Personal tools

FFCP PHASE1:Mm9::chr4:128560793..128560855,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:128560793..128560855,+
|short_description=p1@Trim62
|description=CAGE_peak_1_at_Trim62_5end
|association_with_transcript=0bp_to_ENSMUST00000035667,ENSMUST00000147852_5end
|EntrezGene=67525
|EntrezGene=67525
|HGNC=
|HGNC=
|UniProt=Q80V85,D6RJM1
|UniProt=Q80V85,D6RJM1
|association_with_transcript=0bp_to_ENSMUST00000035667,ENSMUST00000147852_5end
|description=CAGE_peak_1_at_Trim62_5end
|id=chr4:128560793..128560855,+
|ontology_enrichment_disease=
|phase1_expression=24.9832201483479,5.58360652222978,9.55498402718026,2.11724947914781,1.50268718983904,7.89032577985882,7.94282978024787,4.26106967357202,5.91312633037,7.2560003159818,0.171217968225505,1.11681022593471,5.30722262786738,5.24522414513984,1.99865857089398,0.404950534779652,0.699561878128147,1.73504190947031,1.7824876368746,0.84877930359606,11.2257142999412,1.29078236561151,0.522399578277871,3.51983330145495,2.52350209173887,6.31655160526522,5.1691439539089,5.60225204983311,3.99049180858385,3.2763916868791,4.21287970245079,0,0,0,0.866554859253824,1.32987716286794,1.02084678131185,0,1.5626706890476,0,0,0,0.971020706062307,3.52511090331616,3.64956952390252,1.28482726513177,20.342174953049,6.97680500417429,13.4008571468028,10.8880743481599,9.93903593540074,15.8127820801469,1.00669563634642,9.42970784614748,8.06625117941913,2.82985379639542,5.44413535883638,3.6097046459421,27.5150386769053,21.1596391708813,27.8885817542719,13.2149367506962,6.22506357277798,9.44894703145469,9.88866362566974,14.209602298922,23.3688086204356,19.9793518767208,4.66603255388149,4.72520784160917,4.41682418837902,45.7041575046086,36.001572175113,8.32937434661688,10.1596199279331,9.19218786610021,20.9220173898839,14.6840438797966,12.595735727012,19.6510568717989,16.9252140664458,13.5437476344758,28.4766658981409,14.6318278608237,15.279824777681,50.6761167014708,34.4539467533829,31.5015063444758,5.37655972665607,9.29530189313462,19.1310562543107,4.30211938490693,0.679971333707751,0.539703191637817,1.29955283489534,1.79210754838934,4.21333260395256,1.36344258062446,1.29893002301434,0.35333957451034,16.9012103732017,2.56652954828636,10.1922095882658,42.6640021891999,4.76280290224671,7.34743609877786,4.54972000513305,4.5673551887624,4.40194402200192,9.35185476108396,12.6644288539279,14.9188084372949,11.5307748628029,8.89263579260473,21.6363221129697,11.6869929936598,3.95511948374998,2.02439099687876,2.65383165584962,4.20593809863264,4.41683036920787,0.484875253135222,1.86391761218122,139.070878580485,271.652378737051,3.0654846625031,0.718890747035522,0,0.508280908292259,15.5782264981016,9.15001205637253,20.7329680986226,11.8200537730748,10.4843337505436,14.9607392082883,13.3037835715561,10.1839363850316,4.22983700074316,2.52722758433675,4.62972082950243,10.4096354370163,7.81667155073808,8.28285797104606,5.87748789559289,9.11689088627793,7.81493693737584,8.15205003669641,6.98499100995342,14.4430555265004,11.1572587299013,10.5570674498369,8.54863356467542,6.11703948296315,7.3132954969655,9.26019613835746,26.0734889532226,2.1066395619397,0.257347907114715,0.568326998791185,7.45652781127807,5.62862543954631,3.6012412292203,4.7348947117042,3.54175617145327,3.5481435964097,1.62773761325285,1.87791380979733,2.21854150497622,2.63295759861569,2.62667942526552,3.4859588104718,3.07019973593198,1.09775057645525,5.36825675041487,7.57043814830858,15.9502149187891,4.62586296177317,3.17340679996253,9.38468302355029,8.12828351511535,6.05677068213839,4.84040459096022,3.33567065767305,4.56541502670142,5.21981967698963,3.95277491337626,6.78605063760728,5.76973768919337,6.82374304916921,2.69645822596266,4.32276099749388,6.57166201739412,14.2250925714811,6.28366819353509,11.270773567308,8.34970444165788,7.5641469995374,10.1696938840962,8.22074982615345,4.28069429140846,3.61097074035162,5.67626954040282,1.48226313543574,2.33583148002532,2.16214894624523,0.899448449539415,0.811440485554012,0.964708639009667,0.763877555344259,1.15078