Personal tools

UBERON:0002367

From FANTOM5_SSTAR

Revision as of 17:02, 26 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:prostate gland
Definition:"The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid." [GO:0030850, Wikipedia:Prostate]
Xrefs:
links:

BTO:0001129
EFO:0000858
EMAPA:19287
EV:0100104
FMA:9600
GAID:392
galen:ProstateGland
[1]
[2]
MA:0000404
MAT:0000078
MESH:A.05.360.444.575
MIAA:0000078
ncithesaurus:Prostate_Gland
OpenCyc:Mx4rv6trqZwpEbGdrcN5Y29ycA
SCTID:181422007

VHOG:0001261
Synonyms: "male prostate" EXACT [PMID:10668204]
"prostata" RELATED LATIN [Wikipedia:Prostate]
"prostate" EXACT []
Comments:TODO - FMA treats the gland as part of the prostate - see also FMA:74119.
Alt_id: UBERON:FMA_9600-MA_0000404-MIAA_0000078
Subset: major_organ
organ_slim
uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000077(mixed endoderm/mesoderm-derived structure),UBERON:0010147(male accessory sex gland)



Children

derives from:FF:0010022 (human prostate - adult sample),FF:0011435 (mouse prostate- adult sample),FF:0101019 (prostate gland cell line sample)
part of:CL:0002231 (epithelial cell of prostate),CL:0002622 (prostate stromal cell),CL:1000487 (smooth muscle cell of prostate)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002367 (prostate gland), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr6:42543450..42543455,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42543450..42543455, -
3.07e-86FFCP PHASE1:Mm9::chr12:114453231..114453265,-#_936940bfe1cfe55fe072487706e65fe2p@chr12:114453231..114453265, -
3.07e-86FFCP PHASE2:Mm9::chr16:20188895..20188904,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:20188895..20188904, +
3.07e-86FFCP PHASE1:Mm9::chr6:42548119..42548136,-#_936940bfe1cfe55fe072487706e65fe2p12@Fam115e
3.07e-86FFCP PHASE2:Mm9::chr1:72981474..72981498,+#_936940bfe1cfe55fe072487706e65fe2p@chr1:72981474..72981498, +
3.07e-86FFCP PHASE1:Mm9::chr4:152405146..152405150,+#_936940bfe1cfe55fe072487706e65fe2p@chr4:152405146..152405150, +
3.07e-86FFCP PHASE1:Mm9::chr16:20186617..20186622,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:20186617..20186622, +
3.07e-86FFCP PHASE1:Mm9::chr6:42547389..42547396,-#_936940bfe1cfe55fe072487706e65fe2p14@Fam115e
3.07e-86FFCP PHASE2:Mm9::chr6:122422716..122422728,-#_936940bfe1cfe55fe072487706e65fe2p15@Rimklb
3.07e-86FFCP PHASE2:Mm9::chr6:42537176..42537182,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42537176..42537182, -
3.07e-86FFCP PHASE1:Mm9::chr6:42541927..42541932,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42541927..42541932, -
3.07e-86FFCP PHASE1:Mm9::chr11:57320631..57320636,-#_936940bfe1cfe55fe072487706e65fe2p5@Fam114a2
3.07e-86FFCP PHASE2:Mm9::chr6:42547375..42547383,-#_936940bfe1cfe55fe072487706e65fe2p10@Fam115e
3.07e-86FFCP PHASE1:Mm9::chr6:42536830..42536841,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42536830..42536841, -
3.07e-86FFCP PHASE2:Mm9::chr6:42535901..42535907,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42535901..42535907, -
3.07e-86FFCP PHASE2:Mm9::chr12:93026806..93026816,-#_936940bfe1cfe55fe072487706e65fe2p12@Ston2
3.07e-86FFCP PHASE2:Mm9::chr12:114453231..114453265,-#_936940bfe1cfe55fe072487706e65fe2p@chr12:114453231..114453265, -
