NonredundantMotifs:89

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known89
• db :HOCOMOCO
• Id :TYY1_f2
• name  :
• score :0.30566608958087693
  
• External refs:

EntrezGene:7528
UniProt:7528

• Internal refs:

EntrezGene:7528

Motif matrix

P0 A C G T 1 355.1164179681543 872.9135931285866 229.05286307430117 142.43630851119804 2 1453.8878953041276 39.405312043040794 60.76718830742915 45.458787027639595 3 1437.2301000628477 59.07278819398952 41.03769678615428 62.1785976392452 4 452.2681057053963 264.446438084949 752.2975098199706 130.50712907192346 5 1589.7152757844658 5.158343788844059 0.0 4.64556310892588 6 2.683134803964476 0.0 0.8219170657205994 1596.0141308125508 7 1.751490774810144 0.0 1597.7676919074256 0.0 8 45.58822914749756 1.0206677919401903 1522.8715407647107 30.038744978087912 9 205.01100167817054 1217.7380393283668 20.432130529399814 156.33801114630236 10 162.0336025293721 313.46325125529927 934.2913102164242 189.73101868114384 11 215.16543492570273 185.59382165677596 998.427142418638 200.33278368112224 12 217.483463797109 1043.9855089015196 161.5696235328511 176.48058645075952