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FFCP PHASE1:Mm9::chr1:173275762..173275784,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr1:173275762..173275784,-
|short_description=p1@Nit1
|description=CAGE_peak_1_at_Nit1_5end
|association_with_transcript=0bp_to_ENSMUST00000111289,ENSMUST00000111295,ENSMUST00000141357,ENSMUST00000148339,NM_001242580,NM_012049,uc007doa.2,uc007dob.2_5end
|EntrezGene=27045
|EntrezGene=27045
|HGNC=
|HGNC=
|UniProt=D3YY54,Q8VDK1,D3Z2Y2
|UniProt=D3YY54,Q8VDK1,D3Z2Y2
|association_with_transcript=0bp_to_ENSMUST00000111289,ENSMUST00000111295,ENSMUST00000141357,ENSMUST00000148339,NM_001242580,NM_012049,uc007doa.2,uc007dob.2_5end
|description=CAGE_peak_1_at_Nit1_5end
|id=chr1:173275762..173275784,-
|ontology_enrichment_disease=
|phase1_expression=15.8547358633746,12.9120900826564,15.0149748998547,22.0798874253986,25.5456822272637,7.55456723603504,13.5495331545405,15.1074288426644,6.89864738543167,3.04283884218592,14.7247452673934,6.06268408364557,25.6801094896809,13.1130603628496,16.9885978525988,15.1856450542369,13.9912375625629,18.4545366734569,21.8011949433125,14.004858509335,32.4865368377087,24.3262830442169,17.2391860831697,25.2788028013583,23.3997466688513,14.3557991028755,19.8150518233174,19.6078821744159,36.8645433745365,15.8778981748756,16.6297882991479,10.1604907753541,11.0711661765223,0,37.2618589479144,40.2287841767551,30.8295727956177,42.6902263351646,27.346737058333,30.3643771504803,48.2349820185432,29.3709558532132,33.9857247121808,16.1147927008739,14.6996550268296,15.2343804294196,19.559783608701,15.9158364157726,20.4308149943059,23.9148775861369,22.1178546168073,35.9381410912429,15.7715649694272,11.6057942721815,14.7881271622684,12.6057123657614,17.1920063963254,14.4388185837684,18.4107979382234,22.7466121086974,18.3811107016792,13.2149367506962,25.789549087223,15.2982951937838,21.7550599764734,18.4724829885986,17.6764065205859,11.9107674649682,18.2493717662921,17.4157660447881,14.5124223332454,19.9955689082663,20.0990372265968,20.0884910712525,17.2521847832825,21.1420320920305,15.4162233399144,18.6423513604374,19.6616362567992,15.9582408153535,18.6634792948916,16.6692278578163,24.5681039121215,14.069065250792,16.6550090076723,16.2045722010517,17.0846016958924,16.0303523409758,9.31432177998164,11.638020256445,16.5222758559956,88.6236593290828,57.117592031451,98.7656840697205,151.397905265307,150.985060951802,33.9875496718839,13.1231348385104,6.75443611967459,10.2468476607999,20.281452447842,5.13305909657271,10.1922095882658,0,38.9683873820185,43.8312567271921,34.88118670602,45.3310002484668,22.2686579936568,55.6658021493093,26.3697696684527,58.152906357619,41.7414050033466,52.9036468339705,40.215337840411,46.3709722006503,115.440049931953,52.344967205008,15.9229899350977,15.6913844448987,14.575540218386,24.7286379098963,108.107221506511,36.8903804234549,26.8091784721222,72.8052607344485,14.1381846916986,17.9970819298022,16.3920592924253,39.8443100816828,33.3975440057597,19.7277332817197,49.3661069346065,37.0787413128979,43.4277013129481,33.4217001919581,18.1274067653563,32.5946262998444,98.3091530306995,63.7638823336016,30.7084245391981,25.5191335921155,29.5301892880773,28.3325057531144,21.7716797284249,25.62274405697,22.0199052715363,43.7208696548936,27.8082710883366,24.2055782614809,26.2167175004284,26.5226836237366,27.5266776733342,26.8154168222068,30.6615383247836,26.8696260204966,21.7686088067103,15.1835265197682,16.76564646434,33.1401236056803,32.1300702174102,26.2890609733082,33.3810077175146,29.5146347621106,31.3162239161378,32.0896843755563,27.0956135413615,24.2871912123713,22.2155797383199,20.1925980817287,23.9152988160274,27.7779976108131,35.5671186771502,27.2439030083555,41.6374098156972,22.6390147234426,139.767145202147,41.2542883995129,31.7799493297499,25.3137972327878,30.9281907173024,47.1939447618621,69.1595716357547,77.9925067061493,52.1981967698963,97.5017811966144,62.5824669912671,67.4462440219501,62.3885078781184,62.0185391