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FFCP PHASE1:Mm9::chr4:115457601..115457657,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr4:115457601..115457657,+
|short_description=p1@Atpaf1
|description=CAGE_peak_1_at_Atpaf1_5end
|association_with_transcript=11bp_to_uc008ufj.2_5end
|EntrezGene=230649
|EntrezGene=230649
|HGNC=
|HGNC=
|UniProt=Q811I0
|UniProt=Q811I0
|association_with_transcript=11bp_to_uc008ufj.2_5end
|description=CAGE_peak_1_at_Atpaf1_5end
|id=chr4:115457601..115457657,+
|ontology_enrichment_disease=
|phase1_expression=8.16759120234449,5.23463111459042,5.45999087267443,6.0492842261366,7.01254021924886,4.53274034162102,4.20502753071946,6.84353614240354,3.66050677594334,3.7450324211519,5.30775701499065,5.82336760665956,8.56003649656029,6.55653018142481,1.33243904726265,3.23960427823721,1.39912375625629,6.30924330716475,5.89592064504677,5.94145512517242,7.39876624314307,6.95036658406197,8.097193463307,3.35984087866154,5.04700418347774,6.89078356938024,5.1691439539089,6.24866574789078,4.3705386474966,7.05684363327806,3.99114919179548,3.81018404075779,3.69038872550742,0,9.53210345179206,9.47537478543406,6.73758875665818,3.34825304589526,1.5626706890476,2.61761871986899,2.35292595212406,0.683045484958446,3.88408282424923,1.6366586336825,2.33166941804883,1.46837401729345,2.34717403304412,3.70642765846759,0.219686182734472,3.11087838518853,2.51975558925653,1.43752564364972,4.69791296961662,5.07753499407941,6.72187598284928,3.8588915405392,3.15186783932632,5.67239301505187,3.03474691289397,4.23192783417626,2.53532561402472,1.0165335962074,2.66788438833342,0.899899717281399,1.97773272513395,0.7104801149461,1.49800055259202,3.84218305321555,4.35496371695606,2.8351247049655,3.15487442027073,9.14083150092171,5.96345060569357,3.91970557487853,4.2172007248024,4.5960939330501,5.50579404996943,17.4931653176707,15.0534402591119,4.87979264601717,5.6722339033494,8.85552729946492,15.9134309430787,12.9435400307286,10.3902808488231,9.72274332063103,8.96941589034349,6.52398060388552,3.48340489332647,4.30757892608677,2.31891590961342,5.16254326188832,4.75979933595425,8.09554787456726,3.24888208723835,7.16843019355737,11.5164424508037,3.06774580640504,2.85764605063156,4.59341446863442,7.88723150749411,2.56652954828636,5.09610479413291,7.11066703153331,3.68034769719064,2.28023878927589,2.52762222507392,7.19358442230078,5.43769555659061,7.86743337043571,5.20455980298408,3.95805121805784,4.84292544237723,6.17962826265753,8.70156432804216,10.9329934456818,3.95511948374998,5.06097749219691,7.96149496754887,10.3530783966342,7.95029466457417,5.81850303762267,5.59175283654366,7.61230072230023,9.63454851341893,4.85368404896324,3.83408398418945,6.59893004092748,5.08280908292259,11.5338792341713,10.980014467647,6.03140890141749,12.3415267336516,16.6215047264715,12.6750707181332,13.7905073607594,5.90668310331835,5.349499736234,6.06534620240819,6.52369753248069,6.24578126220978,7.58676944630461,6.84236093260327,4.67184935290717,4.28629944653366,4.99643509110914,6.09061209638237,4.9153640440413,7.11374376678379,7.94245536704841,8.62160508403349,5.47989331068937,3.89266148915837,6.268538997399,4.7329891373827,6.96619933864726,4.91549231119264,3.86021860672073,6.81992398549422,7.87077935634907,8.67746421930056,10.2635375032778,6.8655973319711,12.0026181365916,10.0273623376796,13.9520366850245,12.8771232671817,16.8142093008724,16.455984991348,18.2225885127796,24.6449181019401,29.3861974724918,21.735461413814,29.7938249648025,11.7762371195911,4.73361216944708,7.26921322564356,8.99131926656051,6.18535926552179,5.57368012465052,5.54130083685001,5.64713868945359,5.55945109612176,7.03834816616469,5.21981967698963,6.75265714368445,5.02670417600539,6.36660710531683,6.04388670069272,6.29173586057955,6.48414149624083,9.35963984295526,4.74169752382704,6.28366819353509,2.25415471346161,4.68398054044223,5.43066964069352,9.74887896475428,8.28398636327771,10.3327103585722,13.1878931386755,12.9567022117891,6.22550516883013,3.00321190288969,3.14494392181125,2.9232074610031,3.44862206360455,4.82354319504834,4.32863948028414,7.19240343627027,4.21551589615092,4.66754402419738,7.18841032636773,5.58211421502755,8.11297950097858,6.06189307073068,7.89348619496414,7.71909634181387,3.69506380333209,8.52711352967181,5.86673915191293,4.07388205860452,3.05097322775053,3.85264392116176,3.09456733151818,5.65887578787617,5.35959489961049,8.19419351700467,5.42146213435456,4.42430949732493,5.69860440157455,4.48412081602686