Personal tools

FFCP PHASE1:Mm9::chr7:120657368..120657423,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr7:120657368..120657423,+
|short_description=p1@Far1
|description=CAGE_peak_1_at_Far1_5end
|association_with_transcript=0bp_to_ENSMUST00000067929,ENSMUST00000123845,ENSMUST00000129087,ENSMUST00000136158,ENSMUST00000156554,ENSMUST00000164745,NM_026143,NM_027379,uc009jhn.1,uc009jho.1,uc009jhp.1,uc009jhq.1_5end
|EntrezGene=67420
|EntrezGene=67420
|HGNC=
|HGNC=
|UniProt=Q922J9,D3Z5W6,D3Z4N9
|UniProt=Q922J9,D3Z5W6,D3Z4N9
|association_with_transcript=0bp_to_ENSMUST00000067929,ENSMUST00000123845,ENSMUST00000129087,ENSMUST00000136158,ENSMUST00000156554,ENSMUST00000164745,NM_026143,NM_027379,uc009jhn.1,uc009jho.1,uc009jhp.1,uc009jhq.1_5end
|description=CAGE_peak_1_at_Far1_5end
|id=chr7:120657368..120657423,+
|ontology_enrichment_disease=
|phase1_expression=57.9738826519354,1.04692622291808,0,0,0,2.35030980676646,2.56973904655078,41.3194635013044,90.1047821770667,78.4116163178678,67.117443544398,61.0257016314324,25.1665072998872,25.4393371039282,34.9765249906446,55.883173799592,37.7763414189199,111.0426822061,114.353437627186,84.877930359606,39.9703463710028,36.6383609931267,56.1579546648711,16.1592347021341,12.15869189656,0,0,1.07735616342945,2.85035129184561,3.2763916868791,3.76941868114018,17.14582818341,12.3012957516914,0,3.17736781726402,3.15845826181135,3.67504841272264,243.166877458143,161.736416316427,264.903014450742,304.115679312034,288.928240137423,264.117632048948,29.9634426781874,30.6158332282934,48.6398893228456,4.69434806608824,2.39827672018491,3.51497892375155,4.27745777963423,3.91961980551015,4.31257693094915,127.346997997822,39.1695556686126,34.9537551108163,32.1574295044934,22.349608315223,25.7836046138721,9.3065571995415,10.0508286061686,3.80298842103708,4.74382344896785,6.22506357277798,2.2497492932035,3.9554654502679,4.2628806896766,2.99600110518405,5.76327457982332,14.6202353354953,8.50537411489651,10.0955981448663,11.4260393761521,14.1355866209033,11.3916443269907,8.81778333367775,3.67687514644008,22.0231761998777,40.8599481872601,45.3139273105918,9.62769900430415,12.7167824607349,17.1901412283731,27.080750903134,31.5147061617741,38.1995619442025,31.8198872311561,38.2979821349587,19.7583412574819,69.2894668998634,65.2182563721559,33.3344162006929,14.6272059086836,0,1.07940638327563,2.59910566979068,1.34408066129201,31.7404389497759,79.761390966531,48.5799828607365,42.4007489412408,156.899569631222,51.3305909657271,53.5091003383956,42.6640021891999,66.0297675084203,61.566447310449,46.0027244963453,46.4728390456574,159.246798443011,30.8759649254836,23.9409750937267,27.4018930480927,24.6758582063983,30.747418672735,27.6333461768906,19.2269884734403,14.3373081285937,27.3292784578633,68.1150125001403,29.6033335403759,35.334642953663,43.63877278217,93.1958806090611,40.4037499875935,42.0987880695045,10.4737392635522,51.4006884130398,23.9961092397363,49.4303183314222,38.1966130482298,48.952564501593,24.2512899577828,53.7117149394134,60.8602788446187,43.6354893575076,47.8611726049885,35.3382592560598,47.7722767142757,56.3571751307095,673.20349698083,38.7758920028857,29.657371471918,40.8741034658143,43.5536923545217,38.7127680171056,43.5586648968489,35.1381467098983,115.381703349601,19.185551371023,47.087413961787,41.348514178528,34.8521214559844,45.0436543745469,44.5762773148373,45.4778521461555,37.2194078950582,23.87524836865,27.5362260612745,44.8978329045036,35.6256328761063,37.5241695969754,35.4722261078199,40.0098603139005,30.8919843843424,36.8698399800834,33.7174219888091,23.0715125203672,24.6374872394728,26.1650161362434,35.6243397051637,24.0774364351192,24.5615978874558,23.4918623361424,17.9836601138898,52.9930670381601,28.7103868538204,3.96502539580558,5.81791246659797,41.3779206038354,42.2670742785998,34.536479634321,26.8239087749046,23.7944506914011,22.446623881282,15.1849299694244,15.481701744057,17.3421294072186,18.9