454980324,2.10775794807546,1.09824565275233,5.75072826109418,1.86070473834252,2.18426371180192,3.03094653536534,1.07638448113147,6.27176577772377,13.4869828821621,7.20067364727842,6.68156403412306,6.28056817368196,5.16318546234705,7.03526281255626,5.47500374037832,12.2934198150413,11.0344600874334,14.3952048271704,11.799652880654,9.01248230936559,10.0157289482219,20.1062191428301,4.52373851817817,3.26343410291226,6.88469982226651,7.17435540392304,11.559642479121,13.9481907044722,2.13115428989678,3.02965112645248,23.0321000173867,19.9123759591286,18.9572590004863,20.3123478259669,19.3834846451683,26.3261173633614,19.02610297872,16.6585839009448,17.7879500075936,27.3123118958536,10.7874464758284,12.1084610493734,14.1711654637611,9.56826713240706,2.65490276679926,7.76898035695941,5.74414758233027,5.28094223316515,7.08724542913855,7.37844355065426,6.20227903603731,6.90714086007261,9.9819265947722,5.05658812697306,3.16255825724996,4.12542172992747,5.44703369206061,12.2441543941291,12.8065096944927,13.9319072770535,14.7192393923087,12.3074484145429,9.21474515371877,13.700922710157,11.0295702789944,11.6507638975101,21.1707262132763,17.8077153176798,15.1776561094151,11.3388298864933,13.130957840345,18.3837807714469,9.91034844541493,11.3109434226411,2.22132145037209,7.63631411463923,3.70389054739423,0.941842285023455,1.77702496037333,3.43167259809784,1.69978429993855,2.23922323717853,2.07299960706636,6.68269432610579,13.6024477239888,5.89626454667861,2.91614420218863,6.48173717644853,5.45906409365444,6.74321731924104,7.10819719237889,5.49687478166462,5.70305882483889,75.182056883518,8.45539408026285,35.7344545045109,33.0916980914195,44.918224507475,45.4642578641613,54.5728285335213,76.5169195970316,64.5813748825992,26.6342734841306,4.83168241652012,2.59227005632079,4.10814456816632,3.44632865993279,2.36235201479103,0.77952493786677,1.25318686967237,2.58285761215644,1.9231271923195,1.77227432609493,1.81739609906666,2.362411006305,2.21817607301049,2.72882066071307,2.5977197242889,3.74006086981021,11.789979947991,8.65745218158852,3.05027112472217,7.21903850365537,32.455851797408,7.50729901804728,7.14291334642334,21.4368379079066,14.5455910170255,7.90652579663893,6.44455331110048,10.3121192419091,8.248952752497,7.53590771747707,7.55393897389701,8.10027000278167,4.95353323546643,6.79713613476307,9.31968561153276,10.7938841487544,12.369771075432,10.9269507682646,10.2104821168684,8.59413966774727,8.45680138870065,7.3341420174533,9.27157757575024,4.49286893428541,4.54854981174835,5.32306529769503,7.73367999682912,7.39767909012071,7.23484222175023,6.37533705407307,9.52587382566147,7.18482820858104,8.48800570040302,7.00546031365621,6.18235464564469,3.08582327146874,3.54951612318675,4.76872379894642,8.28474574804273,4.79957840118186,5.58456412085065,6.76833499629258,5.78753365163254,6.11118512306378,6.73370725989286,7.23673610557462,6.99381824866501,4.50154147486658,6.50734732981057,9.45242393807593,13.4897712086491,4.44470056046276,9.88406848622172,9.56441660344217,5.07360263974886,3.47801753430632
|phase1_expression=24.9832201483479,5.58360652222978,9.55498402718026,2.11724947914781,1.50268718983904,7.89032577985882,7.94282978024787,4.26106967357202,5.91312633037,7.2560003159818,0.171217968225505,1.11681022593471,5.30722262786738,5.24522414513984,1.99865857089398,0.404950534779652,0.699561878128147,1.73504190947031,1.7824876368746,0.84877930359606,11.2257142999412,1.29078236561151,0.522399578277871,3.51983330145495,2.52350209173887,6.31655160526522,5.1691439539089,5.60225204983311,3.99049180858385,3.2763916868791,4.21287970245079,0,0,0,0.866554859253824,1.32987716286794,1.02084678131185,0,1.5626706890476,0,0,0,0.971020706062307,3.52511090331616,3.64956952390252,1.28482726513177,20.342174953049,6.97680500417429,13.4008571468028,10.8880743481599,9.93903593540074,15.8127820801469,1.00669563634642,9.42970784614748,8.06625117941913,2.82985379639542,5.44413535883638,3.6097046459421,27.5150386769053,21.1596391708813,27.8885817542719,13.2149367506962,6.22506357277