,0,1.08781136763742,2.45882136509518,3.86311444826625,16.5367107687426,17.3473296156461,6.55739781506702,23.4797962300067,8.20321370482267,4.29482618726302,4.95473814785438,4.77937595905104,3.56477878531831,1.98153571552183,4.04810701674894,5.84511715822624,3.95287777946523,13.1741739732941,4.25820255624806,5.1639025063504,8.1443479676788,4.94910368917606,0,3.8844901784797,3.02323556964751,3.39489143560617,3.83892460745005,4.61152721915891,5.68542244970086,7.63420831902762,8.55593708123331,7.26884543252377,7.37930260024991,7.21948802737308,3.40439605753788,5.58189391497062,5.43306471887569,4.92975180572662,3.90148514013002,4.99432689285798,6.2528627828806,5.17590413494819,5.16277757740163,5.50763384245932,3.52845436887939,4.78170133530292,3.06782410722221,5.54878909339034,5.72987251215055,5.0883678920969,6.70405924248657,17.0591277849669,3.07567585436135,4.74689796315412,4.25947412950337,1.88368457004691,2.7338845544205,4.80434163733698,4.07948231985253,4.47844647435706,5.38979897837253,5.72802370809068,4.4287039101359,6.50622294805916,4.75223499615926,3.76358932826044,4.58561383866973,4.45052343069908,5.70308844504818,7.0674104335688,7.90651337079936,6.83473244395618,3.38215763210514,7.47582730219894,7.94200754194069,5.05573089694524,3.61647505737647,5.57555214119568,6.68936260280798,5.7289929331338,5.24296722128554,5.31485065817213,6.33666013767304,3.79213344753814,6.48720688928525,5.13554785824136,7.40548690973432,5.54982756569192,5.36439657909415,6.49055427407832,5.61220203263393,6.76475214652589,6.70619898563999,6.75535440416831,4.38560463328886,7.21588812302471,6.42822961998629,14.964205318604,8.21348027484039,12.1113706422792,8.89788466729616,3.47741269257943,4.50437941082837,2.56412273974171,4.07299920250225,5.01572104035363,9.03602948187307,8.28585425712918,9.16632821503035,10.6548973053086,8.90607275701835,9.06472676867641,12.8254275044043,12.158672487054,9.9691329976525,11.39072685854,5.81209146471389,5.58634822761443,6.65861062441123,3.16038732188782,3.5634237646757,6.06683577885047,6.44515510624684,4.12070114477788,8.66481865897901,8.33900798820532,5.0695859978048,7.9223063382152,8.05316964240989,7.2988673741551,6.94969174362921,5.71552429539688,8.22778714208474,5.98018583437486,6.1812885120496,7.80154276712306,4.4573002810104,6.56660482789549,8.82213902805088,5.66851024866081,5.92889096616583,6.59993941555077,4.93905526756486,4.47218509444333,6.11118512306378,6.73370725989286,7.23673610557462,7.09232273104057,7.36615877705441,8.2116525828562,4.82266527452853,5.24602213669686,5.6143586026898,6.01638951335235,6.31251495827183,7.27951683094401,9.97031693167812
|phase1_expression=8.16759120234449,5.23463111459042,5.45999087267443,6.0492842261366,7.01254021924886,4.53274034162102,4.20502753071946,6.84353614240354,3.66050677594334,3.7450324211519,5.30775701499065,5.82336760665956,8.56003649656029,6.55653018142481,1.33243904726265,3.23960427823721,1.39912375625629,6.30924330716475,5.89592064504677,5.94145512517242,7.39876624314307,6.95036658406197,8.097193463307,3.35984087866154,5.04700418347774,6.89078356938024,5.1691439539089,6.24866574789078,4.3705386474966,7.05684363327806,3.99114919179548,3.81018404075779,3.69038872550742,0,9.53210345179206,9.47537478543406,6.73758875665818,3.34825304589526,1.5626706890476,2.61761871986899,2.35292595212406,0.683045484958446,3.88408282424923,1.6366586336825,2.33166941804883,1.46837401729345,2.34717403304412,3.70642765846759,0.219686182734472,3.11087838518853,2.51975558925653,1.43752564364972,4.69791296961662,5.07753499407941,6.72187598284928,3.8588915405392,3.15186783932632,5.67239301505187,3.03474691289397,4.23192783417626,2.53532561402472,1.0165335962074,2.66788438833342,0.899899717281399,1.97773272513395,0.7104801149461,1.49800055259202,3.84218305321555,4.35496371695606,2.8351247049655,3.15487442027073,9.14083150092171,5.96345060569357,3.91970557487853,4.2172007248024,4.5960939330501,5.50579404996943,17.4931653176707,15.0534402591119,4.87979264601717,5.6722339033494,8.85552729946492,15.9134309430787,12.9435400307286,10.3902808488231,9.72274332063103,8.96941589034349,6.52398060388552,3.48340489332647,4.30757892608677,2.31891590961342,5.16254326188832,4.75979933595425,8.09554787456726,3.24888208723835,7.16843019355737,11.5164424508037,3.06774580640504,2.85764605063156,4.59341446863442,7.88723150749411,2.56652954828636,5.09610479413291,7.11066703153331,3.68034769719064,2.28023878927589,2.52762222507392,7.19358442230078,5.43769555659