,4.07948231985253,3.35883485576779,2.48759952847963,7.63736494412091,6.32671987162271,3.25311147402958,3.99619761040665,4.80903080833278,5.67742665740062,6.74321731924104,4.29797969771747,4.4498510137285,4.40690909192096,8.07741107013003,74.9711608449973,6.72824457197905,4.63283773279873,5.44463327363333,6.32883135040882,6.9272011451219,4.69428954583016,4.4269490846943,3.35549902162275,13.5287107662563,29.6670906445601,5.05617793005085,5.27085559754427,4.72470402958205,3.89762468933385,2.50637373934474,2.98022032171897,3.24527713703916,3.2491695978407,3.12995994839258,3.12447907285499,3.2264379243789,3.11865218367208,3.07877893249054,3.15567635890236,3.62768613784338,1.33191572024439,1.61484941897056,1.67884616364078,6.37525660306228,10.5102186252662,5.67770035228522,4.93047271881851,7.02200945649509,2.82375921308533,4.60325236507177,2.86447756719698,3.78077001156113,2.74033007908257,3.7769694869485,2.02506750069542,2.2516060161211,2.71885445390523,5.1776031175182,6.12345350746642,4.38927360741134,5.63420898988643,5.34834777550247,4.40187641518763,5.1476182366004,5.55616819504038,3.91466608753899,5.13470735346904,4.29585259998456,4.56262739802432,4.52703219326583,4.775716880964,4.8018864303652,4.53740204749345,4.76293691283074,3.82418275618023,4.05109362973781,4.12085900803307,3.38557516309114,2.40008476669791,3.72699192934609,3.33810665926249,3.19762116591123,4.04670335785922,4.14611578669215,4.20734337607377,4.47218509444333,4.07412341537585,8.97827634652382,3.91495559809775,5.02372860115374,1.22769312950907,3.87342102964915,3.66522560864169,5.74564329257276,5.14649538579898,4.29742108096597,5.35607329792761,7.0589254118245,3.47801753430632
|short_description=p5@Gabarap
}}
}}

Revision as of 17:27, 17 April 2012

Short description:p5@Gabarap
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Gabarap_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000108592_5end
EntrezGene:Gabarap
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Gabarap

