Personal tools

MacroAPE 1083:6-CGCCTAAA

From FANTOM5_SSTAR

Revision as of 12:00, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: 6-CGCCTAAA,CNhs13503,BestGuess:E2F5_do_HM09(0.712092380577826),T:1150.0(27.72%),B:8937.9(20.12%),P:1e-31

Motif matrix
POACGT
197.75925.7589.736.8
21.1597.75975.275.9
312.65808.45177.1151.8
494.3738.3218.598.9
5104.65142.6224.25678.5
61012.020.71.15116.15
7867.193.1579.35110.4
8894.7142.61.15111.55

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

E2F1#MA0024.110.004979052.3700317CGCCTAAAGCGCCAAA-
GIS1#MA0306.110.005038432.3982918CGCCTAAAACCCCTAAA+
UME6#MA0412.140.005421382.5805818CGCCTAAATCGGCGGCTAATT+
RPH1#MA0372.110.008693264.1379917CGCCTAAAACCCCTAA+
YDR026C#MA0421.120.009131934.346818CGCCTAAAGCCGGGTAAA-
YPR196W#MA0437.100.01351366.4324618CGCCTAAACGGAGAAAT-
hb#MA0049.1-10.01533997.3017917CGCCTAAAGCATAAAAAA+
YPR015C#MA0435.1120.01924689.1614818CGCCTAAATGTAAGGATTTACGTCTTCA-