UBERON:0005631
From FANTOM5_SSTAR
Name: | extraembryonic membrane | |
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Definition: | "Intrinsic membrane that arises from embryonic germ layers and grow to surround the developing embryo." [ISBN10:0073040584] | |
Xrefs: |
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Comments: | Taxon notes: stuctures homologous to the four extraembryonic membranes appear in mammals [ISBN10:0073040584 "Vertebrates, Kardong"] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000158(membranous layer),UBERON:0000478(extraembryonic structure) |
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Children
is a: | UBERON:0000305 (amnion),UBERON:0001040 (yolk sac),UBERON:0003124 (chorion),UBERON:0004340 (allantois) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11547-120B8 (Mesenchymal Stem Cells - amniotic membrane, donor1)
- 11613-122A2 (Amniotic Epithelial Cells, donor2)
- 11627-122B7 (Mesenchymal Stem Cells - amniotic membrane, donor2)
- 11694-123A2 (Amniotic Epithelial Cells, donor3)
- 12235-129G3 (amniotic membrane cells, donor1)
- 12236-129G4 (amniotic membrane cells, donor2)
- 12237-129G5 (amniotic membrane cells, donor3)
- 12238-129G6 (chorionic membrane cells, donor1)
- 12239-129G7 (chorionic membrane cells, donor2)
... further results Mouse (Mus musculus)
- 11533-120A3 (Amniotic Epithelial Cells, donor1)
- 11547-120B8 (Mesenchymal Stem Cells - amniotic membrane, donor1)
- 11613-122A2 (Amniotic Epithelial Cells, donor2)
- 11627-122B7 (Mesenchymal Stem Cells - amniotic membrane, donor2)
- 11694-123A2 (Amniotic Epithelial Cells, donor3)
- 12235-129G3 (amniotic membrane cells, donor1)
- 12236-129G4 (amniotic membrane cells, donor2)
- 12237-129G5 (amniotic membrane cells, donor3)
- 12238-129G6 (chorionic membrane cells, donor1)
- 12239-129G7 (chorionic membrane cells, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005631 (extraembryonic membrane), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data