Personal tools

MacroAPE 1083:8-GAAACAACCT

From FANTOM5_SSTAR

Revision as of 14:50, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: 8-GAAACAACCT,CNhs11998,BestGuess:FOXO1_si_HM09(0.696515238548895),T:1406.0(37.52%),B:11559.5(26.69%),P:1e-46

Motif matrix
POACGT
1178.562201.058878.75147.63
21095.274139.19411.248160.284
31006.696170.126189.8139.368
41197.91257.646126.5423.902
5177.1561037.628164.50226.714
6852.036179.968168.72205.276
7885.78240.426178.562101.232
8213.712919.524203.8768.894
980.1421057.312251.67416.872
10195.4341.406272.764936.396

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

STE12#MA0393.110.002115161.0068216GAAACAACCTTGAAACA+
En1#MA0027.110.003913041.86261110GAAACAACCTGAACACTACTT-
Su(H)#MA0085.160.00443952.1132110GAAACAACCTCTGTGGGAAACGAGAT+
dl_1#MA0022.120.00577062.7468110GAAACAACCTCGGAAAAACCCC-
mirr#MA0233.1-10.006432813.0620215GAAACAACCTAAACA+
FOXI1#MA0042.130.009353474.4522519GAAACAACCTAAACAAACATCC-
ara#MA0210.1-10.01223185.8223515GAAACAACCTTAACA+
HCM1#MA0317.110.01284666.1149817GAAACAACCTATAAACAA+
REL#MA0101.110.01749238.3263519GAAACAACCTGGAAATCCCC-