061,7.86743337043571,5.20455980298408,3.95805121805784,4.84292544237723,6.17962826265753,8.70156432804216,10.9329934456818,3.95511948374998,5.06097749219691,7.96149496754887,10.3530783966342,7.95029466457417,5.81850303762267,5.59175283654366,7.61230072230023,9.63454851341893,4.85368404896324,3.83408398418945,6.59893004092748,5.08280908292259,11.5338792341713,10.980014467647,6.03140890141749,12.3415267336516,16.6215047264715,12.6750707181332,13.7905073607594,5.90668310331835,5.349499736234,6.06534620240819,6.52369753248069,6.24578126220978,7.58676944630461,6.84236093260327,4.67184935290717,4.28629944653366,4.99643509110914,6.09061209638237,4.9153640440413,7.11374376678379,7.94245536704841,8.62160508403349,5.47989331068937,3.89266148915837,6.268538997399,4.7329891373827,6.96619933864726,4.91549231119264,3.86021860672073,6.81992398549422,7.87077935634907,8.67746421930056,10.2635375032778,6.8655973319711,12.0026181365916,10.0273623376796,13.9520366850245,12.8771232671817,16.8142093008724,16.455984991348,18.2225885127796,24.6449181019401,29.3861974724918,21.735461413814,29.7938249648025,11.7762371195911,4.73361216944708,7.26921322564356,8.99131926656051,6.18535926552179,5.57368012465052,5.54130083685001,5.64713868945359,5.55945109612176,7.03834816616469,5.21981967698963,6.75265714368445,5.02670417600539,6.36660710531683,6.04388670069272,6.29173586057955,6.48414149624083,9.35963984295526,4.74169752382704,6.28366819353509,2.25415471346161,4.68398054044223,5.43066964069352,9.74887896475428,8.28398636327771,10.3327103585722,13.1878931386755,12.9567022117891,6.22550516883013,3.00321190288969,3.14494392181125,2.9232074610031,3.44862206360455,4.82354319504834,4.32863948028414,7.19240343627027,4.21551589615092,4.66754402419738,7.18841032636773,5.58211421502755,8.11297950097858,6.06189307073068,7.89348619496414,7.71909634181387,3.69506380333209,8.52711352967181,5.86673915191293,4.07388205860452,3.05097322775053,3.85264392116176,3.09456733151818,5.65887578787617,5.35959489961049,8.19419351700467,5.42146213435456,4.42430949732493,5.69860440157455,4.48412081602686,0,1.08781136763742,2.45882136509518,3.86311444826625,16.5367107687426,17.3473296156461,6.55739781506702,23.4797962300067,8.20321370482267,4.29482618726302,4.95473814785438,4.77937595905104,3.56477878531831,1.98153571552183,4.04810701674894,5.84511715822624,3.95287777946523,13.1741739732941,4.25820255624806,5.1639025063504,8.1443479676788,4.94910368917606,0,3.8844901784797,3.02323556964751,3.39489143560617,3.83892460745005,4.61152721915891,5.68542244970086,7.63420831902762,8.55593708123331,7.26884543252377,7.37930260024991,7.21948802737308,3.40439605753788,5.58189391497062,5.43306471887569,4.92975180572662,3.90148514013002,4.99432689285798,6.2528627828806,5.17590413494819,5.16277757740163,5.50763384245932,3.52845436887939,4.78170133530292,3.06782410722221,5.54878909339034,5.72987251215055,5.0883678920969,6.70405924248657,17.0591277849669,3.07567585436135,4.74689796315412,4.25947412950337,1.88368457004691,2.7338845544205,4.80434163733698,4.07948231985253,4.47844647435706,5.38979897837253,5.72802370809068,4.4287039101359,6.50622294805916,4.75223499615926,3.76358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|short_description=p1@Atpaf1
}}
}}

Revision as of 14:43, 18 April 2012

Short description:p1@Atpaf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Atpaf1_5end
Coexpression cluster:NA
Association with transcript: 11bp_to_uc008ufj.2_5end
EntrezGene:Atpaf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Atpaf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.31
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.82
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E48.56
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.56
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.24
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.90
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.94
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.10
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I26.25
Ileum epithelium, pool1.CNhs13199.10252-104B94.37
Ileum epithelium, pool2.CNhs13232.10253-104C17.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.81
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F59.53
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F69.48
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.35
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H32.62