008648439093,23.2007263671753,13.4822911298133,29.1786367330837,24.6935178835415,13.6560888686219,47.4131327330375,51.845558409617,60.891747025749,68.8531329445071,51.6199634392745,79.1089079424459,103.179493437742,116.650054786141,72.6809295499405,2.66807364378434,29.3647386060326,28.107936301188,24.9596944747188,27.1832562660594,22.1882986972223,24.9533334745791,25.3172600956713,19.7804976665543,18.1210532704134,24.4405951096503,15.2577788544086,18.4102227137591,8.84026072814891,5.74071723270119,5.30687873499704,50.6223741056497,42.2565848248181,41.5560689927166,38.5321344709677,40.1320324573339,43.3841206774303,43.8000299230265,34.5386556708304,44.1378403497335,45.1787966883501,43.3716970748365,52.1085340796047,55.6045641608184,47.1555930975728,24.1266054302836,23.9318500880232,94.418740419655,65.1210721279169,49.7706828962155,51.8075654737538,40.6558664534155,19.4402613947367,28.7112479668794,33.5777320095109,36.8374010123086,24.8527549870654,30.9690156974528,29.1568826712497,23.8838313988188,23.9649803487276,38.3429144608128,44.984984299053,112.416547484949,15.6697731227185,27.8536700494615,63.5134973444262,13.2745138339963,19.6652315285535,14.2092071773433,20.369348613637,9.7449624650655,20.9055900601871,23.7754029714763,29.0826983582004,24.5983191085458,25.5989773928011,17.9211634577498,14.4389760547462,55.1512161321137,42.4944181913892,8.40831444587904,33.4365774649284,40.6109135040806,26.2202161875044,29.2897256671775,13.0919928119278,38.4861601224485,26.6908409288413,68.5843317950931,34.6261131177108,31.0011699256139,45.2346936961169,37.9604053929974,31.8433345505419,11.0762717919343,50.2502568448481,60.1465500408441,36.9432493654168,48.8913552256039,50.1060095632478,54.8143853161311,48.2721945465763,49.4637231282119,42.2653386017447,40.9071922461094,132.699215904101,36.5368072586211,62.6223958750694,69.55543948924,85.7262013659322,76.208534747416,77.0075417857326,77.7769018375411,137.421869541616,90.4712513576714,25.474911836564,27.6209539955253,31.8470243073675,27.135192434964,31.8899948884238,25.444485225113,36.1566108550265,29.2219524227927,35.6760014472423,34.3938649716332,43.9683099903331,34.5636007509439,38.8693678372659,26.3542779877213,32.0458186354261,36.2479096108048,32.2248052201467,37.5507760536591,31.8517941227917,38.6946561197392,40.3865799792591,32.6927200549949,34.1800767613889,37.1314525618457,36.7529235066059,43.7119614159068,27.6611068010558,19.5347638969177,11.4833736460129,24.0075001400632,75.3439416725543,50.1112209454656,59.8905811353957,51.0196742208177,43.6367730510766,56.4751842617067,54.3183779078469,57.8624468573791,46.744065597483,55.491684101422,42.3020582538232,57.3769125197035,56.7404716062518,54.3770890781045,54.8825930456929,42.9679618998491,45.8878604411186,36.1955244198764,31.3607665018099,25.9920321658698,27.5765262675021,36.2262166316633,29.8750832996397,34.9801938455079,32.3452431057661,30.4175159868288,33.1982360839494,38.1120935402421,35.5979847371073,35.5525552835246,33.8168520810982,29.7822717678279,35.4952965653217,43.2690195843472,38.7133159953465,26.0580631812916,35.3176854257082,35.5269923021508,37.6447219077731,35.291017655749,32.6612386461871,28.7196917410253,38.4081778699251,32.7287914368527,22.4456908663095,26.6928790779392,30.3393805716735,33.1477144967448,33.4663576961687,32.794123866794,17.2369298777183,36.0254677005929,29.2224633505686,22.5720231841235,24.7062389413857,40.5768712335738
