NonredundantMotifs:55

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known55
• db :UNIPROBE
• Id :Zic1_primary
• name :SCI09
• score :1.9305460342991163
  
• External refs:

EntrezGene:7545
UniProt:7545

• Internal refs:

EntrezGene:7545

Motif matrix

P0 A C G T 1 0.174039591746383 0.367917808376691 0.270176288061016 0.18786631181591 2 0.359560309475115 0.309872175539918 0.111047091794689 0.219520423190278 3 0.0944683036866483 0.790352458904872 0.0260338276643511 0.0891454097441286 4 0.114860285151229 0.779490252302552 0.0508946340643847 0.0547548284818338 5 0.105194978758313 0.837711636099516 0.0318568613529546 0.0252365237892168 6 0.0452340382891032 0.825038720993972 0.0739899787188562 0.0557372619980684 7 0.145554738614157 0.592986406651292 0.228414503273096 0.0330443514614552 8 0.045273191233523 0.175000890728307 0.607614869174327 0.172111048863843 9 0.0557372619980684 0.0739899787188562 0.825038720993972 0.0452340382891032 10 0.0252365237892168 0.0318568613529545 0.837711636099516 0.105194978758313 11 0.0547548284818338 0.0508946340643847 0.779490252302552 0.114860285151229 12 0.0891454097441286 0.0260338276643511 0.790352458904872 0.0944683036866483 13 0.0608325786474077 0.0677871868953474 0.717352267276858 0.154027967180387 14 0.0977422772443525 0.194545217643926 0.591608125508604 0.116104379603117