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Coexpression cluster:C72

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Full id: C72_skeletal_tongue_throat_heart_diaphragm_penis_left



Phase1 CAGE Peaks

Hg19::chr10:104535994..104536014,+p4@C10orf26
Hg19::chr10:104536050..104536059,+p18@C10orf26
Hg19::chr10:115423792..115423806,-p1@NRAP
Hg19::chr10:123778989..123779000,+p52@TACC2
Hg19::chr10:123954672..123954673,+p@chr10:123954672..123954673
+
Hg19::chr10:134649885..134649921,-p@chr10:134649885..134649921
-
Hg19::chr10:29918007..29918031,-p@chr10:29918007..29918031
-
Hg19::chr10:29923893..29923907,-p1@SVIL
Hg19::chr10:50507232..50507257,+p1@C10orf71
Hg19::chr10:50507262..50507282,+p3@C10orf71
Hg19::chr10:6557469..6557474,-p4@PRKCQ
Hg19::chr10:72141310..72141325,-p5@LRRC20
Hg19::chr10:75226182..75226220,-p3@PPP3CB
Hg19::chr10:76868808..76868825,-p5@DUSP13
Hg19::chr10:97037060..97037066,-p@chr10:97037060..97037066
-
Hg19::chr10:99127126..99127145,-p5@RRP12
Hg19::chr11:10920793..10920806,-p2@uc001mjn.1
Hg19::chr11:126077493..126077505,-p3@RPUSD4
Hg19::chr11:17410660..17410710,-p3@KCNJ11
Hg19::chr11:64514748..64514770,-p@chr11:64514748..64514770
-
Hg19::chr11:64518023..64518030,-p19@PYGM
Hg19::chr11:73720122..73720136,-p1@UCP3
Hg19::chr12:102020657..102020663,+p8@MYBPC1
Hg19::chr12:102057261..102057282,+p@chr12:102057261..102057282
+
Hg19::chr12:102079632..102079647,-p@chr12:102079632..102079647
-
Hg19::chr12:10870989..10871013,-p11@CSDA
Hg19::chr12:10871020..10871032,-p26@CSDA
Hg19::chr12:10871049..10871064,-p19@CSDA
Hg19::chr12:10871068..10871079,-p25@CSDA
Hg19::chr12:10875658..10875708,-p2@CSDA
Hg19::chr12:10875831..10876025,-p1@CSDA
Hg19::chr12:10876282..10876288,-p29@CSDA
Hg19::chr12:122884443..122884457,-p21@CLIP1
Hg19::chr12:122884464..122884467,-p38@CLIP1
Hg19::chr12:122884488..122884502,-p24@CLIP1
Hg19::chr12:122884508..122884523,-p15@CLIP1
Hg19::chr12:32654965..32654977,+p15@FGD4
Hg19::chr12:48516441..48516454,+p6@PFKM
Hg19::chr12:48545157..48545170,-p4@ASB8
Hg19::chr12:57115098..57115135,-p@chr12:57115098..57115135
-
Hg19::chr12:67751652..67751685,-p@chr12:67751652..67751685
-
Hg19::chr12:68494798..68494815,-p@chr12:68494798..68494815
-
Hg19::chr12:81101312..81101321,+p6@MYF6
Hg19::chr12:81101442..81101449,+p3@MYF6
Hg19::chr12:81101462..81101467,+p4@MYF6
Hg19::chr12:81101472..81101483,+p2@MYF6
Hg19::chr12:81101723..81101726,+p10@MYF6
Hg19::chr12:81101753..81101762,+p5@MYF6
Hg19::chr12:96408839..96408854,-p@chr12:96408839..96408854
-
Hg19::chr13:21289714..21289723,+p20@IL17D
Hg19::chr13:21289746..21289769,+p2@IL17D
Hg19::chr13:21387250..21387271,-p@chr13:21387250..21387271
-
Hg19::chr13:21395866..21395879,-p6@XPO4