|phase1_expression=57.9738826519354,1.04692622291808,0,0,0,2.35030980676646,2.56973904655078,41.3194635013044,90.1047821770667,78.4116163178678,67.117443544398,61.0257016314324,25.1665072998872,25.4393371039282,34.9765249906446,55.883173799592,37.7763414189199,111.0426822061,114.353437627186,84.877930359606,39.9703463710028,36.6383609931267,56.1579546648711,16.1592347021341,12.15869189656,0,0,1.07735616342945,2.85035129184561,3.2763916868791,3.76941868114018,17.14582818341,12.3012957516914,0,3.17736781726402,3.15845826181135,3.67504841272264,243.166877458143,161.736416316427,264.903014450742,304.115679312034,288.928240137423,264.117632048948,29.9634426781874,30.6158332282934,48.6398893228456,4.69434806608824,2.39827672018491,3.51497892375155,4.27745777963423,3.91961980551015,4.31257693094915,127.346997997822,39.1695556686126,34.9537551108163,32.1574295044934,22.349608315223,25.7836046138721,9.3065571995415,10.0508286061686,3.80298842103708,4.74382344896785,6.22506357277798,2.2497492932035,3.9554654502679,4.2628806896766,2.99600110518405,5.76327457982332,14.6202353354953,8.50537411489651,10.0955981448663,11.4260393761521,14.1355866209033,11.3916443269907,8.81778333367775,3.67687514644008,22.0231761998777,40.8599481872601,45.3139273105918,9.62769900430415,12.7167824607349,17.1901412283731,27.080750903134,31.5147061617741,38.1995619442025,31.8198872311561,38.2979821349587,19.7583412574819,69.2894668998634,65.2182563721559,33.3344162006929,14.6272059086836,0,1.07940638327563,2.59910566979068,1.34408066129201,31.7404389497759,79.761390966531,48.5799828607365,42.4007489412408,156.899569631222,51.3305909657271,53.5091003383956,42.6640021891999,66.0297675084203,61.566447310449,46.0027244963453,46.4728390456574,159.246798443011,30.8759649254836,23.9409750937267,27.4018930480927,24.6758582063983,30.747418672735,27.6333461768906,19.2269884734403,14.3373081285937,27.3292784578633,68.1150125001403,29.6033335403759,35.334642953663,43.63877278217,93.1958806090611,40.4037499875935,42.0987880695045,10.4737392635522,51.4006884130398,23.9961092397363,49.4303183314222,38.1966130482298,48.952564501593,24.2512899577828,53.7117149394134,60.8602788446187,43.6354893575076,47.8611726049885,35.3382592560598,47.7722767142757,56.3571751307095,673.20349698083,38.7758920028857,29.657371471918,40.8741034658143,43.5536923545217,38.7127680171056,43.5586648968489,35.1381467098983,115.381703349601,19.185551371023,47.087413961787,41.348514178528,34.8521214559844,45.0436543745469,44.5762773148373,45.4778521461555,37.2194078950582,23.87524836865,27.5362260612745,44.8978329045036,35.6256328761063,37.5241695969754,35.4722261078199,40.0098603139005,30.8919843843424,36.8698399800834,33.7174219888091,23.0715125203672,24.6374872394728,26.1650161362434,35.6243397051637,24.0774364351192,24.5615978874558,23.4918623361424,17.9836601138898,52.9930670381601,28.7103868538204,3.96502539580558,5.81791246659797,41.3779206038354,42.2670742785998,34.536479634321,26.8239087749046,23.7944506914011,22.446623881282,15.1849299694244,15.481701744057,17.3421294072186,18.9008648439093,23.2007263671753,13.4822911298133,29.1786367330837,24.6935178835415,13.6560888686219,47.4131327330375,51.845558409617,60.891747025749,68.8531329445071,51.6199634392745,79.1089079424459,103.179493437742,116.650054786141,72.6809295499405,2.66807364378434,29.3647386060326,28.107936301188,24.9596944747188,27.1832562660594,22.1882986972223,24.9533334745791,25.3172600956713,19.7804976665543,18.1210532704134,24.4405951096503,15.2577788544086,18.4102227137591,8.84026072814891,5.74071723270119,5.30687873499704,50.6223741056497,42.2565848248181,41.5560689927166,38.5321344709677,40.1320324573339,43.3841206774303,43.8000299230265,34.5386556708304,44.1378403497335,45.1787966883501,43.3716970748365,52.1085340796047,55.6045641608184,47.1555930975728,24.1266054302836,23.9318500880232,94.418740419655,65.1210721279169,49.7706828962155,51.8075654737538,40.6558664534155,19.4402613947367,28.7112479668794,33.5777320095109,36.8374010123086,24.8527549870654,30.9690156974528,29.1568826712497,23.8838313988188,23.9649803487276,38.3429144608128,44.984984299053,112.416547484949,15.6697731227185,27.8536700494615,63.5134973444262,13.2745138339963,19.6652315285535,14.2092071773433,20.369348613637,9.7449624650655,20.9055900601871,23.7754029714763,29.0826983582004,24.5983191085458,25.5989773928011,17.9211634577498,14.4389760547462,55.1512161321137,42.