3.07e-86FFCP PHASE2:Mm9::chr4:121069181..121069190,-#_936940bfe1cfe55fe072487706e65fe2p@chr4:121069181..121069190, -
3.07e-86FFCP PHASE2:Mm9::chr5:33251992..33251995,+#_936940bfe1cfe55fe072487706e65fe2p@chr5:33251992..33251995, +
3.07e-86FFCP PHASE2:Mm9::chr16:20186617..20186622,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:20186617..20186622, +
3.07e-86FFCP PHASE2:Mm9::chr6:54242736..54242738,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:54242736..54242738, -
3.07e-86FFCP PHASE1:Mm9::chr6:42535757..42535772,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42535757..42535772, -
3.07e-86FFCP PHASE2:Mm9::chr6:42551615..42551622,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42551615..42551622, -
3.07e-86FFCP PHASE1:Mm9::chr9:36300946..36300953,-#_936940bfe1cfe55fe072487706e65fe2p@chr9:36300946..36300953, -
3.07e-86FFCP PHASE1:Mm9::chr6:42543996..42544003,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42543996..42544003, -
3.07e-86FFCP PHASE1:Mm9::chr12:93026806..93026816,-#_936940bfe1cfe55fe072487706e65fe2p12@Ston2
3.07e-86FFCP PHASE2:Mm9::chr4:102102677..102102684,+#_936940bfe1cfe55fe072487706e65fe2p@chr4:102102677..102102684, +
3.07e-86FFCP PHASE1:Mm9::chr1:73048139..73048141,+#_936940bfe1cfe55fe072487706e65fe2p@chr1:73048139..73048141, +
3.07e-86FFCP PHASE1:Mm9::chr6:42539866..42539870,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42539866..42539870, -
3.07e-86FFCP PHASE2:Mm9::chr6:42536009..42536044,+#_936940bfe1cfe55fe072487706e65fe2p@chr6:42536009..42536044, +
3.07e-86FFCP PHASE1:Mm9::chr2:137020090..137020093,+#_936940bfe1cfe55fe072487706e65fe2p@chr2:137020090..137020093, +
3.07e-86FFCP PHASE2:Mm9::chr6:42535739..42535752,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42535739..42535752, -
3.07e-86FFCP PHASE1:Mm9::chr6:42548966..42548969,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42548966..42548969, -
3.07e-86FFCP PHASE2:Mm9::chr2:137020090..137020093,+#_936940bfe1cfe55fe072487706e65fe2p@chr2:137020090..137020093, +
3.07e-86FFCP PHASE1:Mm9::chr6:57789909..57789916,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:57789909..57789916, -
3.07e-86FFCP PHASE1:Mm9::chr16:20186645..20186650,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:20186645..20186650, +
3.07e-86FFCP PHASE2:Mm9::chr11:57320631..57320636,-#_936940bfe1cfe55fe072487706e65fe2p5@Fam114a2
3.07e-86FFCP PHASE1:Mm9::chr6:42547401..42547411,-#_936940bfe1cfe55fe072487706e65fe2p9@Fam115e
3.07e-86FFCP PHASE2:Mm9::chr6:42539787..42539797,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42539787..42539797, -
3.07e-86FFCP PHASE1:Mm9::chr2:36098306..36098309,+#_936940bfe1cfe55fe072487706e65fe2p5@Ptgs1
3.07e-86FFCP PHASE2:Mm9::chr9:7867982..7867988,-#_936940bfe1cfe55fe072487706e65fe2p@chr9:7867982..7867988, -
3.07e-86FFCP PHASE2:Mm9::chr6:42547389..42547396,-#_936940bfe1cfe55fe072487706e65fe2p14@Fam115e
3.07e-86FFCP PHASE1:Mm9::chr1:72981474..72981498,+#_936940bfe1cfe55fe072487706e65fe2p@chr1:72981474..72981498, +
3.07e-86FFCP PHASE2:Mm9::chr6:22342065..22342073,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:22342065..22342073, -
3.07e-86FFCP PHASE2:Mm9::chr4:122366201..122366206,-#_936940bfe1cfe55fe072487706e65fe2p@chr4:122366201..122366206, -
