Personal tools

MacroAPE 1083:GTWCAACA,motif210

From FANTOM5_SSTAR

Revision as of 15:04, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: GTWCAACA,motif210,CNhs11971,T:944.0(29.14%),B:14467.0(19.32%),P:1e-40

Motif matrix
POACGT
1192.576285.088465.3920.944
20.9440.9440.944941.168
3452.1760.944179.36311.52
40.944821.280.944120.832
5485.2160.944226.56231.28
6624.928317.1840.9440.944
70.944816.56125.5520.944
8451.232252.048239.7760.944

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

HMG-1#MA0044.120.001802670.8580717GTACAACAGAATACAAC-
BRCA1#MA0133.1-20.007457083.5495716GTACAACAACAACAC+