798,9.44894703145469,9.88866362566974,14.209602298922,23.3688086204356,19.9793518767208,4.66603255388149,4.72520784160917,4.41682418837902,45.7041575046086,36.001572175113,8.32937434661688,10.1596199279331,9.19218786610021,20.9220173898839,14.6840438797966,12.595735727012,19.6510568717989,16.9252140664458,13.5437476344758,28.4766658981409,14.6318278608237,15.279824777681,50.6761167014708,34.4539467533829,31.5015063444758,5.37655972665607,9.29530189313462,19.1310562543107,4.30211938490693,0.679971333707751,0.539703191637817,1.29955283489534,1.79210754838934,4.21333260395256,1.36344258062446,1.29893002301434,0.35333957451034,16.9012103732017,2.56652954828636,10.1922095882658,42.6640021891999,4.76280290224671,7.34743609877786,4.54972000513305,4.5673551887624,4.40194402200192,9.35185476108396,12.6644288539279,14.9188084372949,11.5307748628029,8.89263579260473,21.6363221129697,11.6869929936598,3.95511948374998,2.02439099687876,2.65383165584962,4.20593809863264,4.41683036920787,0.484875253135222,1.86391761218122,139.070878580485,271.652378737051,3.0654846625031,0.718890747035522,0,0.508280908292259,15.5782264981016,9.15001205637253,20.7329680986226,11.8200537730748,10.4843337505436,14.9607392082883,13.3037835715561,10.1839363850316,4.22983700074316,2.52722758433675,4.62972082950243,10.4096354370163,7.81667155073808,8.28285797104606,5.87748789559289,9.11689088627793,7.81493693737584,8.15205003669641,6.98499100995342,14.4430555265004,11.1572587299013,10.5570674498369,8.54863356467542,6.11703948296315,7.3132954969655,9.26019613835746,26.0734889532226,2.1066395619397,0.257347907114715,0.568326998791185,7.45652781127807,5.62862543954631,3.6012412292203,4.7348947117042,3.54175617145327,3.5481435964097,1.62773761325285,1.87791380979733,2.21854150497622,2.63295759861569,2.62667942526552,3.4859588104718,3.07019973593198,1.09775057645525,5.36825675041487,7.57043814830858,15.9502149187891,4.62586296177317,3.17340679996253,9.38468302355029,8.12828351511535,6.05677068213839,4.84040459096022,3.33567065767305,4.56541502670142,5.21981967698963,3.95277491337626,6.78605063760728,5.76973768919337,6.82374304916921,2.69645822596266,4.32276099749388,6.57166201739412,14.2250925714811,6.28366819353509,11.270773567308,8.34970444165788,7.5641469995374,10.1696938840962,8.22074982615345,4.28069429140846,3.61097074035162,5.67626954040282,1.48226313543574,2.33583148002532,2.16214894624523,0.899448449539415,0.811440485554012,0.964708639009667,0.763877555344259,1.15078454980324,2.10775794807546,1.09824565275233,5.75072826109418,1.86070473834252,2.18426371180192,3.03094653536534,1.07638448113147,6.27176577772377,13.4869828821621,7.20067364727842,6.68156403412306,6.28056817368196,5.16318546234705,7.03526281255626,5.47500374037832,12.2934198150413,11.0344600874334,14.3952048271704,11.799652880654,9.01248230936559,10.0157289482219,20.1062191428301,4.52373851817817,3.26343410291226,6.88469982226651,7.17435540392304,11.559642479121,13.9481907044722,2.13115428989678,3.02965112645248,23.0321000173867,19.9123759591286,18.9572590004863,20.3123478259669,19.3834846451683,26.3261173633614,19.02610297872,16.6585839009448,17.7879500075936,27.3123118958536,10.7874464758284,12.1084610493734,14.1711654637611,9.56826713240706,2.65490276679926,7.76898035695941,5.74414758233027,5.28094223316515,7.08724542913855,7.37844355065426,6.20227903603731,6.90714086007261,9.9819265947722,5.05658812697306,3.16255825724996,4.12542172992747,5.44703369206061,12.2441543941291,12.8065096944927,13.9319072770535,14.7192393923087,12.3074484145429,9.21474515371877,13.700922710157,11.0295702789944,11.6507638975101,21.1707262132763,17.8077153176798,15.1776561094151,11.3388298864933,13.130957840345,18.3837807714469,9.91034844541493,11.3109434226411,2.22132145037209,7.63631411463923,3.70389054739423,0.941842285023455,1.77702496037333,3.43167259809784,1.69978429993855,2.23922323717853,2.07299960706636,6.68269432610579,13.6024477239888,5.89626454667861,2.91614420218863,6.48173717644853,5.45906409365444,6.74321731924104,7.