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.52
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.70
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A16.72
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C33.03
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.15
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.22
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.05
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.67
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E512.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.39
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.72
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.97
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.52
Mouse Schwann, donor1.CNhs12507.11728-123D93.48
Mouse Schwann, donor2.CNhs12573.11746-123F94.31
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A711.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.19
accessory axillary lymph node, adult.CNhs10475.1063-29H95.44
adrenal gland, adult.CNhs10508.49-24D77.87
adrenal gland, embryo E14.CNhs11038.406-44C55.20
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I14.84
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C18.70
adrenal gland, neonate N25.CNhs11223.1377-27I310.93
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G27.96
bone (os femoris), neonate N02.CNhs11227.1985-43F510.35
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C35.82
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I29.63
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.08
corpora quadrigemina, adult.CNhs10501.16-22A411.53
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D512.34
cortex, neonate N30.CNhs11107.1392-42F216.62
diencephalon, adult.CNhs10482.20-12F212.68
diencephalon, neonate N30.CNhs11201.1388-42B213.79
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C66.25
eyeball, embryo E14.CNhs10521.399-16E27.59
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C64.29
eyeball, neonate N01.CNhs11140.1532-43E75.00
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A24.92
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H27.94
forelimb, embryo E13.CNhs10589.384-1E28.62
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C46.27
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I66.97
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I910.26
heart, embryo E14.CNhs10597.403-26D46.87
heart, embryo E15.CNhs11017.431-16C812.00
heart, embryo E16.CNhs11021.457-17C610.03
heart, embryo E17.CNhs11025.479-18E513.95
heart, embryo E18.CNhs11030.1283-20G312.88
heart, neonate N00.CNhs11213.639-21E316.81
heart, neonate N03.CNhs11221.1349-25I216.46
heart, neonate N10.CNhs11118.749-24G118.22
heart, neonate N16.CNhs11209.782-15G124.64
heart, neonate N20.CNhs11127.821-26I629.39
heart, neonate N25.CNhs11196.1351-25D321.74
heart, neonate N30.CNhs11202.1390-42D229.79
hippocampus, adult.CNhs10478.13-16E811.78
hippocampus, neonate N00.CNhs11228.627-43G14.73
intestinal mucosa, adult.CNhs10506.860-29I37.27
intestine, adult.CNhs10496.178-9A38.99
intestine, embryo E12.CNhs11019.1251-16I56.19
intestine, embryo E13.CNhs11010.381-16D55.57
intestine, embryo E15.CNhs10602.976-16D85.54
intestine, embryo E16.CNhs10585.463-22H45.65
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F77.04
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B85.03
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A56.04
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G19.36
kidney, embryo E14.CNhs10606.411-4I94.74
kidney, embryo E15.CNhs10997.434-16F86.28
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C75.43
kidney, neonate N00.CNhs11214.646-21G79.75
kidney, neonate N10.CNhs11206.758-6D58.28
kidney, neonate N20.CNhs11113.832-19I110.33
kidney, neonate N25.CNhs11122.1353-25F313.19
kidney, neonate N30.CNhs11203.1385-42H112.96
liver, adult pregnant day01.CNhs10466.508-5B26.23
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F54.82
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A36.06
liver, neonate N25.CNhs11198.1368-26H17.89
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G28.53
lung, embryo E14.CNhs10604.404-26F85.87
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A63.85
lung, embryo E18.CNhs10583.1287-20I63.09
lung, neonate N00.CNhs11224.640-42C65.66
lung, neonate N06.CNhs11212.683-20E55.36
lung, neonate N07.CNhs11111.715-19A38.19
lung, neonate N10.CNhs11219.750-23E65.42
lung, neonate N20.CNhs11109.822-18A44.42
