Personal tools

FFCP PHASE1:Mm9::chr10:57834157..57834247,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 8: Line 8:
|ontology_enrichment_celltype=CL:0000988!2.90e-09!32;CL:0002032!2.90e-09!32;CL:0000037!2.90e-09!32;CL:0000566!2.90e-09!32;CL:0000837!2.90e-09!32;CL:0000084!5.40e-08!11;CL:0000827!5.40e-08!11;CL:0002031!9.26e-08!25;CL:0000838!1.24e-07!12;CL:0000542!2.05e-07!13;CL:0000051!2.05e-07!13;CL:0000791!8.55e-07!9;CL:0000789!8.55e-07!9;CL:0002420!8.55e-07!9;CL:0002419!8.55e-07!9;CL:0000790!8.55e-07!9
|ontology_enrichment_celltype=CL:0000988!2.90e-09!32;CL:0002032!2.90e-09!32;CL:0000037!2.90e-09!32;CL:0000566!2.90e-09!32;CL:0000837!2.90e-09!32;CL:0000084!5.40e-08!11;CL:0000827!5.40e-08!11;CL:0002031!9.26e-08!25;CL:0000838!1.24e-07!12;CL:0000542!2.05e-07!13;CL:0000051!2.05e-07!13;CL:0000791!8.55e-07!9;CL:0000789!8.55e-07!9;CL:0002420!8.55e-07!9;CL:0002419!8.55e-07!9;CL:0000790!8.55e-07!9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000077!5.49e-17!97;UBERON:0001041!1.22e-15!92;UBERON:0001004!2.01e-12!42;UBERON:0000065!3.82e-12!41;UBERON:0004177!1.23e-11!29;UBERON:0003104!1.25e-11!131;UBERON:0009142!1.25e-11!131;UBERON:0000926!4.13e-11!193;UBERON:0004120!4.13e-11!193;UBERON:0006603!4.13e-11!193;UBERON:0004119!6.46e-11!130;UBERON:0000925!6.46e-11!130;UBERON:0006595!6.46e-11!130;UBERON:0004921!8.93e-11!126;UBERON:0004185!8.93e-11!126;UBERON:0001007!1.28e-10!128;UBERON:0001555!1.28e-10!128;UBERON:0007026!1.28e-10!128;UBERON:0005057!8.90e-10!51;UBERON:0002193!1.91e-09!48;UBERON:0002390!2.33e-09!45;UBERON:0003061!2.33e-09!45;UBERON:0002405!4.05e-09!70;UBERON:0000072!4.21e-09!27;UBERON:0003408!4.30e-09!24;UBERON:0002370!7.70e-09!23;UBERON:0000974!7.70e-09!23;UBERON:0004807!7.70e-09!23;UBERON:0005058!7.70e-09!23;UBERON:0003351!7.70e-09!23;UBERON:0009113!7.70e-09!23;UBERON:0003295!7.70e-09!23;UBERON:0009722!7.70e-09!23;UBERON:0005562!7.70e-09!23;UBERON:0007690!7.70e-09!23;UBERON:0006562!2.04e-08!24;UBERON:0001557!2.04e-08!24;UBERON:0001042!2.04e-08!24;UBERON:0008814!2.04e-08!24;UBERON:0009145!2.04e-08!24;UBERON:0001048!4.63e-08!147;UBERON:0003081!2.85e-07!88
|phase1_expression=0.160148847104794,0,0,0,0,1.17515490338323,0.700837921786577,14.8491821957813,25.764336153755,26.9174205270293,21.2310280599626,12.6837732802585,72.4179087609,68.450175094075,9.32707333083856,10.9336644390506,9.09430441566591,8.20201629931418,11.9289557236993,3.39511721438424,2.89147186513637,25.8156473122302,24.291580389921,1.11994695955385,0.91763712426868,0.57423196411502,0,0,0.380046838912748,0.756090389279792,0.443461021310609,15.2407361630311,14.7615549020297,31.6963362030877,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0,0,1.51004345451963,23.211588544363,29.9123481236793,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0,5.79728977403356,0.860423876981386,0,0,0,0,2.66844398250329,0,0,0,0.845060518660083,0,0,0,3.89683873820185,3.04031838570118,4.54972000513305,2.51204535381932,22.5275958773039,1.03909497345377,1.56136794089522,1.52232739156071,2.53677046981664,0.301445281105245,1.05829836422134,0,1.97755974187499,1.87979163995885,7.96149496754887,1.45590164952668,3.97514733228708,6.30337829075789,0,2.04946557908083,1.25668024088073,2.81002760729451,10.4239158320151,8.39863823390771,11.5633906636489,0.299581278809645,0.915001205637253,0,0.695297280769106,0,0.20778804455956,0.324482526135515,0.407357455401265,6.34475550111474,3.0326731012041,5.05060454127538,1.43132487258974,0.919608417733892,0.360124259610698,0.90422890701429,0.136072998302656,0,0.281105173679186,2.06962696591213,0.862271971731369,0.945530400839096,1.23165786914764,0.43839146485515,0.556094498451196,0,0,1.39323986772945,2.80885274925294,2.31613116403244,2.84163499395593,3.10688658803253,7.73935997937617,4.14142741360334,2.60419209143731,3.14822770795846,1.23413690309903,1.39520366850245,1.07309360559848,0.817357396570186,0.987359099480883,1.64167464079095,1.37816976227955,1.16959989940266,0.878200461164203,1.47627060636409,0.210289948564127,0,1.98251269790279,0.793351699990633,1.70630600428187,1.85789337488351,1.9330119198314,0.201683524623343,0.667134131534611,1.33157938278791,0.949058123089023,0.988193728344065,3.2673577144035,1.59165177632921,1.55971269695296,2.69645822596266,0.864552199498777,0.995706366271836,0.569003702859245,1.14248512609729,0,1.4255592949172,0.969762435838129,0.841629838683823,1.58091342810643,1.03327103585722,0.941992367048249,0.987177311374404,0.296452627087149,24.3593854345497,22.6042844380183,28.7823503852613,30.4290182