4944181913892,8.40831444587904,33.4365774649284,40.6109135040806,26.2202161875044,29.2897256671775,13.0919928119278,38.4861601224485,26.6908409288413,68.5843317950931,34.6261131177108,31.0011699256139,45.2346936961169,37.9604053929974,31.8433345505419,11.0762717919343,50.2502568448481,60.1465500408441,36.9432493654168,48.8913552256039,50.1060095632478,54.8143853161311,48.2721945465763,49.4637231282119,42.2653386017447,40.9071922461094,132.699215904101,36.5368072586211,62.6223958750694,69.55543948924,85.7262013659322,76.208534747416,77.0075417857326,77.7769018375411,137.421869541616,90.4712513576714,25.474911836564,27.6209539955253,31.8470243073675,27.135192434964,31.8899948884238,25.444485225113,36.1566108550265,29.2219524227927,35.6760014472423,34.3938649716332,43.9683099903331,34.5636007509439,38.8693678372659,26.3542779877213,32.0458186354261,36.2479096108048,32.2248052201467,37.5507760536591,31.8517941227917,38.6946561197392,40.3865799792591,32.6927200549949,34.1800767613889,37.1314525618457,36.7529235066059,43.7119614159068,27.6611068010558,19.5347638969177,11.4833736460129,24.0075001400632,75.3439416725543,50.1112209454656,59.8905811353957,51.0196742208177,43.6367730510766,56.4751842617067,54.3183779078469,57.8624468573791,46.744065597483,55.491684101422,42.3020582538232,57.3769125197035,56.7404716062518,54.3770890781045,54.8825930456929,42.9679618998491,45.8878604411186,36.1955244198764,31.3607665018099,25.9920321658698,27.5765262675021,36.2262166316633,29.8750832996397,34.9801938455079,32.3452431057661,30.4175159868288,33.1982360839494,38.1120935402421,35.5979847371073,35.5525552835246,33.8168520810982,29.7822717678279,35.4952965653217,43.2690195843472,38.7133159953465,26.0580631812916,35.3176854257082,35.5269923021508,37.6447219077731,35.291017655749,32.6612386461871,28.7196917410253,38.4081778699251,32.7287914368527,22.4456908663095,26.6928790779392,30.3393805716735,33.1477144967448,33.4663576961687,32.794123866794,17.2369298777183,36.0254677005929,29.2224633505686,22.5720231841235,24.7062389413857,40.5768712335738
|short_description=p1@Far1
}}
}}

Revision as of 21:29, 18 April 2012

Short description:p1@Far1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Far1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000067929, ENSMUST00000123845, ENSMUST00000129087, ENSMUST00000136158, ENSMUST00000156554, ENSMUST00000164745, NM_026143, NM_027379, uc009jhn.1, uc009jho.1, uc009jhp.1, uc009jhq.1_5end
EntrezGene:Far1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Far1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G757.97
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E941.32
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E790.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F278.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E667.12
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F161.03
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E425.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E825.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A134.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A355.88
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A537.78
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2111.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4114.35
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A684.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A339.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H236.64
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I956.16
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D116.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.16
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B92.85
Ileum epithelium, pool2.CNhs13232.10253-104C13.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8243.17
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1161.74