3.07e-86FFCP PHASE2:Mm9::chr16:20186645..20186650,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:20186645..20186650, +
3.07e-86FFCP PHASE2:Mm9::chr6:42541927..42541932,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42541927..42541932, -
3.07e-86FFCP PHASE2:Mm9::chr8:126864466..126864469,+#_936940bfe1cfe55fe072487706e65fe2p@chr8:126864466..126864469, +
3.07e-86FFCP PHASE2:Mm9::chr6:42551847..42551862,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42551847..42551862, -
3.07e-86FFCP PHASE1:Mm9::chr8:126864466..126864469,+#_936940bfe1cfe55fe072487706e65fe2p@chr8:126864466..126864469, +
3.07e-86FFCP PHASE2:Mm9::chr6:42536830..42536841,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42536830..42536841, -
3.07e-86FFCP PHASE1:Mm9::chr6:54242736..54242738,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:54242736..54242738, -
3.07e-86FFCP PHASE1:Mm9::chr7:55002686..55002717,+#_936940bfe1cfe55fe072487706e65fe2p@chr7:55002686..55002717, +
3.07e-86FFCP PHASE2:Mm9::chr6:42543996..42544003,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42543996..42544003, -
3.07e-86FFCP PHASE1:Mm9::chr16:96752893..96752921,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:96752893..96752921, +
3.07e-86FFCP PHASE2:Mm9::chr6:42535757..42535772,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42535757..42535772, -
3.07e-86FFCP PHASE1:Mm9::chr6:42551615..42551622,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42551615..42551622, -
3.07e-86FFCP PHASE1:Mm9::chr6:42535984..42535996,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42535984..42535996, -
3.07e-86FFCP PHASE1:Mm9::chr16:20188864..20188875,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:20188864..20188875, +
3.07e-86FFCP PHASE1:Mm9::chr10:75355747..75355754,-#_936940bfe1cfe55fe072487706e65fe2p@chr10:75355747..75355754, -
3.07e-86FFCP PHASE2:Mm9::chr9:122970904..122970907,-#_936940bfe1cfe55fe072487706e65fe2p@chr9:122970904..122970907, -
3.07e-86FFCP PHASE2:Mm9::chr6:42539866..42539870,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42539866..42539870, -
3.07e-86FFCP PHASE1:Mm9::chr6:42535216..42535225,+#_936940bfe1cfe55fe072487706e65fe2p@chr6:42535216..42535225, +
3.07e-86FFCP PHASE2:Mm9::chr6:42547830..42547837,-#_936940bfe1cfe55fe072487706e65fe2p8@Fam115e
3.07e-86FFCP PHASE1:Mm9::chr5:33251992..33251995,+#_936940bfe1cfe55fe072487706e65fe2p@chr5:33251992..33251995, +
3.07e-86FFCP PHASE2:Mm9::chr9:36341608..36341609,-#_936940bfe1cfe55fe072487706e65fe2p@chr9:36341608..36341609, -
3.07e-86FFCP PHASE1:Mm9::chr7:55028223..55028250,+#_936940bfe1cfe55fe072487706e65fe2p@chr7:55028223..55028250, +
3.07e-86FFCP PHASE2:Mm9::chr2:80164541..80164545,+#_936940bfe1cfe55fe072487706e65fe2p@chr2:80164541..80164545, +
3.07e-86FFCP PHASE1:Mm9::chr9:122970904..122970907,-#_936940bfe1cfe55fe072487706e65fe2p@chr9:122970904..122970907, -
3.07e-86FFCP PHASE2:Mm9::chr16:20188864..20188875,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:20188864..20188875, +
3.07e-86FFCP PHASE1:Mm9::chr19:11353179..11353189,-#_936940bfe1cfe55fe072487706e65fe2p@chr19:11353179..11353189, -
3.07e-86FFCP PHASE1:Mm9::chr6:122422716..122422728,-#_936940bfe1cfe55fe072487706e65fe2p15@Rimklb