082754,31.3530307678142,19.6061905871693,12.3709339103849,6.97181475132652,3.84385978463314,1.43768206527355,2.60498663367952,0,0.252578877947112,0.538192240565737,0.964887042726734,10.9004382198297,1.32643988239339,1.30371981153621,1.01847051465113,1.17345124144251,5.86271901046355,9.99783291721258,5.65887578787617,8.6699329258405,12.1805579306826,9.24837658213425,8.68475567993411,12.7786886580763,9.83613598354279,0,1.08781136763742,0.491764273019036,1.10374698521893,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0.566153061577665,0,0.584511715822624,0.395287777946524,0.642642632843614,3.40656204499845,0.534196811001766,1.79175655288934,7.75359577970917,0,2.18502572539483,1.51161778482376,1.32023555829129,0.295301892880773,1.22974059177571,3.10113951801865,4.36240475373007,4.27796854061666,2.84433082142234,2.10837217149998,1.03135543248187,0,1.26042765821917,0.776152102696527,1.07168517515796,0.709360934569094,0.178368817602071,0.822745103010605,0,3.05073220482823,1.69465656691056,1.98475558249466,0.49465875882444,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0.874442509889552,0.741701208042039,16.0618627949982,7.01715351074956,15.7415348264255,16.1996873024034,19.5472745641066,11.4389086603261,17.677756719361,19.4532518729885,16.5839968565309,3.81868247206045,0.949007980743406,2.64315307264903,2.37611749807963,4.39085421630384,4.36725127492355,5.12484516262319,3.14083131756277,11.5172614472973,1.03691978633434,4.34937519160848,0,0.598066184175915,1.32366792365678,0.388902376688095,0.645799117388655,1.01373675294467,1.17357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0,48.6657125767395,3.04087822935246,7.39518891586756,9.22437843142345,10.7416017400489,19.6694541233452,22.2361581611942,23.3349452935832,25.2416124870369,26.0627278760099,35.0875124276205,44.5382514980669,44.6422945211129,63.3472809824104,0.906921534460845,0.665957860122194,1.97370484540847,0.167884616364078,21.8304241256375,2.62755465631655,9.34073283763052,9.00347192132076,3.00943262421218,0,0,0,0.515559547031063,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.93408612825759,5.1873233542134,3.92687293234509,4.86213434136588,7.1268475293514,1.10306105070008,1.77797382241292,2.88449080134452,1.28367683836726,2.02157769411038,1.52087579934144,2.26351609663291,2.43467919421694,1.6646539625266,2.01024141344646,1.42888107384922,2.20180219295225,2.12200142510076,3.29668720642645,2.64958056241915,1.71434626192708,2.66213709239006,2.14592570952589,2.90692833264657,2.4468438907986,1.60767754994185,1.82927972872773,2.36762740294059,2.58027816307137,1.68342681497322,1.89816028998679,1.97008964751127,2.04615521584845,2.63392630016142,2.12197272079256,0.249810577937946,2.8071793013449,0.644613162144895,0,1.54413993383661,2.08681052058379
|phase1_expression=0.160148847104794,0,0,0,0,1.17515490338323,0.700837921786577,14.8491821957813,25.764336153755,26.9174205270293,21.2310280599626,12.6837732802585,72.4179087609,68.450175094075,9.32707333083856,10.9336644390506,9.09430441566591,8.20201629931418,11.9289557236993,3.39511721438424,2.89147186513637,25.8156473122302,24.291580389921,1.11994695955385,0.91763712426868,0.57423196411502,0,0,0.380046838912748,0.756090389279792,0.443461021310609,15.2407361630311,14.7615549020297,31.6963362030877,0,0,0.204169356262369,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0.202753862439029,0,0,0.218025156380447,0,0.194429899074283,0,0,1.51004345451963,23.211588544363,29.9123481236793,0.257259436035947,0.573066879877513,1.54701627683233,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0,5.79728977403356,0.860423876981386,0,0,0,0,2.66844398250329,0,0,0,0.845060518660083,0,0,0,3.89683873820185,3.04031838570118,4.54972000513305,2.51204535381932,22.5275958773039,1.03909497345377,1.56136794089522,1.52232739156071,2.53677046981664,0.301445281105245,1.05829836422134,0,1.97755974187499,1.87979163995885,7.96149496754887,1.45590164952668,3.97514733228708,6.30337829075789,0,2.04946557908083,1.25668024088073,2.81002760729451,10.4239158320151,8.39863823390771,11.5633906636489,0.299581278809645,0.915001205637253,0,0.695297280769106,0,0.20778804455956,0.324482526135515,0.407357455401265,6.34475550111474,3.0326731012041,5.05060454127538,1.43132487258974,0.919608417733892,0.360124259610698,0.90422890701429,0.136072998302656,0,0.281105173679186,2.06962696591213,0.862271971731369,0.945530400839096,1.23165786914764,0.43839146485515,0.556094498451196,0,0,1.39323986772945,2.80885274925294,2.31613116403244,2.84163