Personal tools

MacroAPE 1083:CRATCGC,motif590

From FANTOM5_SSTAR

Revision as of 13:56, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: CRATCGC,motif590,CNhs12322,T:1430.0(35.79%),B:18774.5(27.36%),P:1e-30

Motif matrix
POACGT
11.431425.711.431.43
2610.611.43653.51164.45
3979.551.431.43447.59
41.431.431.431425.71
5418.991008.151.431.43
6267.411.431159.731.43
7228.8807.95391.821.43

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Ddit3::Cebpa#MA0019.150.009210224.3840617CGATCGCAGATGCAATCCC+
NFYA#MA0060.160.01131625.3864917CGATCGCCTCAGCCAATCAGCGC+
GATA3#MA0037.100.01390866.6205116CGATCGCCTATCT-