Hg19::chr13:21395886..21395893,-p7@XPO4
Hg19::chr13:21401247..21401280,-p@chr13:21401247..21401280
-
Hg19::chr13:50961291..50961319,-p@chr13:50961291..50961319
-
Hg19::chr13:51101468..51101499,-p1@ENST00000428276
Hg19::chr14:24600714..24600729,+p3@FITM1
Hg19::chr14:56127960..56127979,+p23@KTN1
Hg19::chr14:56127989..56128008,+p19@KTN1
Hg19::chr14:64579805..64579812,+p@chr14:64579805..64579812
+
Hg19::chr14:64680854..64680891,+p2@SYNE2
Hg19::chr14:65289871..65289874,-p8@SPTB
Hg19::chr14:94430858..94430887,-p@chr14:94430858..94430887
-
Hg19::chr14:94442896..94442930,-p1@ASB2
Hg19::chr15:51058024..51058028,-p3@SPPL2A
Hg19::chr15:56209487..56209498,-p13@NEDD4
Hg19::chr15:99548751..99548758,-p5@PGPEP1L
Hg19::chr15:99548861..99548881,-p4@PGPEP1L
Hg19::chr16:7382840..7382860,+p3@RBFOX1
Hg19::chr17:10421962..10421969,-p2@MYH1
Hg19::chr17:25904420..25904463,+p3@KSR1
Hg19::chr17:33640586..33640597,+p@chr17:33640586..33640597
+
Hg19::chr17:33640639..33640650,+p@chr17:33640639..33640650
+
Hg19::chr17:37822491..37822502,-p@chr17:37822491..37822502
-
Hg19::chr17:38171959..38171970,+p6@CSF3
Hg19::chr17:42248036..42248054,+p2@ASB16
Hg19::chr17:55601633..55601643,+p@chr17:55601633..55601643
+
Hg19::chr17:65052469..65052491,+p6@CACNG1
Hg19::chr17:79792918..79792932,-p1@PPP1R27
Hg19::chr18:32487085..32487092,-p@chr18:32487085..32487092
-
Hg19::chr18:55922965..55922972,+p@chr18:55922965..55922972
+
Hg19::chr19:14673282..14673294,+p14@TECR
Hg19::chr19:35521675..35521684,+p8@SCN1B
Hg19::chr19:38664309..38664322,+p@chr19:38664309..38664322
+
Hg19::chr19:38924316..38924346,+p1@RYR1
Hg19::chr19:38932979..38933014,+p@chr19:38932979..38933014
+
Hg19::chr19:40324017..40324030,-p@chr19:40324017..40324030
-
Hg19::chr19:40324034..40324066,-p@chr19:40324034..40324066
-
Hg19::chr19:40771997..40772002,-p25@AKT2
Hg19::chr19:4791722..4791764,+p1@FEM1A
Hg19::chr19:4793532..4793537,+p5@FEM1A
Hg19::chr19:50996327..50996328,-p@chr19:50996327..50996328
-
Hg19::chr19:55660468..55660472,-p@chr19:55660468..55660472
-
Hg19::chr1:115238140..115238153,-p2@AMPD1
Hg19::chr1:115238154..115238174,-p1@AMPD1
Hg19::chr1:118363660..118363674,-p@chr1:118363660..118363674
-
Hg19::chr1:151148497..151148512,-p2@TMOD4
Hg19::chr1:160160421..160160424,+p7@CASQ1
Hg19::chr1:160160431..160160442,+p5@CASQ1
Hg19::chr1:160171297..160171308,+p@chr1:160171297..160171308
+
Hg19::chr1:201081548..201081569,-p1@CACNA1S
Hg19::chr1:201081583..201081592,-p2@CACNA1S
Hg19::chr1:201378284..201378297,-p@chr1:201378284..201378297
-
Hg19::chr1:201390850..201390865,-p1@TNNI1
Hg19::chr1:201391293..201391300,-p6@TNNI1
Hg19::chr1:225712376..225712390,-p@chr1:225712376..225712390
-
Hg19::chr1:225888421..225888432,+p2@ENST00000448264
p2@uc001hpe.1