971413,65.4898291120324,68.7037392727567,30.9158678553523,30.2758558415781,25.9227792048085,36.8608903400019,38.4025924591899,31.1403040313014,41.2302222050157,70.852871030209,88.7042812303768,94.1520360723338,105.240682615938,26.0278364917107,31.8425572083389,33.7293168577281,43.0063457343626,50.1648492285027,52.4529254669725,88.0350180599481,90.1471860869197,93.6254418971358,51.7565543498476,101.222337765833,112.333562321242,118.459493757195,151.94960925306,110.479566392211,35.1031061316549,24.8233749419335,20.8595169845793,22.4063513223248,27.4587590497547,29.8161138246432,35.7065461329021,23.0257704472203,29.6354070919639,26.1328333785554,20.2507556195009,28.6760800752541,25.9027472798843,29.2191098334653,22.6186925908908,24.4757557718419,43.7670202986942,37.8033342437484,37.7293886471311,34.2258124849233,9.50822683184717,32.0638077549554,10.7272794601527,16.0079885161622,11.4174400798383,8.12493913038677,13.3679204449436,8.77537245445381,6.47697122679831,9.64444331107329,9.88219444866309,33.4174169078679,42.5820255624806,26.3537093427538,19.8722090411363,36.4583971769303,42.4784442687881,31.0759214278376,31.1393263673694,32.0628635585027,32.483208216885,34.4327365697199,30.7529668870183,25.4473610634254,23.5288269733916,24.3348303610578,33.7339547439996,29.9093075419742,46.2997863825152,29.7100805151662,40.2305506564366,36.0086218853075,37.9508099994465,29.7875925395458,31.7579609762093,35.3179340972935,39.8941903708308,44.4847348814022,85.5650184453252,28.855094264759,24.5425928577776,21.3507754245672,27.4556391207214,28.3963756558956,52.1750697567433,32.0785772478182,23.0675689077101,23.9408766837338,25.1864557222808,23.169320211577,25.8352090392738,21.0475919350001,10.1987057996313,16.5142713741916,12.9907975376158,90.6937087114358,30.8427593741607,26.4315307264903,30.457506111748,30.317802922098,48.6948517153976,44.2355056142212,38.3512034565559,45.2837779632371,51.8459893167171,54.0565202385625,223.786096657624,28.5576602943999,26.6388169635927,30.1399341933274,27.2527227538013,28.3846290824507,24.7623773542541,20.7024971901881,22.4398997071021,76.5821663018439,105.418982290379,33.1811676659587,29.8006066476541,30.915998106613,30.2715517538262,27.9281645241271,25.6298947667832,19.5918582717549,23.4826348207578,25.8474111867258,27.4344503957999,24.1982844328417,30.7966903137618,25.688561717968,32.6086557086577,42.3985817360445,19.7567498502918,13.0982230649835,16.9563462527719,53.3203279528846,40.9147796483577,34.2493537379786,49.0903588091061,63.6996572124911,40.0973808258117,41.8895965221531,36.6653128601214,44.6818274093588,32.1988784292202,37.769694869485,38.4762825132129,52.2372595740096,48.4862377613099,55.4003533574447,24.2862393346973,17.5570944296454,27.6588441321697,28.929699331127,32.4900402073373,36.7687016900028,39.1154240930843,37.2923453602398,39.1521435702015,31.8398486822385,35.994060584414,34.3299941322659,30.7144144501214,29.6436455634545,28.0285088503393,28.5776214769844,22.481559233302,22.9561972351809,30.906442560248,33.2669559503738,36.6870100052395,30.8807902717247,27.4201618439419,35.4645256582882,33.1265019061964,29.1920397226284,30.7318994426258,32.3575745068547,31.5065544122399,42.6468126459881,27.7605942410567,26.8917236885288,27.0092488491995,28.6633156194037,37.2309759193603,29.7274587746156,37.6629889597108,34.594239701776,24.6761948368808,26.4709702943419,23.650519233283