10819719237889,5.49687478166462,5.70305882483889,75.182056883518,8.45539408026285,35.7344545045109,33.0916980914195,44.918224507475,45.4642578641613,54.5728285335213,76.5169195970316,64.5813748825992,26.6342734841306,4.83168241652012,2.59227005632079,4.10814456816632,3.44632865993279,2.36235201479103,0.77952493786677,1.25318686967237,2.58285761215644,1.9231271923195,1.77227432609493,1.81739609906666,2.362411006305,2.21817607301049,2.72882066071307,2.5977197242889,3.74006086981021,11.789979947991,8.65745218158852,3.05027112472217,7.21903850365537,32.455851797408,7.50729901804728,7.14291334642334,21.4368379079066,14.5455910170255,7.90652579663893,6.44455331110048,10.3121192419091,8.248952752497,7.53590771747707,7.55393897389701,8.10027000278167,4.95353323546643,6.79713613476307,9.31968561153276,10.7938841487544,12.369771075432,10.9269507682646,10.2104821168684,8.59413966774727,8.45680138870065,7.3341420174533,9.27157757575024,4.49286893428541,4.54854981174835,5.32306529769503,7.73367999682912,7.39767909012071,7.23484222175023,6.37533705407307,9.52587382566147,7.18482820858104,8.48800570040302,7.00546031365621,6.18235464564469,3.08582327146874,3.54951612318675,4.76872379894642,8.28474574804273,4.79957840118186,5.58456412085065,6.76833499629258,5.78753365163254,6.11118512306378,6.73370725989286,7.23673610557462,6.99381824866501,4.50154147486658,6.50734732981057,9.45242393807593,13.4897712086491,4.44470056046276,9.88406848622172,9.56441660344217,5.07360263974886,3.47801753430632
|short_description=p1@Trim62
}}
}}

Revision as of 15:00, 18 April 2012

Short description:p1@Trim62
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim62_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000035667, ENSMUST00000147852_5end
EntrezGene:Trim62
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim62

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G724.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I69.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.91
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.26
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.12
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.31
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E85.25
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.78
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.52
GP2+ M cell, pool1.CNhs13228.11845-124H96.32
GP2+ M cell, pool2.CNhs13231.11846-124I15.17
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B93.99
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.21
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.65
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.28
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B720.34
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C26.98
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B813.40
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.89
Mouse Astrocytes, donor2.CNhs12078.11552-120C49.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.44
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.61
Mouse Granule cells, donor1.CNhs12131.11713-123C327.52
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C613.21
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C823.37
Mouse Microglia, donor2.CNhs12634.11736-123E819.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.67
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.73
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D536.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.16
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D320.92
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D712.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D419.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E428.48
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.28
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D650.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F634.45
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E131.50