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3264.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9304.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2288.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4264.12
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D829.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D930.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B348.64
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2127.35
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I939.17
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.95
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C132.16
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E122.35
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C525.78
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.74
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C83.00
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D910.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.14
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D211.39
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.82
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.86
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D745.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D49.63
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.72
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D817.19
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E427.08
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E531.51
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.20
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D631.82
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E119.76
Mouse Schwann, donor1.CNhs12507.11728-123D969.29
Mouse Schwann, donor2.CNhs12573.11746-123F965.22
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I779.76
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E348.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I842.40
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6156.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H151.33
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I853.51
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B642.66
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G166.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G261.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G346.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B646.47
accessory axillary lymph node, adult.CNhs10475.1063-29H9159.25
adrenal gland, adult.CNhs10508.49-24D730.88
adrenal gland, embryo E14.CNhs11038.406-44C523.94
adrenal gland, embryo E16.CNhs11004.1254-43D627.40
adrenal gland, embryo E17.CNhs11043.1263-45I124.68
adrenal gland, embryo E18.CNhs11026.1262-18F530.75
adrenal gland, neonate N00.CNhs11191.1311-23C127.63
adrenal gland, neonate N25.CNhs11223.1377-27I319.23
amnion, adult pregnant day17.5.CNhs10488.583-22A814.34
aorta, adult.CNhs10498.46-23H127.33
bone (os femoris), adult.CNhs10483.56-12G268.12
bone (os femoris), neonate N02.CNhs11227.1985-43F529.60
bone (os femoris), neonate N16.CNhs11225.1525-43A635.33
bone (os femoris), neonate N20.CNhs11195.1350-25C343.64
cecum, adult.CNhs10467.37-13H493.20
cerebellum, adult.CNhs10494.15-8B240.40
cerebellum, neonate N30.CNhs11135.1395-42I242.10
colon, adult.CNhs10468.36-18H710.47
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C751.40
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D124.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D449.43
corpora quadrigemina, adult.CNhs10501.16-22A438.20
corpus striatum, adult.CNhs10487.19-21D848.95
corpus striatum, neonate N00.CNhs11226.630-43F124.25
cortex, adult.CNhs10473.12-14D553.71
cortex, neonate N30.CNhs11107.1392-42F260.86
diencephalon, adult.CNhs10482.20-12F243.64
diencephalon, neonate N30.CNhs11201.1388-42B247.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B135.34
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A247.77