|phase1_expression=15.8547358633746,12.9120900826564,15.0149748998547,22.0798874253986,25.5456822272637,7.55456723603504,13.5495331545405,15.1074288426644,6.89864738543167,3.04283884218592,14.7247452673934,6.06268408364557,25.6801094896809,13.1130603628496,16.9885978525988,15.1856450542369,13.9912375625629,18.4545366734569,21.8011949433125,14.004858509335,32.4865368377087,24.3262830442169,17.2391860831697,25.2788028013583,23.3997466688513,14.3557991028755,19.8150518233174,19.6078821744159,36.8645433745365,15.8778981748756,16.6297882991479,10.1604907753541,11.0711661765223,0,37.2618589479144,40.2287841767551,30.8295727956177,42.6902263351646,27.346737058333,30.3643771504803,48.2349820185432,29.3709558532132,33.9857247121808,16.1147927008739,14.6996550268296,15.2343804294196,19.559783608701,15.9158364157726,20.4308149943059,23.9148775861369,22.1178546168073,35.9381410912429,15.7715649694272,11.6057942721815,14.7881271622684,12.6057123657614,17.1920063963254,14.4388185837684,18.4107979382234,22.7466121086974,18.3811107016792,13.2149367506962,25.789549087223,15.2982951937838,21.7550599764734,18.4724829885986,17.6764065205859,11.9107674649682,18.2493717662921,17.4157660447881,14.5124223332454,19.9955689082663,20.0990372265968,20.0884910712525,17.2521847832825,21.1420320920305,15.4162233399144,18.6423513604374,19.6616362567992,15.9582408153535,18.6634792948916,16.6692278578163,24.5681039121215,14.069065250792,16.6550090076723,16.2045722010517,17.0846016958924,16.0303523409758,9.31432177998164,11.638020256445,16.5222758559956,88.6236593290828,57.117592031451,98.7656840697205,151.397905265307,150.985060951802,33.9875496718839,13.1231348385104,6.75443611967459,10.2468476607999,20.281452447842,5.13305909657271,10.1922095882658,0,38.9683873820185,43.8312567271921,34.88118670602,45.3310002484668,22.2686579936568,55.6658021493093,26.3697696684527,58.152906357619,41.7414050033466,52.9036468339705,40.215337840411,46.3709722006503,115.440049931953,52.344967205008,15.9229899350977,15.6913844448987,14.575540218386,24.7286379098963,108.107221506511,36.8903804234549,26.8091784721222,72.8052607344485,14.1381846916986,17.9970819298022,16.3920592924253,39.8443100816828,33.3975440057597,19.7277332817197,49.3661069346065,37.0787413128979,43.4277013129481,33.4217001919581,18.1274067653563,32.5946262998444,98.3091530306995,63.7638823336016,30.7084245391981,25.5191335921155,29.5301892880773,28.3325057531144,21.7716797284249,25.62274405697,22.0199052715363,43.7208696548936,27.8082710883366,24.2055782614809,26.2167175004284,26.5226836237366,27.5266776733342,26.8154168222068,30.6615383247836,26.8696260204966,21.7686088067103,15.1835265197682,16.76564646434,33.1401236056803,32.1300702174102,26.2890609733082,33.3810077175146,29.5146347621106,31.3162239161378,32.0896843755563,27.0956135413615,24.2871912123713,22.2155797383199,20.1925980817287,23.9152988160274,27.7779976108131,35.5671186771502,27.2439030083555,41.6374098156972,22.6390147234426,139.767145202147,41.2542883995129,31.7799493297499,25.3137972327878,30.9281907173024,47.1939447618621,69.1595716357547,77.9925067061493,52.1981967698963,97.5017811966144,62.5824669912671,67.4462440219501,62.3885078781184,62.0185391971413,65.4898291120324,68.7037392727567,30.9158678553523,30.2758558415781,25.9227792048085,36.8608903400019,38.4025924591899,31.1403040313014,41.2302222050157,70.852871030209,88.7042812303768,94.1520360723338,105.240682615938,26.0278364917107,31.8425572083389,33.7293168577281,43.0063457343626,50.1648492285027,52.4529254669725,88.0350180599481,90.1471860869197,93.6254418971358,51.7565543498476,101.222337765833,112.333562321242,118.459493757195,151.94960925306,110.479566392211,35.1031061316549,24.8233749419335,20.8595169845793,22.4063513223248,27.4587590497547,29.8161138246432,35.7065461329021,23.0257704472203,29.6354070919639,26.1328333785554,20.2507556195009,28.6760800752541,25.9027472798843,29.2191098334653,22.6186925908908,24.4757557718419,43.7670202986942,37.8033342437484,37.7293886471311,34.2258124849233,9.50822683184717,32.0638077549554,10.7272794601527,16.0079885161622,11.4174400798383,8.12493913038677,13.3679204449436,8.77537245445381,6.47697122679831,9.64444331107329,9.88219444866309,33.4174169078679,42.5820255624806,26.3537093427538,19.8722090411363,36.4583971769303,42.4784442687881,31.0759214278376,31.1393263673694,32.0628635585027,32.483208216885,34.4327365697199,30.7529668870183,25.4473610634254,23.5288269733916,24.3348303610578,33.7339547439996,29.9093075419742,46.2997863825152,29.7100805151662,40.2305506564366,36.0086218853075,37.9