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.82
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.54
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I85.61
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.57
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.28
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.97
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.06
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.72
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H24.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I93.92
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.42
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I18.18
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B97.03
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.04
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H123.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H312.04
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G911.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H413.59
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D910.75
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.63
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C211.12
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.33
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C38.55
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C414.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.90
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C16.43
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.22
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.55
Mouse Meningeal cells, donor3.CNhs12109.11639-122D19.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C718.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D221.31
Mouse Microglia, donor1.CNhs12629.11718-123C811.98
Mouse Microglia, donor2.CNhs12634.11736-123E811.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.05
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.58
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D98.18
Mouse Schwann, donor2.CNhs12573.11746-123F98.46
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G38.99
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.18
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I75.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E311.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.65
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G66.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.31
accessory axillary lymph node, adult.CNhs10475.1063-29H93.88
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C56.94
adrenal gland, embryo E16.CNhs11004.1254-43D64.26
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F56.78
adrenal gland, neonate N00.CNhs11191.1311-23C15.64
adrenal gland, neonate N25.CNhs11223.1377-27I35.65
amnion, adult pregnant day17.5.CNhs10488.583-22A87.66
aorta, adult.CNhs10498.46-23H16.65
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F55.18
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.72
colon, adult.CNhs10468.36-18H75.62
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.71
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F19.30
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B23.24
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.11
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.10
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C65.07
eyeball, embryo E14.CNhs10521.399-16E25.29
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E23.88
forelimb, embryo E12.CNhs10600.359-14H23.40
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A88.33
forelimb, embryo E15.CNhs11007.437-20E75.28
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B55.14
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F54.69
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D46.87
heart, embryo E15.CNhs11017.431-16C86.10
heart, embryo E16.CNhs11021.457-17C65.55
heart, embryo E17.CNhs11025.479-18E55.12
heart, embryo E18.CNhs11030.1283-20G33.22
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I23.95
heart, neonate N10.CNhs11118.749-24G15.42
heart, neonate N16.CNhs11209.782-15G15.67
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D38.12
heart, neonate N30.CNhs11202.1390-42D25.50
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G17.00
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I54.05
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D84.77
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F76.47
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E95.76
intestine, neonate N06.CNhs11102.688-20B86.03
intestine, neonate N07.CNhs11095.720-20F26.96
intestine, neonate N10.CNhs11098.755-23A56.63
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I96.07
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C74.07
kidney, neonate N00.CNhs11214.646-21G74.91
kidney, neonate N10.CNhs11206.758-6D55.63
kidney, neonate N20.CNhs11113.832-19I14.58
kidney, neonate N25.CNhs11122.1353-25F34.24
kidney, neonate N30.CNhs11203.1385-42H14.94
liver, adult pregnant day01.CNhs10466.508-5B24.74
liver, embryo E12.CNhs10601.355-15F83.67
liver, embryo E13.CNhs10524.378-3H63.93
liver, embryo E14.CNhs10594.409-16E13.60
liver, embryo E15.CNhs10520.433-16D73.85
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A35.86
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H14.31
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F84.07
lung, embryo E15.CNhs11020.432-17C54.41
lung, embryo E16.CNhs10998.458-17B65.87
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I66.90
lung, neonate N00.CNhs11224.640-42C65.85
lung, neonate N06.CNhs11212.683-20E56.15
lung, neonate N07.CNhs11111.715-19A35.32
lung, neonate N10.CNhs11219.750-23E64.46
lung, neonate N20.CNhs11109.822-18A44.59
lung, neonate N25.CNhs11119.1359-25C76.04
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A16.53
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H24.14
medulla oblongata, adult.CNhs10477.17-12C25.62
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.09
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.08
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I76.25
ovary, embryo E18.CNhs11040.505-44H77.83
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E46.64
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.99
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C77.50
pituitary gland, embryo E14.CNhs11037.398-44A55.36
pituitary gland, embryo E15.CNhs10592.427-16B95.67
pituitary gland, embryo E16.CNhs11036.449-43F66.78
pituitary gland, embryo E17.CNhs11039.1265-44F57.24
pituitary gland, neonate N00.CNhs11190.1308-22E912.48
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G34.66
prostate, adult.CNhs10470.859-1F85.95
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H33.98
skin, neonate N06.CNhs11097.693-20I53.94
skin, neonate N10.CNhs11108.762-6C43.28
small intestine, neonate N16.CNhs11114.790-21I17.58
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C14.54
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D13.39
spleen, neonate N20.CNhs11112.824-19H13.96
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C93.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.49
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E36.33
stomach, embryo E15.CNhs10603.1252-16G83.25
stomach, embryo E16.CNhs11022.459-17D44.00
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C65.68
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A94.30
stomach, neonate N25.CNhs11104.1355-25E44.45
stomach, neonate N30.CNhs11134.1386-42I14.41
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G574.97
testis, embryo E13.CNhs11031.389-23F56.73
testis, embryo E15.CNhs11034.443-27C54.63
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I56.33
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I44.43
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E229.67
thymus, adult.CNhs10471.38-12B55.06
thymus, embryo E14.CNhs11041.402-44I45.27
thymus, embryo E15.CNhs11005.430-45I24.72
thymus, embryo E16.CNhs11002.456-26C53.90
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F83.25
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D33.12
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A23.12
thymus, neonate N25.CNhs11125.1362-25G73.08
thymus, neonate N30.CNhs11132.1393-42G23.16
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F510.51
uterus, adult.CNhs10509.92-27E55.68
vagina, adult.CNhs10502.89-27D54.93
vesicular gland, adult.CNhs10491.51-27F87.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.60
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.18
whole body, embryo E11.CNhs11014.324-5I86.12
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H25.63
whole body, embryo E14.5.CNhs10578.420-27D25.35
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F25.15
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.53
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.54
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.82
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F93.67
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B35.15
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C65.36
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:69805135..69805140,%2B&oldid=744054"