Mouse Schwann, donor1.CNhs12507.11728-123D95.38
Mouse Schwann, donor2.CNhs12573.11746-123F99.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G319.13
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.35
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.57
accessory axillary lymph node, adult.CNhs10475.1063-29H94.40
adrenal gland, adult.CNhs10508.49-24D79.35
adrenal gland, embryo E14.CNhs11038.406-44C512.66
adrenal gland, embryo E16.CNhs11004.1254-43D614.92
adrenal gland, embryo E17.CNhs11043.1263-45I111.53
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C121.64
adrenal gland, neonate N25.CNhs11223.1377-27I311.69
amnion, adult pregnant day17.5.CNhs10488.583-22A83.96
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A64.42
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B2139.07
cerebellum, neonate N30.CNhs11135.1395-42I2271.65
colon, adult.CNhs10468.36-18H73.07
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A415.58
corpus striatum, adult.CNhs10487.19-21D89.15
corpus striatum, neonate N00.CNhs11226.630-43F120.73
cortex, adult.CNhs10473.12-14D511.82
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F214.96
diencephalon, neonate N30.CNhs11201.1388-42B213.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.23
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C610.41
eyeball, embryo E14.CNhs10521.399-16E27.82
eyeball, embryo E15.CNhs10593.426-16C98.28
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C69.12
eyeball, neonate N01.CNhs11140.1532-43E77.81
eyeball, neonate N02.CNhs11205.1551-44G88.15
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E214.44
forelimb, embryo E12.CNhs10600.359-14H211.16
forelimb, embryo E13.CNhs10589.384-1E210.56
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E76.12
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B59.26
gonad, embryo E13.CNhs11044.1564-45I626.07
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E97.46
heart, embryo E12.CNhs11015.353-12F55.63
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C63.55
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G13.49
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D25.37
hippocampus, adult.CNhs10478.13-16E87.57
hippocampus, neonate N00.CNhs11228.627-43G115.95
intestinal mucosa, adult.CNhs10506.860-29I34.63
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I59.38
intestine, embryo E13.CNhs11010.381-16D58.13
intestine, embryo E15.CNhs10602.976-16D86.06
intestine, embryo E16.CNhs10585.463-22H44.84
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E93.95
intestine, neonate N06.CNhs11102.688-20B86.79
intestine, neonate N07.CNhs11095.720-20F25.77
intestine, neonate N10.CNhs11098.755-23A56.82
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G16.57
kidney, embryo E14.CNhs10606.411-4I914.23
kidney, embryo E15.CNhs10997.434-16F86.28
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I28.35
kidney, embryo E18.CNhs11001.1288-20C77.56
kidney, neonate N00.CNhs11214.646-21G710.17
kidney, neonate N10.CNhs11206.758-6D58.22
kidney, neonate N20.CNhs11113.832-19I14.28
kidney, neonate N25.CNhs11122.1353-25F33.61
kidney, neonate N30.CNhs11203.1385-42H15.68
liver, adult pregnant day01.CNhs10466.508-5B21.48
liver, embryo E12.CNhs10601.355-15F82.34
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.11
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.08
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B113.49
lung, embryo E12.CNhs10522.354-16G27.20
lung, embryo E14.CNhs10604.404-26F86.68
lung, embryo E15.CNhs11020.432-17C56.28
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A67.04
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C612.29
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A314.40
lung, neonate N10.CNhs11219.750-23E611.80
lung, neonate N20.CNhs11109.822-18A49.01
lung, neonate N25.CNhs11119.1359-25C710.02
lung, neonate N30.CNhs11133.1394-42H220.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C211.56
medulla oblongata, neonate N30.CNhs11200.1396-42A313.95
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.03