508099994465,29.7875925395458,31.7579609762093,35.3179340972935,39.8941903708308,44.4847348814022,85.5650184453252,28.855094264759,24.5425928577776,21.3507754245672,27.4556391207214,28.3963756558956,52.1750697567433,32.0785772478182,23.0675689077101,23.9408766837338,25.1864557222808,23.169320211577,25.8352090392738,21.0475919350001,10.1987057996313,16.5142713741916,12.9907975376158,90.6937087114358,30.8427593741607,26.4315307264903,30.457506111748,30.317802922098,48.6948517153976,44.2355056142212,38.3512034565559,45.2837779632371,51.8459893167171,54.0565202385625,223.786096657624,28.5576602943999,26.6388169635927,30.1399341933274,27.2527227538013,28.3846290824507,24.7623773542541,20.7024971901881,22.4398997071021,76.5821663018439,105.418982290379,33.1811676659587,29.8006066476541,30.915998106613,30.2715517538262,27.9281645241271,25.6298947667832,19.5918582717549,23.4826348207578,25.8474111867258,27.4344503957999,24.1982844328417,30.7966903137618,25.688561717968,32.6086557086577,42.3985817360445,19.7567498502918,13.0982230649835,16.9563462527719,53.3203279528846,40.9147796483577,34.2493537379786,49.0903588091061,63.6996572124911,40.0973808258117,41.8895965221531,36.6653128601214,44.6818274093588,32.1988784292202,37.769694869485,38.4762825132129,52.2372595740096,48.4862377613099,55.4003533574447,24.2862393346973,17.5570944296454,27.6588441321697,28.929699331127,32.4900402073373,36.7687016900028,39.1154240930843,37.2923453602398,39.1521435702015,31.8398486822385,35.994060584414,34.3299941322659,30.7144144501214,29.6436455634545,28.0285088503393,28.5776214769844,22.481559233302,22.9561972351809,30.906442560248,33.2669559503738,36.6870100052395,30.8807902717247,27.4201618439419,35.4645256582882,33.1265019061964,29.1920397226284,30.7318994426258,32.3575745068547,31.5065544122399,42.6468126459881,27.7605942410567,26.8917236885288,27.0092488491995,28.6633156194037,37.2309759193603,29.7274587746156,37.6629889597108,34.594239701776,24.6761948368808,26.4709702943419,23.650519233283
|short_description=p1@Nit1
}}
}}

Revision as of 06:33, 18 April 2012

Short description:p1@Nit1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nit1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000111289, ENSMUST00000111295, ENSMUST00000141357, ENSMUST00000148339, NM_001242580, NM_012049, uc007doa.2, uc007dob.2_5end
EntrezGene:Nit1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nit1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G715.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I615.01
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.08
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I813.55
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E915.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E76.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E614.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F16.06
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.68
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A116.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.19
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.99
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.45
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A421.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A614.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H224.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.24
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D223.40
GP2+ M cell, pool1.CNhs13228.11845-124H914.36
GP2+ M cell, pool2.CNhs13231.11846-124I119.82
GP2+ M cell, pool3.CNhs13240.11847-124I219.61
Ileum epithelium, pool1.CNhs13199.10252-104B936.86
Ileum epithelium, pool2.CNhs13232.10253-104C115.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.63
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.16
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F537.26
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F640.23