epididymis, adult.CNhs10490.58-23B256.36
eyeball, adult.CNhs10484.31-12G4673.20
eyeball, embryo E12.CNhs11016.345-16C638.78
eyeball, embryo E14.CNhs10521.399-16E229.66
eyeball, embryo E15.CNhs10593.426-16C940.87
eyeball, embryo E17.CNhs11023.1261-18D443.55
eyeball, neonate N00.CNhs11207.633-15C638.71
eyeball, neonate N01.CNhs11140.1532-43E743.56
eyeball, neonate N02.CNhs11205.1551-44G835.14
eyeball, neonate N16.CNhs11188.777-19A2115.38
forelimb, embryo E11.CNhs10596.335-25E219.19
forelimb, embryo E12.CNhs10600.359-14H247.09
forelimb, embryo E13.CNhs10589.384-1E241.35
forelimb, embryo E14.CNhs10577.413-26A834.85
forelimb, embryo E15.CNhs11007.437-20E745.04
forelimb, embryo E17.CNhs10598.1517-43C444.58
forelimb, embryo E18.CNhs11008.1520-43B545.48
gonad, embryo E13.CNhs11044.1564-45I637.22
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C823.88
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D227.54
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D544.90
heart, embryo E11.CNhs10586.331-24E935.63
heart, embryo E12.CNhs11015.353-12F537.52
heart, embryo E13.CNhs11013.376-3I935.47
heart, embryo E14.CNhs10597.403-26D440.01
heart, embryo E15.CNhs11017.431-16C830.89
heart, embryo E16.CNhs11021.457-17C636.87
heart, embryo E17.CNhs11025.479-18E533.72
heart, embryo E18.CNhs11030.1283-20G323.07
heart, neonate N00.CNhs11213.639-21E324.64
heart, neonate N03.CNhs11221.1349-25I226.17
heart, neonate N10.CNhs11118.749-24G135.62
heart, neonate N16.CNhs11209.782-15G124.08
heart, neonate N20.CNhs11127.821-26I624.56
heart, neonate N25.CNhs11196.1351-25D323.49
heart, neonate N30.CNhs11202.1390-42D217.98
hippocampus, adult.CNhs10478.13-16E852.99
hippocampus, neonate N00.CNhs11228.627-43G128.71
intestinal mucosa, adult.CNhs10506.860-29I33.97
intestine, adult.CNhs10496.178-9A35.82
intestine, embryo E12.CNhs11019.1251-16I541.38
intestine, embryo E13.CNhs11010.381-16D542.27
intestine, embryo E15.CNhs10602.976-16D834.54
intestine, embryo E16.CNhs10585.463-22H426.82
intestine, embryo E17.CNhs10582.482-18D323.79
intestine, embryo E18.CNhs10526.1289-20F722.45
intestine, neonate N00.CNhs11126.644-26D115.18
intestine, neonate N01.CNhs11192.1322-23E915.48
intestine, neonate N06.CNhs11102.688-20B817.34
intestine, neonate N07.CNhs11095.720-20F218.90
intestine, neonate N10.CNhs11098.755-23A523.20
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E329.18
intestine, neonate N30.CNhs11131.1384-42G124.69
kidney, embryo E14.CNhs10606.411-4I913.66
kidney, embryo E15.CNhs10997.434-16F847.41
kidney, embryo E16.CNhs10584.464-22A551.85
kidney, embryo E17.CNhs11028.483-18I260.89
kidney, embryo E18.CNhs11001.1288-20C768.85
kidney, neonate N00.CNhs11214.646-21G751.62
kidney, neonate N10.CNhs11206.758-6D579.11
kidney, neonate N20.CNhs11113.832-19I1103.18
kidney, neonate N25.CNhs11122.1353-25F3116.65
kidney, neonate N30.CNhs11203.1385-42H172.68
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F829.36
liver, embryo E13.CNhs10524.378-3H628.11
liver, embryo E14.CNhs10594.409-16E124.96
liver, embryo E15.CNhs10520.433-16D727.18
liver, embryo E16.CNhs10523.462-17F522.19
liver, embryo E17.CNhs10510.481-18A324.95
liver, embryo E18.CNhs10579.499-43G425.32
liver, neonate N00.CNhs11117.641-24F419.78
liver, neonate N03.CNhs11123.1345-25G218.12
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H215.26
liver, neonate N10.CNhs11115.751-24B918.41
liver, neonate N20.CNhs11220.823-25A38.84
liver, neonate N25.CNhs11198.1368-26H15.74
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B150.62
lung, embryo E12.CNhs10522.354-16G242.26
lung, embryo E14.CNhs10604.404-26F841.56
lung, embryo E15.CNhs11020.432-17C538.53
lung, embryo E16.CNhs10998.458-17B640.13
lung, embryo E17.CNhs10605.480-44A643.38
lung, embryo E18.CNhs10583.1287-20I643.80
lung, neonate N00.CNhs11224.640-42C634.54
lung, neonate N06.CNhs11212.683-20E544.14
lung, neonate N07.CNhs11111.715-19A345.18