lung, neonate N25.CNhs11119.1359-25C75.70
lung, neonate N30.CNhs11133.1394-42H24.48
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H23.86
medulla oblongata, adult.CNhs10477.17-12C216.54
medulla oblongata, neonate N30.CNhs11200.1396-42A317.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.56
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C223.48
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E24.29
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.95
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.78
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.85
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I913.17
ovary, adult.CNhs10507.91-2I74.26
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I48.14
oviduct, adult pregnant day01.CNhs10500.988-6G64.95
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G33.84
pancreas, embryo E18.CNhs10580.1535-43I74.61
pancreas, neonate N00.CNhs11105.645-26G95.69
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E65.58
pituitary gland, embryo E13.CNhs11009.370-44C75.43
pituitary gland, embryo E14.CNhs11037.398-44A54.93
pituitary gland, embryo E15.CNhs10592.427-16B93.90
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E95.18
placenta, adult pregnant day10.CNhs10472.539-13I75.16
placenta, adult pregnant day17.CNhs10464.577-18G35.51
prostate, adult.CNhs10470.859-1F83.53
skin, adult.CNhs10492.30-1C34.78
skin, neonate N00.CNhs11124.650-25G43.07
skin, neonate N03.CNhs11215.662-22H35.55
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C45.09
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C917.06
spleen, adult.CNhs10465.25-2G23.08
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G34.80
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.08
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.48
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.39
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G86.51
stomach, embryo E16.CNhs11022.459-17D44.75
stomach, embryo E17.CNhs11006.1035-18D53.76
stomach, embryo E18.CNhs10999.1286-20C64.59
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A95.70
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I17.91
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F57.48
testis, embryo E15.CNhs11034.443-27C57.94
testis, embryo E16.CNhs11033.470-26G55.06
testis, embryo E17.CNhs11029.486-18I53.62
testis, embryo E18.CNhs11027.503-18G55.58
testis, neonate N00.CNhs11189.1300-22B76.69
testis, neonate N07.CNhs11222.726-26I45.73
testis, neonate N10.CNhs11204.763-44D95.24
testis, neonate N20.CNhs11110.839-18H35.31
testis, neonate N30.CNhs11130.1391-42E26.34
thymus, adult.CNhs10471.38-12B53.79
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C15.55
thymus, embryo E18.CNhs10595.1273-19G45.36
thymus, neonate N02.CNhs11181.1541-43F86.49
thymus, neonate N03.CNhs11137.2104-43C75.61
thymus, neonate N06.CNhs11197.681-26C46.76
thymus, neonate N07.CNhs11211.713-19D36.71
thymus, neonate N10.CNhs11194.748-24E46.76
thymus, neonate N20.CNhs11186.820-7A24.39
thymus, neonate N25.CNhs11125.1362-25G77.22
thymus, neonate N30.CNhs11132.1393-42G26.43
tongue, adult.CNhs10499.32-1B414.96
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.21
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.11
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G58.90
urinary bladder, adult.CNhs10481.879-12E43.48
uterus, adult pregnant day19.CNhs10497.590-15F54.50
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D54.07
vesicular gland, adult.CNhs10491.51-27F85.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A612.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A712.16
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.97
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.39
whole body, embryo E11.CNhs11014.324-5I85.81
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H26.66
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B13.56
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G55.67
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.93
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.21
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I55.25
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C26.02
whole body, neonate N01.CNhs10576.659-23C66.31
whole body, neonate N06.CNhs10515.692-21D17.28
whole body, neonate N10.CNhs10518.761-6B49.97





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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