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F730.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G842.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H127.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H330.36
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G948.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H229.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H433.99
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.11
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D914.70
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.23
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B719.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.92
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B820.43
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.91
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C435.94
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A215.77
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.79
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.61
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E117.19
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C514.44
Mouse Granule cells, donor1.CNhs12131.11713-123C318.41
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D125.79
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D218.47
Mouse Microglia, donor1.CNhs12629.11718-123C817.68
Mouse Microglia, donor2.CNhs12634.11736-123E811.91
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.25
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.42
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.09
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F217.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D621.14
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D315.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.66
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.96
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F418.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E424.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.07
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I616.66
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.03
Mouse Schwann, donor1.CNhs12507.11728-123D99.31
Mouse Schwann, donor2.CNhs12573.11746-123F911.64
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F788.62
Mouse hepatocyte, donor1.CNhs13078.11714-123C457.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C898.77
Mouse hepatocyte, donor6.CNhs13090.11822-124F4151.40
Mouse hepatocyte, donor8.CNhs13091.11824-124F6150.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A733.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I713.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E36.75
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I810.25
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G138.97
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G243.83
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G334.88
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B645.33
accessory axillary lymph node, adult.CNhs10475.1063-29H922.27
adrenal gland, adult.CNhs10508.49-24D755.67
adrenal gland, embryo E14.CNhs11038.406-44C526.37
adrenal gland, embryo E16.CNhs11004.1254-43D658.15
adrenal gland, embryo E17.CNhs11043.1263-45I141.74
adrenal gland, embryo E18.CNhs11026.1262-18F552.90
adrenal gland, neonate N00.CNhs11191.1311-23C140.22
adrenal gland, neonate N25.CNhs11223.1377-27I346.37
amnion, adult pregnant day17.5.CNhs10488.583-22A8115.44
aorta, adult.CNhs10498.46-23H152.34
bone (os femoris), adult.CNhs10483.56-12G215.92
bone (os femoris), neonate N02.CNhs11227.1985-43F515.69
bone (os femoris), neonate N16.CNhs11225.1525-43A614.58
bone (os femoris), neonate N20.CNhs11195.1350-25C324.73
cecum, adult.CNhs10467.37-13H4108.11
cerebellum, adult.CNhs10494.15-8B236.89
cerebellum, neonate N30.CNhs11135.1395-42I226.81
colon, adult.CNhs10468.36-18H772.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.14
