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MacroAPE 1083:10-CGCGTGTTA

From FANTOM5_SSTAR

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Full Name: 10-CGCGTGTTA,CNhs13235,BestGuess:AHR_ARNT_ARNT2.p2.SwissRegulon.nucfreq(0.731547557187781),T:1365.0(55.20%),B:19304.7(43.43%),P:1e-31

Motif matrix
POACGT
1125.58838.11177.45223.86
210.9299.6451128.855125.58
3146.055838.11211.575169.26
4106.47219.765814.905223.86
5101.01245.747.775970.515
6187.005180.18772.59225.225
7126.945105.105132.4051000.545
8161.07202.02227.955773.955
91056.5145.0451.365262.08

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

Arnt::Ahr#MA0006.100.0006873840.3271950.654396CGCGTGTTATGCGTG+
caup#MA0217.1-40.004561312.1711815CGCGTGTTATGTTA-
RSC3#MA0374.100.006174162.938917CGCGTGTTACGCGCGG+
MBP1#MA0329.110.01272416.0566716CGCGTGTTAACGCGTA+
mirr#MA0233.1-40.01276416.075715CGCGTGTTATGTTT-
ara#MA0210.1-40.01435236.831715CGCGTGTTATGTTA-
MAX#MA0058.110.01663767.9194919CGCGTGTTATCACGTGGTC-
HAC1#MA0310.100.01776848.4577418CGCGTGTTACACGTGTC-
Macho-1#MA0118.100.01996059.501219CGCGTGTTATGGGGGGTC+
MBP1::SWI6#MA0330.110.02037059.6963616CGCGTGTTAACGCGTT+
DOT6#MA0351.1130.02080549.9033518CGCGTGTTATTCTGCACCTCATCGCATCCT+