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.91
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E318.96
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.31
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.38
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.66
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.79
olfactory brain, adult.CNhs10489.18-22I927.31
ovary, adult.CNhs10507.91-2I710.79
ovary, embryo E18.CNhs11040.505-44H712.11
ovary, neonate N00.CNhs11217.1299-22I414.17
oviduct, adult pregnant day01.CNhs10500.988-6G69.57
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E55.28
pancreas, embryo E17.CNhs10599.1558-45G37.09
pancreas, embryo E18.CNhs10580.1535-43I77.38
pancreas, neonate N00.CNhs11105.645-26G96.20
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B65.06
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E612.24
pituitary gland, embryo E13.CNhs11009.370-44C712.81
pituitary gland, embryo E14.CNhs11037.398-44A513.93
pituitary gland, embryo E15.CNhs10592.427-16B914.72
pituitary gland, embryo E16.CNhs11036.449-43F612.31
pituitary gland, embryo E17.CNhs11039.1265-44F59.21
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I711.03
placenta, adult pregnant day17.CNhs10464.577-18G311.65
prostate, adult.CNhs10470.859-1F821.17
skin, adult.CNhs10492.30-1C317.81
skin, neonate N00.CNhs11124.650-25G415.18
skin, neonate N03.CNhs11215.662-22H311.34
skin, neonate N06.CNhs11097.693-20I513.13
skin, neonate N10.CNhs11108.762-6C418.38
small intestine, neonate N16.CNhs11114.790-21I19.91
spinal cord, adult.CNhs10505.24-13C911.31
spleen, adult.CNhs10465.25-2G22.22
spleen, embryo E16.CNhs11035.461-43C17.64
spleen, embryo E18.CNhs11011.1271-21F23.70
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.78
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G85.90
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C65.46
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A97.11
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I15.70
submandibular gland, adult.CNhs10469.59-29C175.18
testis, adult.CNhs10504.57-7G58.46
testis, embryo E13.CNhs11031.389-23F535.73
testis, embryo E15.CNhs11034.443-27C533.09
testis, embryo E16.CNhs11033.470-26G544.92
testis, embryo E17.CNhs11029.486-18I545.46
testis, embryo E18.CNhs11027.503-18G554.57
testis, neonate N00.CNhs11189.1300-22B776.52
testis, neonate N07.CNhs11222.726-26I464.58
testis, neonate N10.CNhs11204.763-44D926.63
testis, neonate N20.CNhs11110.839-18H34.83
testis, neonate N30.CNhs11130.1391-42E22.59
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G42.58
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C41.82
thymus, neonate N07.CNhs11211.713-19D32.36
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B411.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.22
urinary bladder, adult.CNhs10481.879-12E432.46
uterus, adult pregnant day19.CNhs10497.590-15F57.51
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D521.44
vesicular gland, adult.CNhs10491.51-27F814.55
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.31
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.25
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A99.32
whole body, embryo E11.CNhs11014.324-5I810.79
whole body, embryo E12.CNhs10587.857-27C912.37
whole body, embryo E13.CNhs10512.372-23H210.93
whole body, embryo E14.5.CNhs10578.420-27D210.21
whole body, embryo E14.CNhs10519.395-14B18.59
whole body, embryo E16.CNhs10514.453-14F28.46
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.40
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.18
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.01
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F99.45
whole body, embryo E17.CNhs10517.475-3I513.49
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C29.88
whole body, neonate N01.CNhs10576.659-23C69.56
whole body, neonate N06.CNhs10515.692-21D15.07
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:128560793..128560855,%2B&oldid=899648"