Personal tools

MacroAPE 1083:12-TGCAGTNTTT

From FANTOM5_SSTAR

Revision as of 12:11, 7 September 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Full Name: 12-TGCAGTNTTT,BestGuess:PB0146.1_Mafk_2(0.747344236872539),T:1408.0(26.75%),B:8671.2(20.11%),P:1e-27

Motif matrix
POACGT
1160.51299.968181.632965.888
250.68870.41039.104247.808
31.4081403.7761.4081.408
4877.1841.408223.872305.536
581.6641.4081310.84814.08
65.632199.9361.4081201.024
7373.12268.928346.368420.992
8205.5681.408104.1921096.832
91.408309.761.4081095.424
10294.272298.4961.408813.824

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

run::Bgb#MA0242.110.01419236.7555518TGCAGTTTTTTTGCGGTTA-
AFT1#MA0269.190.01947339.2693110TGCAGTTTTTCCAATCGGGTGCAATATGTAA-