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.39
corpora quadrigemina, adult.CNhs10501.16-22A439.84
corpus striatum, adult.CNhs10487.19-21D833.40
corpus striatum, neonate N00.CNhs11226.630-43F119.73
cortex, adult.CNhs10473.12-14D549.37
cortex, neonate N30.CNhs11107.1392-42F237.08
diencephalon, adult.CNhs10482.20-12F243.43
diencephalon, neonate N30.CNhs11201.1388-42B233.42
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.13
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A232.59
epididymis, adult.CNhs10490.58-23B298.31
eyeball, adult.CNhs10484.31-12G463.76
eyeball, embryo E12.CNhs11016.345-16C630.71
eyeball, embryo E14.CNhs10521.399-16E225.52
eyeball, embryo E15.CNhs10593.426-16C929.53
eyeball, embryo E17.CNhs11023.1261-18D428.33
eyeball, neonate N00.CNhs11207.633-15C621.77
eyeball, neonate N01.CNhs11140.1532-43E725.62
eyeball, neonate N02.CNhs11205.1551-44G822.02
eyeball, neonate N16.CNhs11188.777-19A243.72
forelimb, embryo E11.CNhs10596.335-25E227.81
forelimb, embryo E12.CNhs10600.359-14H224.21
forelimb, embryo E13.CNhs10589.384-1E226.22
forelimb, embryo E14.CNhs10577.413-26A826.52
forelimb, embryo E15.CNhs11007.437-20E727.53
forelimb, embryo E17.CNhs10598.1517-43C426.82
forelimb, embryo E18.CNhs11008.1520-43B530.66
gonad, embryo E13.CNhs11044.1564-45I626.87
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C821.77
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D215.18
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D516.77
heart, embryo E11.CNhs10586.331-24E933.14
heart, embryo E12.CNhs11015.353-12F532.13
heart, embryo E13.CNhs11013.376-3I926.29
heart, embryo E14.CNhs10597.403-26D433.38
heart, embryo E15.CNhs11017.431-16C829.51
heart, embryo E16.CNhs11021.457-17C631.32
heart, embryo E17.CNhs11025.479-18E532.09
heart, embryo E18.CNhs11030.1283-20G327.10
heart, neonate N00.CNhs11213.639-21E324.29
heart, neonate N03.CNhs11221.1349-25I222.22
heart, neonate N10.CNhs11118.749-24G120.19
heart, neonate N16.CNhs11209.782-15G123.92
heart, neonate N20.CNhs11127.821-26I627.78
heart, neonate N25.CNhs11196.1351-25D335.57
heart, neonate N30.CNhs11202.1390-42D227.24
hippocampus, adult.CNhs10478.13-16E841.64
hippocampus, neonate N00.CNhs11228.627-43G122.64
intestinal mucosa, adult.CNhs10506.860-29I3139.77
intestine, adult.CNhs10496.178-9A341.25
intestine, embryo E12.CNhs11019.1251-16I531.78
intestine, embryo E13.CNhs11010.381-16D525.31
intestine, embryo E15.CNhs10602.976-16D830.93
intestine, embryo E16.CNhs10585.463-22H447.19
intestine, embryo E17.CNhs10582.482-18D369.16
intestine, embryo E18.CNhs10526.1289-20F777.99
intestine, neonate N00.CNhs11126.644-26D152.20
intestine, neonate N01.CNhs11192.1322-23E997.50
intestine, neonate N06.CNhs11102.688-20B862.58
intestine, neonate N07.CNhs11095.720-20F267.45
intestine, neonate N10.CNhs11098.755-23A562.39
intestine, neonate N20.CNhs11187.827-18D162.02
intestine, neonate N25.CNhs11121.1352-25E365.49
intestine, neonate N30.CNhs11131.1384-42G168.70
kidney, embryo E14.CNhs10606.411-4I930.92
kidney, embryo E15.CNhs10997.434-16F830.28
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I236.86
kidney, embryo E18.CNhs11001.1288-20C738.40
kidney, neonate N00.CNhs11214.646-21G731.14
kidney, neonate N10.CNhs11206.758-6D541.23
kidney, neonate N20.CNhs11113.832-19I170.85
kidney, neonate N25.CNhs11122.1353-25F388.70
kidney, neonate N30.CNhs11203.1385-42H194.15
liver, adult pregnant day01.CNhs10466.508-5B2105.24
liver, embryo E12.CNhs10601.355-15F826.03
liver, embryo E13.CNhs10524.378-3H631.84
liver, embryo E14.CNhs10594.409-16E133.73
liver, embryo E15.CNhs10520.433-16D743.01
liver, embryo E16.CNhs10523.462-17F550.16
liver, embryo E17.CNhs10510.481-18A352.45
liver, embryo E18.CNhs10579.499-43G488.04
liver, neonate N00.CNhs11117.641-24F490.15
liver, neonate N03.CNhs11123.1345-25G293.63
liver, neonate N06.CNhs11101.684-20A851.76
liver, neonate N07.CNhs11103.716-20H2101.22
liver, neonate N10.CNhs11115.751-24B9112.33
liver, neonate N20.CNhs11220.823-25A3118.46