Hg19::chr1:229568418..229568436,-p@chr1:229568418..229568436
-
Hg19::chr1:229568439..229568458,-p@chr1:229568439..229568458
-
Hg19::chr1:231557409..231557418,-p23@EGLN1
Hg19::chr1:231558425..231558448,-p@chr1:231558425..231558448
-
Hg19::chr1:231558449..231558469,-p@chr1:231558449..231558469
-
Hg19::chr1:231558471..231558476,-p@chr1:231558471..231558476
-
Hg19::chr1:231558483..231558511,-p@chr1:231558483..231558511
-
Hg19::chr1:24422589..24422609,+p@chr1:24422589..24422609
+
Hg19::chr1:26394114..26394130,-p1@TRIM63
Hg19::chr1:44186258..44186263,-p@chr1:44186258..44186263
-
Hg19::chr1:64013603..64013614,+p6@EFCAB7
Hg19::chr1:64013668..64013680,+p7@EFCAB7
Hg19::chr1:64013703..64013712,+p11@EFCAB7
Hg19::chr1:66796212..66796231,+p29@PDE4B
Hg19::chr1:9129853..9129865,-p18@SLC2A5
Hg19::chr1:93586380..93586411,+p8@MTF2
Hg19::chr20:20057067..20057076,-p1@LOC643659
Hg19::chr20:20069786..20069797,-p@chr20:20069786..20069797
-
Hg19::chr20:36152822..36152833,-p14@BLCAP
Hg19::chr20:36152914..36152926,-p8@BLCAP
Hg19::chr20:62124546..62124576,-p@chr20:62124546..62124576
-
Hg19::chr20:62129163..62129193,-p5@EEF1A2
Hg19::chr21:47769234..47769239,+p@chr21:47769234..47769239
+
Hg19::chr22:25507371..25507375,+p@chr22:25507371..25507375
+
Hg19::chr22:25508672..25508687,-p1@LOC100128531
Hg19::chr22:28193943..28193956,-p@chr22:28193943..28193956
-
Hg19::chr2:141004685..141004710,-p@chr2:141004685..141004710
-
Hg19::chr2:152381100..152381108,-p@chr2:152381100..152381108
-
Hg19::chr2:152383493..152383501,-p@chr2:152383493..152383501
-
Hg19::chr2:152393686..152393693,-p@chr2:152393686..152393693
-
Hg19::chr2:152432736..152432741,-p@chr2:152432736..152432741
-
Hg19::chr2:152470910..152470923,-p@chr2:152470910..152470923
-
Hg19::chr2:152527650..152527659,-p20@NEB
Hg19::chr2:152590465..152590472,-p@chr2:152590465..152590472
-
Hg19::chr2:152590502..152590507,-p@chr2:152590502..152590507
-
Hg19::chr2:168043855..168043866,+p2@XIRP2
Hg19::chr2:168043874..168043891,+p1@XIRP2
Hg19::chr2:168099250..168099268,+p11@XIRP2
Hg19::chr2:168102459..168102468,+p73@XIRP2
Hg19::chr2:168106863..168106864,+p99@XIRP2
Hg19::chr2:170366203..170366225,+p1@KBTBD10
Hg19::chr2:170370682..170370697,+p4@KBTBD10
Hg19::chr2:170374754..170374760,+p@chr2:170374754..170374760
+
Hg19::chr2:179128213..179128216,+p@chr2:179128213..179128216
+
Hg19::chr2:179396338..179396348,-p@chr2:179396338..179396348
-
Hg19::chr2:179401894..179401905,-p@chr2:179401894..179401905
-
Hg19::chr2:179441728..179441742,-p@chr2:179441728..179441742
-
Hg19::chr2:179444787..179444797,-p@chr2:179444787..179444797
-
Hg19::chr2:179446736..179446745,-p119@TTN
Hg19::chr2:179457343..179457356,-p@chr2:179457343..179457356
-
Hg19::chr2:179469980..179469991,-p@chr2:179469980..179469991