lung, neonate N10.CNhs11219.750-23E643.37
lung, neonate N20.CNhs11109.822-18A452.11
lung, neonate N25.CNhs11119.1359-25C755.60
lung, neonate N30.CNhs11133.1394-42H247.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A124.13
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B694.42
mammary gland, adult pregnant day19.CNhs10476.588-5H265.12
medulla oblongata, adult.CNhs10477.17-12C249.77
medulla oblongata, neonate N30.CNhs11200.1396-42A351.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C740.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.44
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E128.71
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E233.58
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E336.84
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.85
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.97
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.16
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D523.96
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D638.34
olfactory brain, adult.CNhs10489.18-22I944.98
ovary, adult.CNhs10507.91-2I7112.42
ovary, embryo E18.CNhs11040.505-44H715.67
ovary, neonate N00.CNhs11217.1299-22I427.85
oviduct, adult pregnant day01.CNhs10500.988-6G663.51
pancreas, adult.CNhs10486.34-16E413.27
pancreas, embryo E14.CNhs11012.405-44F419.67
pancreas, embryo E15.CNhs11042.1556-45F214.21
pancreas, embryo E16.CNhs11003.460-26E520.37
pancreas, embryo E17.CNhs10599.1558-45G39.74
pancreas, embryo E18.CNhs10580.1535-43I720.91
pancreas, neonate N00.CNhs11105.645-26G923.78
pancreas, neonate N01.CNhs11138.1531-43D729.08
pancreas, neonate N02.CNhs11139.1539-43D824.60
pancreas, neonate N16.CNhs11136.787-43B625.60
pancreas, neonate N25.CNhs11094.1555-45E217.92
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G855.15
pituitary gland, embryo E12.CNhs11018.346-16E642.49
pituitary gland, embryo E13.CNhs11009.370-44C78.41
pituitary gland, embryo E14.CNhs11037.398-44A533.44
pituitary gland, embryo E15.CNhs10592.427-16B940.61
pituitary gland, embryo E16.CNhs11036.449-43F626.22
pituitary gland, embryo E17.CNhs11039.1265-44F529.29
pituitary gland, neonate N00.CNhs11190.1308-22E913.09
placenta, adult pregnant day10.CNhs10472.539-13I738.49
placenta, adult pregnant day17.CNhs10464.577-18G326.69
prostate, adult.CNhs10470.859-1F868.58
skin, adult.CNhs10492.30-1C334.63
skin, neonate N00.CNhs11124.650-25G431.00
skin, neonate N03.CNhs11215.662-22H345.23
skin, neonate N06.CNhs11097.693-20I537.96
skin, neonate N10.CNhs11108.762-6C431.84
small intestine, neonate N16.CNhs11114.790-21I111.08
spinal cord, adult.CNhs10505.24-13C950.25
spleen, adult.CNhs10465.25-2G260.15
spleen, embryo E16.CNhs11035.461-43C136.94
spleen, embryo E18.CNhs11011.1271-21F248.89
spleen, neonate N10.CNhs11116.752-24D150.11
spleen, neonate N20.CNhs11112.824-19H154.81
spleen, neonate N25.CNhs11099.1354-25G348.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C649.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C942.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D340.91
stomach, adult.CNhs10503.33-1H6132.70
stomach, embryo E12.CNhs10588.356-43E336.54
stomach, embryo E15.CNhs10603.1252-16G862.62
stomach, embryo E16.CNhs11022.459-17D469.56
stomach, embryo E17.CNhs11006.1035-18D585.73
stomach, embryo E18.CNhs10999.1286-20C676.21
stomach, neonate N03.CNhs11193.1340-24B877.01
stomach, neonate N07.CNhs11210.718-18A977.78
stomach, neonate N25.CNhs11104.1355-25E4137.42
stomach, neonate N30.CNhs11134.1386-42I190.47
submandibular gland, adult.CNhs10469.59-29C125.47
testis, adult.CNhs10504.57-7G527.62
testis, embryo E13.CNhs11031.389-23F531.85
testis, embryo E15.CNhs11034.443-27C527.14
testis, embryo E16.CNhs11033.470-26G531.89
testis, embryo E17.CNhs11029.486-18I525.44
testis, embryo E18.CNhs11027.503-18G536.16
testis, neonate N00.CNhs11189.1300-22B729.22
testis, neonate N07.CNhs11222.726-26I435.68