liver, neonate N25.CNhs11198.1368-26H1151.95
liver, neonate N30.CNhs11106.1382-42D1110.48
lung, adult.CNhs10474.28-22B135.10
lung, embryo E12.CNhs10522.354-16G224.82
lung, embryo E14.CNhs10604.404-26F820.86
lung, embryo E15.CNhs11020.432-17C522.41
lung, embryo E16.CNhs10998.458-17B627.46
lung, embryo E17.CNhs10605.480-44A629.82
lung, embryo E18.CNhs10583.1287-20I635.71
lung, neonate N00.CNhs11224.640-42C623.03
lung, neonate N06.CNhs11212.683-20E529.64
lung, neonate N07.CNhs11111.715-19A326.13
lung, neonate N10.CNhs11219.750-23E620.25
lung, neonate N20.CNhs11109.822-18A428.68
lung, neonate N25.CNhs11119.1359-25C725.90
lung, neonate N30.CNhs11133.1394-42H229.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A122.62
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A124.48
mammary gland, adult lactating day02.CNhs10480.595-22B643.77
mammary gland, adult pregnant day19.CNhs10476.588-5H237.80
medulla oblongata, adult.CNhs10477.17-12C237.73
medulla oblongata, neonate N30.CNhs11200.1396-42A334.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.51
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C232.06
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E110.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E311.42
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.37
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D98.78
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.64
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D69.88
olfactory brain, adult.CNhs10489.18-22I933.42
ovary, adult.CNhs10507.91-2I742.58
ovary, embryo E18.CNhs11040.505-44H726.35
ovary, neonate N00.CNhs11217.1299-22I419.87
oviduct, adult pregnant day01.CNhs10500.988-6G636.46
pancreas, adult.CNhs10486.34-16E442.48
pancreas, embryo E14.CNhs11012.405-44F431.08
pancreas, embryo E15.CNhs11042.1556-45F231.14
pancreas, embryo E16.CNhs11003.460-26E532.06
pancreas, embryo E17.CNhs10599.1558-45G332.48
pancreas, embryo E18.CNhs10580.1535-43I734.43
pancreas, neonate N00.CNhs11105.645-26G930.75
pancreas, neonate N01.CNhs11138.1531-43D725.45
pancreas, neonate N02.CNhs11139.1539-43D823.53
pancreas, neonate N16.CNhs11136.787-43B624.33
pancreas, neonate N25.CNhs11094.1555-45E233.73
pancreas, neonate N30.CNhs11182.1548-44H529.91
pituitary gland, adult.CNhs10493.21-1G846.30
pituitary gland, embryo E12.CNhs11018.346-16E629.71
pituitary gland, embryo E13.CNhs11009.370-44C740.23
pituitary gland, embryo E14.CNhs11037.398-44A536.01
pituitary gland, embryo E15.CNhs10592.427-16B937.95
pituitary gland, embryo E16.CNhs11036.449-43F629.79
pituitary gland, embryo E17.CNhs11039.1265-44F531.76
pituitary gland, neonate N00.CNhs11190.1308-22E935.32
placenta, adult pregnant day10.CNhs10472.539-13I739.89
placenta, adult pregnant day17.CNhs10464.577-18G344.48
prostate, adult.CNhs10470.859-1F885.57
skin, adult.CNhs10492.30-1C328.86
skin, neonate N00.CNhs11124.650-25G424.54
skin, neonate N03.CNhs11215.662-22H321.35
skin, neonate N06.CNhs11097.693-20I527.46
skin, neonate N10.CNhs11108.762-6C428.40
small intestine, neonate N16.CNhs11114.790-21I152.18
spinal cord, adult.CNhs10505.24-13C932.08
spleen, adult.CNhs10465.25-2G223.07
spleen, embryo E16.CNhs11035.461-43C123.94
spleen, embryo E18.CNhs11011.1271-21F225.19
spleen, neonate N10.CNhs11116.752-24D123.17
spleen, neonate N20.CNhs11112.824-19H125.84
spleen, neonate N25.CNhs11099.1354-25G321.05
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.99
stomach, adult.CNhs10503.33-1H690.69
stomach, embryo E12.CNhs10588.356-43E330.84
stomach, embryo E15.CNhs10603.1252-16G826.43
stomach, embryo E16.CNhs11022.459-17D430.46
stomach, embryo E17.CNhs11006.1035-18D530.32
stomach, embryo E18.CNhs10999.1286-20C648.69
stomach, neonate N03.CNhs11193.1340-24B844.24
stomach, neonate N07.CNhs11210.718-18A938.35
stomach, neonate N25.CNhs11104.1355-25E445.28
stomach, neonate N30.CNhs11134.1386-42I151.85
submandibular gland, adult.CNhs10469.59-29C154.06
testis, adult.CNhs10504.57-7G5223.79