-
Hg19::chr2:179659944..179659966,-p12@TTN
Hg19::chr2:179664253..179664278,-p@chr2:179664253..179664278
-
Hg19::chr2:179664332..179664350,-p@chr2:179664332..179664350
-
Hg19::chr2:179672142..179672157,-p1@TTN
Hg19::chr2:220299547..220299572,+p3@SPEG
Hg19::chr2:233390863..233390878,+p1@CHRND
Hg19::chr2:233393025..233393037,+p@chr2:233393025..233393037
+
Hg19::chr2:239047304..239047335,+p1@KLHL30
Hg19::chr2:239047337..239047362,+p2@KLHL30
Hg19::chr2:29398214..29398229,+p27@CLIP4
Hg19::chr3:10512714..10512741,-p@chr3:10512714..10512741
-
Hg19::chr3:119338227..119338252,+p@chr3:119338227..119338252
+
Hg19::chr3:119338393..119338397,+p@chr3:119338393..119338397
+
Hg19::chr3:141132014..141132021,+p@chr3:141132014..141132021
+
Hg19::chr3:141148377..141148401,+p@chr3:141148377..141148401
+
Hg19::chr3:155011483..155011495,-p1@LOC100507537
Hg19::chr3:155011771..155011808,-p1@ENST00000489090
Hg19::chr3:39230861..39230875,-p3@XIRP1
Hg19::chr3:39230927..39230934,-p25@XIRP1
Hg19::chr3:42084467..42084485,+p@chr3:42084467..42084485
+
Hg19::chr3:42084492..42084507,+p@chr3:42084492..42084507
+
Hg19::chr3:46607722..46607747,-p2@LRRC2
Hg19::chr3:48057857..48057863,-p56@MAP4
Hg19::chr3:48057877..48057888,-p37@MAP4
Hg19::chr3:48972313..48972330,+p@chr3:48972313..48972330
+
Hg19::chr3:5024621..5024658,+p@chr3:5024621..5024658
+
Hg19::chr3:52485802..52485823,+p@chr3:52485802..52485823
+
Hg19::chr3:69168368..69168389,-p@chr3:69168368..69168389
-
Hg19::chr3:69168395..69168418,-p@chr3:69168395..69168418
-
Hg19::chr3:69168465..69168472,-p@chr3:69168465..69168472
-
Hg19::chr3:99833172..99833179,-p24@FILIP1L
Hg19::chr4:100575726..100575740,-p@chr4:100575726..100575740
-
Hg19::chr4:186434325..186434339,-p@chr4:186434325..186434339
-
Hg19::chr4:186434340..186434350,-p@chr4:186434340..186434350
-
Hg19::chr4:186499610..186499623,-p@chr4:186499610..186499623
-
Hg19::chr4:44653613..44653624,-p5@YIPF7
Hg19::chr4:44653636..44653647,-p4@YIPF7
Hg19::chr4:8129363..8129374,-p4@ABLIM2
Hg19::chr4:8129425..8129427,-p19@ABLIM2
Hg19::chr5:138730817..138730838,-p2@C5orf65
Hg19::chr5:145363278..145363284,+p@chr5:145363278..145363284
+
Hg19::chr5:150027785..150027800,+p4@AB384087
Hg19::chr5:150727066..150727082,-p2@SLC36A2
Hg19::chr5:16508944..16508960,-p5@FAM134B
Hg19::chr5:58652758..58652767,-p52@PDE4D
Hg19::chr5:58652888..58652893,-p73@PDE4D
Hg19::chr5:79026427..79026439,+p@chr5:79026427..79026439
+
Hg19::chr5:95174061..95174068,+p@chr5:95174061..95174068
+
Hg19::chr5:95179965..95179971,+p@chr5:95179965..95179971
+
Hg19::chr5:95179988..95179991,+p@chr5:95179988..95179991
+
Hg19::chr5:95180071..95180077,+p@chr5:95180071..95180077
+
Hg19::chr5:95180155..95180172,+p@chr5:95180155..95180172
