Personal tools

MacroAPE 1083:Motif313

From FANTOM5_SSTAR

Revision as of 13:14, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: motif313

Motif matrix
POACGT
0115119501426810520
0213517102361438608370
0320440975453349724501
04700715484256028532
05202681284281014017147
06440916612931512294
07157086518759787732
08398449861641312882

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

brk#MA0213.100.003152581.5006318AGCCCCAGGGCGCCAG-
TBF1#MA0403.100.005393772.5674318AGCCCCAGAACCCTAA+
MET28#MA0332.1-20.005722322.7238216AGCCCCAGCCACAG-
MET32#MA0334.100.006600133.1416617AGCCCCAGCGCCACA+
RUNX1#MA0002.210.007457933.5499718AGCCCCAGAAACCACAGAC-
MIG1#MA0337.1-10.00811743.8638817AGCCCCAGCCCCCGC+
Macho-1#MA0118.110.01037264.9373418AGCCCCAGGAACCCCCA-
TFAP2A#MA0003.1-10.01161175.5271717AGCCCCAGGCCCGGGGG+
BAS1#MA0278.140.01257775.9869718AGCCCCAGGCACAGCCAGAGTCAAGTCAA+
ADR1#MA0268.1-10.01404826.6869317AGCCCCAGACCCCAC+
Zfx#MA0146.110.01516177.2169618AGCCCCAGCAGGCCTCGGCCCC-
PPARG::RXRA#MA0065.270.01535267.3078518AGCCCCAGTGACCTTTGCCCTAC-
MET31#MA0333.100.01987979.4627418AGCCCCAGCGCCACACT-
EBF1#MA0154.1-10.02066699.8374617AGCCCCAGACCCAAGGGA+