testis, embryo E13.CNhs11031.389-23F528.56
testis, embryo E15.CNhs11034.443-27C526.64
testis, embryo E16.CNhs11033.470-26G530.14
testis, embryo E17.CNhs11029.486-18I527.25
testis, embryo E18.CNhs11027.503-18G528.38
testis, neonate N00.CNhs11189.1300-22B724.76
testis, neonate N07.CNhs11222.726-26I420.70
testis, neonate N10.CNhs11204.763-44D922.44
testis, neonate N20.CNhs11110.839-18H376.58
testis, neonate N30.CNhs11130.1391-42E2105.42
thymus, adult.CNhs10471.38-12B533.18
thymus, embryo E14.CNhs11041.402-44I429.80
thymus, embryo E15.CNhs11005.430-45I230.92
thymus, embryo E16.CNhs11002.456-26C530.27
thymus, embryo E17.CNhs10581.478-18C127.93
thymus, embryo E18.CNhs10595.1273-19G425.63
thymus, neonate N02.CNhs11181.1541-43F819.59
thymus, neonate N03.CNhs11137.2104-43C723.48
thymus, neonate N06.CNhs11197.681-26C425.85
thymus, neonate N07.CNhs11211.713-19D327.43
thymus, neonate N10.CNhs11194.748-24E424.20
thymus, neonate N20.CNhs11186.820-7A230.80
thymus, neonate N25.CNhs11125.1362-25G725.69
thymus, neonate N30.CNhs11132.1393-42G232.61
tongue, adult.CNhs10499.32-1B442.40
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.76
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.10
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G516.96
urinary bladder, adult.CNhs10481.879-12E453.32
uterus, adult pregnant day19.CNhs10497.590-15F540.91
uterus, adult.CNhs10509.92-27E534.25
vagina, adult.CNhs10502.89-27D549.09
vesicular gland, adult.CNhs10491.51-27F863.70
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A140.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A336.67
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D744.68
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A432.20
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A537.77
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A638.48
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A752.24
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A848.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A955.40
whole body, embryo E11.CNhs11014.324-5I824.29
whole body, embryo E12.CNhs10587.857-27C917.56
whole body, embryo E13.CNhs10512.372-23H227.66
whole body, embryo E14.5.CNhs10578.420-27D228.93
whole body, embryo E14.CNhs10519.395-14B132.49
whole body, embryo E16.CNhs10514.453-14F236.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G539.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G537.29
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.15
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G531.84
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G535.99
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G534.33
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G530.71
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G529.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.48
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G522.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G530.91
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G533.27
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G536.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G530.88
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G535.46
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.19
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G530.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.51
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G542.65
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G527.76
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.66
whole body, embryo E17.5.CNhs10513.490-9F937.23
whole body, embryo E17.CNhs10517.475-3I529.73
whole body, embryo E18.CNhs10516.493-3B337.66
whole body, neonate N00.CNhs10525.657-19C234.59
whole body, neonate N01.CNhs10576.659-23C624.68
whole body, neonate N06.CNhs10515.692-21D126.47
whole body, neonate N10.CNhs10518.761-6B423.65





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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