499395593,3.10688658803253,7.73935997937617,4.14142741360334,2.60419209143731,3.14822770795846,1.23413690309903,1.39520366850245,1.07309360559848,0.817357396570186,0.987359099480883,1.64167464079095,1.37816976227955,1.16959989940266,0.878200461164203,1.47627060636409,0.210289948564127,0,1.98251269790279,0.793351699990633,1.70630600428187,1.85789337488351,1.9330119198314,0.201683524623343,0.667134131534611,1.33157938278791,0.949058123089023,0.988193728344065,3.2673577144035,1.59165177632921,1.55971269695296,2.69645822596266,0.864552199498777,0.995706366271836,0.569003702859245,1.14248512609729,0,1.4255592949172,0.969762435838129,0.841629838683823,1.58091342810643,1.03327103585722,0.941992367048249,0.987177311374404,0.296452627087149,24.3593854345497,22.6042844380183,28.7823503852613,30.4290182082754,31.3530307678142,19.6061905871693,12.3709339103849,6.97181475132652,3.84385978463314,1.43768206527355,2.60498663367952,0,0.252578877947112,0.538192240565737,0.964887042726734,10.9004382198297,1.32643988239339,1.30371981153621,1.01847051465113,1.17345124144251,5.86271901046355,9.99783291721258,5.65887578787617,8.6699329258405,12.1805579306826,9.24837658213425,8.68475567993411,12.7786886580763,9.83613598354279,0,1.08781136763742,0.491764273019036,1.10374698521893,0.321101179975584,0.468846746368813,0,0,0,0,0,0,0,0.566153061577665,0,0.584511715822624,0.395287777946524,0.642642632843614,3.40656204499845,0.534196811001766,1.79175655288934,7.75359577970917,0,2.18502572539483,1.51161778482376,1.32023555829129,0.295301892880773,1.22974059177571,3.10113951801865,4.36240475373007,4.27796854061666,2.84433082142234,2.10837217149998,1.03135543248187,0,1.26042765821917,0.776152102696527,1.07168517515796,0.709360934569094,0.178368817602071,0.822745103010605,0,3.05073220482823,1.69465656691056,1.98475558249466,0.49465875882444,0.484393280087717,0.120625849856312,0.238744688006273,0.164140899745061,0.874442509889552,0.741701208042039,16.0618627949982,7.01715351074956,15.7415348264255,16.1996873024034,19.5472745641066,11.4389086603261,17.677756719361,19.4532518729885,16.5839968565309,3.81868247206045,0.949007980743406,2.64315307264903,2.37611749807963,4.39085421630384,4.36725127492355,5.12484516262319,3.14083131756277,11.5172614472973,1.03691978633434,4.34937519160848,0,0.598066184175915,1.32366792365678,0.388902376688095,0.645799117388655,1.01373675294467,1.17357238645754,0.13020438484395,0.419437377702843,0.241584120826006,0,48.6657125767395,3.04087822935246,7.39518891586756,9.22437843142345,10.7416017400489,19.6694541233452,22.2361581611942,23.3349452935832,25.2416124870369,26.0627278760099,35.0875124276205,44.5382514980669,44.6422945211129,63.3472809824104,0.906921534460845,0.665957860122194,1.97370484540847,0.167884616364078,21.8304241256375,2.62755465631655,9.34073283763052,9.00347192132076,3.00943262421218,0,0,0,0.515559547031063,0,0,0.675022500231806,1.35096360967266,0.453142408984205,0.51776031175182,0.93408612825759,5.1873233542134,3.92687293234509,4.86213434136588,7.1268475293514,1.10306105070008,1.77797382241292,2.88449080134452,1.28367683836726,2.02157769411038,1.52087579934144,2.26351609663291,2.43467919421694,1.6646539625266,2.01024141344646,1.42888107384922,2.20180219295225,2.12200142510076,3.29668720642645,2.64958056241915,1.71434626192708,2.66213709239006,2.14592570952589,2.90692833264657,2.4468438907986,1.60767754994185,1.82927972872773,2.36762740294059,2.58027816307137,1.68342681497322,1.89816028998679,1.97008964751127,2.04615521584845,2.63392630016142,2.12197272079256,0.249810577937946,2.8071793013449,0.644613162144895,0,1.54413993383661,2.08681052058379
|short_description=p4@Lims1
|short_description=p4@Lims1
}}
}}

Revision as of 11:43, 18 April 2012

Short description:p4@Lims1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Lims1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000171062, NM_201242, uc011xec.1_5end
EntrezGene:Lims1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Lims1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E914.85
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E725.76
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F226.92
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E621.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F112.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E472.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E868.45
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.93
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A28.20