testis, neonate N10.CNhs11204.763-44D934.39
testis, neonate N20.CNhs11110.839-18H343.97
testis, neonate N30.CNhs11130.1391-42E234.56
thymus, adult.CNhs10471.38-12B538.87
thymus, embryo E14.CNhs11041.402-44I426.35
thymus, embryo E15.CNhs11005.430-45I232.05
thymus, embryo E16.CNhs11002.456-26C536.25
thymus, embryo E17.CNhs10581.478-18C132.22
thymus, embryo E18.CNhs10595.1273-19G437.55
thymus, neonate N02.CNhs11181.1541-43F831.85
thymus, neonate N03.CNhs11137.2104-43C738.69
thymus, neonate N06.CNhs11197.681-26C440.39
thymus, neonate N07.CNhs11211.713-19D332.69
thymus, neonate N10.CNhs11194.748-24E434.18
thymus, neonate N20.CNhs11186.820-7A237.13
thymus, neonate N25.CNhs11125.1362-25G736.75
thymus, neonate N30.CNhs11132.1393-42G243.71
tongue, adult.CNhs10499.32-1B427.66
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.53
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.48
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G524.01
urinary bladder, adult.CNhs10481.879-12E475.34
uterus, adult pregnant day19.CNhs10497.590-15F550.11
uterus, adult.CNhs10509.92-27E559.89
vagina, adult.CNhs10502.89-27D551.02
vesicular gland, adult.CNhs10491.51-27F843.64
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A156.48
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A254.32
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A357.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D746.74
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A455.49
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A657.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A756.74
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A854.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A954.88
whole body, embryo E11.CNhs11014.324-5I842.97
whole body, embryo E12.CNhs10587.857-27C945.89
whole body, embryo E13.CNhs10512.372-23H236.20
whole body, embryo E14.5.CNhs10578.420-27D231.36
whole body, embryo E14.CNhs10519.395-14B125.99
whole body, embryo E16.CNhs10514.453-14F227.58
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G536.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G529.88
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G534.98
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G532.35
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G530.42
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G538.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G535.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G535.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G533.82
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G535.50
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G543.27
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G538.71
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G535.32
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G535.53
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G537.64
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G535.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G532.66
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G528.72
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G538.41
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G532.73
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G522.45
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G530.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G533.15
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G533.47
whole body, embryo E17.5.CNhs10513.490-9F932.79
whole body, embryo E17.CNhs10517.475-3I517.24
whole body, embryo E18.CNhs10516.493-3B336.03
whole body, neonate N00.CNhs10525.657-19C229.22
whole body, neonate N01.CNhs10576.659-23C622.57
whole body, neonate N06.CNhs10515.692-21D124.71
whole body, neonate N10.CNhs10518.761-6B440.58





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen


Uber anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:120657368..120657423,%2B&oldid=958553"