+
Hg19::chr6:118985968..118985983,+p@chr6:118985968..118985983
+
Hg19::chr6:123958371..123958380,-p12@TRDN
Hg19::chr6:125535391..125535409,+p@chr6:125535391..125535409
+
Hg19::chr6:139613079..139613086,-p5@TXLNB
Hg19::chr6:139613101..139613118,-p2@TXLNB
Hg19::chr6:17280583..17280593,+p@chr6:17280583..17280593
+
Hg19::chr6:17280605..17280637,+p@chr6:17280605..17280637
+
Hg19::chr6:17280912..17280921,+p@chr6:17280912..17280921
+
Hg19::chr6:17290080..17290094,+p8@RBM24
Hg19::chr6:17290247..17290256,+p18@RBM24
Hg19::chr6:45983517..45983534,-p4@CLIC5
Hg19::chr6:45983549..45983578,-p2@CLIC5
Hg19::chr6:89856542..89856550,-p@chr6:89856542..89856550
-
Hg19::chr6:89856579..89856590,-p@chr6:89856579..89856590
-
Hg19::chr6:89856603..89856608,-p@chr6:89856603..89856608
-
Hg19::chr7:101944503..101944523,+p@chr7:101944503..101944523
+
Hg19::chr7:123295911..123295926,+p1@LMOD2
Hg19::chr7:50713346..50713354,-p@chr7:50713346..50713354
-
Hg19::chr7:7728987..7728990,+p@chr7:7728987..7728990
+
Hg19::chr8:124033810..124033819,-p@chr8:124033810..124033819
-
Hg19::chr8:124665857..124665868,-p@chr8:124665857..124665868
-
Hg19::chr8:124665891..124665894,-p@chr8:124665891..124665894
-
Hg19::chr8:124665957..124665968,-p@chr8:124665957..124665968
-
Hg19::chr8:124665971..124665974,-p@chr8:124665971..124665974
-
Hg19::chr8:17611435..17611446,-p41@MTUS1
Hg19::chr8:22785524..22785532,-p5@PEBP4
Hg19::chr8:33455219..33455228,-p9@DUSP26
Hg19::chr8:33457258..33457299,-p2@DUSP26
Hg19::chr8:42358586..42358595,-p21@SLC20A2
Hg19::chr8:48566633..48566645,+p17@KIAA0146
Hg19::chr8:48566659..48566670,+p16@KIAA0146
Hg19::chr8:49984690..49984720,+p3@C8orf22
Hg19::chr8:49984894..49984911,+p1@C8orf22
Hg19::chr9:103340319..103340320,+p7@MURC
Hg19::chr9:112182901..112182913,-p@chr9:112182901..112182913
-
Hg19::chr9:112183748..112183770,-p@chr9:112183748..112183770
-
Hg19::chr9:114246121..114246166,-p4@KIAA0368
Hg19::chrX:135278908..135278922,+p39@FHL1
Hg19::chrX:135279051..135279063,+p29@FHL1
Hg19::chrX:135289300..135289316,+p20@FHL1
Hg19::chrX:150041491..150041517,-p@chrX:150041491..150041517
-


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

No results for this coexpression

Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

No GOStat results

Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br>disease_data<br>

Cell Type
Ontology termp-valuen

Uber Anatomy
Ontology termp-valuen

Disease
Ontology termp-valuen


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

No analysis results for this cluster

Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

"{{{coexpression_dpi_cluster_scores_median}}}" is not a number.

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