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.93
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H225.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I924.29
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.24
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G614.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I923.21
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A129.91
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.90
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.51
accessory axillary lymph node, adult.CNhs10475.1063-29H922.53
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C11.06
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A81.98
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C710.42
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.56
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.34
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G45.05
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.84
heart, embryo E11.CNhs10586.331-24E93.11
heart, embryo E12.CNhs11015.353-12F57.74
heart, embryo E13.CNhs11013.376-3I94.14
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C83.15
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.38
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.93
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B83.27
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.84
kidney, neonate N10.CNhs11206.758-6D51.58
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.99
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F824.36
liver, embryo E13.CNhs10524.378-3H622.60
liver, embryo E14.CNhs10594.409-16E128.78
liver, embryo E15.CNhs10520.433-16D730.43
liver, embryo E16.CNhs10523.462-17F531.35
liver, embryo E17.CNhs10510.481-18A319.61
liver, embryo E18.CNhs10579.499-43G412.37
liver, neonate N00.CNhs11117.641-24F46.97
liver, neonate N03.CNhs11123.1345-25G23.84
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B110.90
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A65.86
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E58.67
lung, neonate N07.CNhs11111.715-19A312.18
lung, neonate N10.CNhs11219.750-23E69.25
lung, neonate N20.CNhs11109.822-18A48.68
lung, neonate N25.CNhs11119.1359-25C712.78
lung, neonate N30.CNhs11133.1394-42H29.84
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.47
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G67.75
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.32
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G93.10
pancreas, neonate N01.CNhs11138.1531-43D74.36
pancreas, neonate N02.CNhs11139.1539-43D84.28
pancreas, neonate N16.CNhs11136.787-43B62.84
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.05
placenta, adult pregnant day17.CNhs10464.577-18G31.69
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G216.06
spleen, embryo E16.CNhs11035.461-43C17.02
spleen, embryo E18.CNhs11011.1271-21F215.74
spleen, neonate N10.CNhs11116.752-24D116.20
spleen, neonate N20.CNhs11112.824-19H119.55
spleen, neonate N25.CNhs11099.1354-25G311.44
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.45
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D316.58
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D54.39
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B85.12
stomach, neonate N07.CNhs11210.718-18A93.14
stomach, neonate N25.CNhs11104.1355-25E411.52
stomach, neonate N30.CNhs11134.1386-42I11.04
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.32
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B548.67
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I27.40
thymus, embryo E16.CNhs11002.456-26C59.22
thymus, embryo E17.CNhs10581.478-18C110.74
thymus, embryo E18.CNhs10595.1273-19G419.67
thymus, neonate N02.CNhs11181.1541-43F822.24
thymus, neonate N03.CNhs11137.2104-43C723.33
thymus, neonate N06.CNhs11197.681-26C425.24
thymus, neonate N07.CNhs11211.713-19D326.06
thymus, neonate N10.CNhs11194.748-24E435.09
thymus, neonate N20.CNhs11186.820-7A244.54
thymus, neonate N25.CNhs11125.1362-25G744.64
thymus, neonate N30.CNhs11132.1393-42G263.35
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.97
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E421.83
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D59.00
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.83
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B32.81
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr10:57834157..57834247,%2B&oldid=877690"