NonredundantMotifs:23

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :non-redundant23
• db :JASPAR
• Id :MA0003.1
• name :TFAP2A
• score :3.387458406400475
  
• External refs:

EntrezGene:7020
UniProt:7020

• Internal refs:

EntrezGene:7020

Motif matrix
P0 A C G T 1 0 0 185 0 2 0 185 0 0 3 0 185 0 0 4 22 71 46 46 5 19 57 61 48 6 55 44 67 19 7 53 30 91 11 8 19 16 137 13 9 9 78 79 19