Personal tools

MacroAPE 1083:TGTGTGCG,motif245

From FANTOM5_SSTAR

Revision as of 12:56, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: TGTGTGCG,motif245,CNhs10646,T:1414.0(40.46%),B:19167.3(30.04%),P:1e-38

Motif matrix
POACGT
1188.0624.2421.4141220.282
2135.7442.8281063.328212.1
3151.29863.631.4141197.658
4353.5229.068746.59284.84
5100.394289.871.4141022.322
61.41491.911139.684180.992
71.4141242.9061.414168.266
8469.44887.668854.0562.828

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

RAP1#MA0359.100.005817662.7692118TGTGTGCGTGTATGGGTG-
DAL82#MA0291.100.007918243.7690818TGTGTGCGAATGTGCGC+
HMG-1#MA0044.120.01168075.5617TGTGTGCGGTTGTACTC+
TEA1#MA0405.110.01507357.1749917TGTGTGCGATGCCCGC-