3.07e-86FFCP PHASE2:Mm9::chrX:75093379..75093383,+#_936940bfe1cfe55fe072487706e65fe2p@chrX:75093379..75093383, +
3.07e-86FFCP PHASE1:Mm9::chrX:75093379..75093383,+#_936940bfe1cfe55fe072487706e65fe2p@chrX:75093379..75093383, +
3.07e-86FFCP PHASE2:Mm9::chr7:55002686..55002717,+#_936940bfe1cfe55fe072487706e65fe2p@chr7:55002686..55002717, +
3.07e-86FFCP PHASE1:Mm9::chr6:42547300..42547314,-#_936940bfe1cfe55fe072487706e65fe2p7@Fam115e
3.07e-86FFCP PHASE1:Mm9::chrX:137642090..137642093,-#_936940bfe1cfe55fe072487706e65fe2p8@Col4a6
3.07e-86FFCP PHASE1:Mm9::chr6:22342065..22342073,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:22342065..22342073, -
3.07e-86FFCP PHASE2:Mm9::chr1:37769602..37769611,-#_936940bfe1cfe55fe072487706e65fe2p@chr1:37769602..37769611, -
3.07e-86FFCP PHASE2:Mm9::chr9:7699504..7699515,+#_936940bfe1cfe55fe072487706e65fe2p@chr9:7699504..7699515, +
3.07e-86FFCP PHASE1:Mm9::chr7:55008002..55008008,-#_936940bfe1cfe55fe072487706e65fe2p@chr7:55008002..55008008, -
3.07e-86FFCP PHASE2:Mm9::chr10:75355747..75355754,-#_936940bfe1cfe55fe072487706e65fe2p@chr10:75355747..75355754, -
3.07e-86FFCP PHASE1:Mm9::chr1:37769602..37769611,-#_936940bfe1cfe55fe072487706e65fe2p@chr1:37769602..37769611, -
3.07e-86FFCP PHASE2:Mm9::chr6:134172953..134172958,+#_936940bfe1cfe55fe072487706e65fe2p@chr6:134172953..134172958, +
3.07e-86FFCP PHASE1:Mm9::chr6:42536469..42536478,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42536469..42536478, -
3.07e-86FFCP PHASE1:Mm9::chr6:42551847..42551862,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42551847..42551862, -
3.07e-86FFCP PHASE1:Mm9::chr9:7699504..7699515,+#_936940bfe1cfe55fe072487706e65fe2p@chr9:7699504..7699515, +
3.07e-86FFCP PHASE1:Mm9::chr4:102102677..102102684,+#_936940bfe1cfe55fe072487706e65fe2p@chr4:102102677..102102684, +
3.07e-86FFCP PHASE1:Mm9::chr6:42536000..42536005,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42536000..42536005, -
3.07e-86FFCP PHASE1:Mm9::chr16:20188882..20188884,+#_936940bfe1cfe55fe072487706e65fe2p@chr16:20188882..20188884, +
3.07e-86FFCP PHASE2:Mm9::chr7:55028223..55028250,+#_936940bfe1cfe55fe072487706e65fe2p@chr7:55028223..55028250, +
3.07e-86FFCP PHASE1:Mm9::chr9:36341608..36341609,-#_936940bfe1cfe55fe072487706e65fe2p@chr9:36341608..36341609, -
3.07e-86FFCP PHASE2:Mm9::chr19:11353179..11353189,-#_936940bfe1cfe55fe072487706e65fe2p@chr19:11353179..11353189, -
3.07e-86FFCP PHASE2:Mm9::chr6:42548119..42548136,-#_936940bfe1cfe55fe072487706e65fe2p12@Fam115e
3.07e-86FFCP PHASE1:Mm9::chr6:42543450..42543455,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42543450..42543455, -
3.07e-86FFCP PHASE1:Mm9::chr6:134172953..134172958,+#_936940bfe1cfe55fe072487706e65fe2p@chr6:134172953..134172958, +
3.07e-86FFCP PHASE1:Mm9::chr4:121069181..121069190,-#_936940bfe1cfe55fe072487706e65fe2p@chr4:121069181..121069190, -
3.07e-86FFCP PHASE2:Mm9::chr6:42547401..42547411,-#_936940bfe1cfe55fe072487706e65fe2p9@Fam115e
3.07e-86FFCP PHASE1:Mm9::chr6:42537176..42537182,-#_936940bfe1cfe55fe072487706e65fe2p@chr6:42537176..42537182, -
3.07e-86FFCP PHASE2:Mm9::chr9:36300946..36300953,-#_936940bfe1cfe55fe072487706e65fe2p@chr9:36300946..36300953, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002367&oldid=1835747"