EntrezGene:18002

Symbol:	Nedd8
Description:	neural precursor cell expressed, developmentally down-regulated gene 8
Synonyms:	Rub1
Species:	Mouse (Mus musculus)
Xrefs:	EntrezGene:18002 MGI:97301 Ensembl:ENSMUSG00000010376
Associated motifs:	NA
Transcripton Factor?:	No

TSS regions

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Mm9::chr14:56290695..56290706,-	p3@Nedd8
Mm9::chr14:56290710..56290755,-	p1@Nedd8
Mm9::chr14:56290901..56290962,-	p2@Nedd8
Mm9::chr14:56290973..56290984,-	p4@Nedd8
Mm9::chr14:56291006..56291016,-	p5@Nedd8
Mm9::chr14:56291030..56291045,-	p6@Nedd8

View on UCSC genome browser

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TSS expression

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Sample	p1@Nedd8	p2@Nedd8	p3@Nedd8	p4@Nedd8	p5@Nedd8
Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7	0.00	0.00	0.00	0.00	0.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5	97.71	15.01	8.72	0.70	1.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6	105.56	11.37	5.46	0.00	0.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I3	85.60	6.35	7.86	0.91	0.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I4	65.62	6.51	5.01	0.00	0.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7	85.79	15.28	7.05	0.34	0.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8	89.01	16.59	6.54	0.47	0.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9	87.29	14.98	6.97	0.00	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7	38.15	18.44	3.80	0.42	0.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2	42.83	17.09	3.28	0.23	0.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6	81.67	64.04	5.31	0.00	0.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1	88.87	51.37	4.47	0.40	0.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4	63.86	17.29	7.19	0.17	0.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8	66.53	18.53	6.99	0.26	0.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A1	90.27	28.65	7.66	1.00	0.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3	73.90	23.28	5.67	0.81	0.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A5	88.84	20.29	7.70	0.00	0.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2	70.03	32.33	7.57	0.16	0.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4	68.15	32.08	4.25	0.27	0.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6	84.45	33.10	3.82	0.42	0.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3	76.96	23.47	7.23	1.28	2.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2	117.56	26.71	13.21	0.50	0.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9	143.66	42.05	20.63	0.26	0.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1	122.07	24.16	10.88	0.96	0.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2	115.85	24.55	12.39	0.46	0.23
GP2+ M cell, pool1.CNhs13228.11845-124H9	144.71	15.50	17.23	0.57	0.57
GP2+ M cell, pool2.CNhs13231.11846-124I1	142.58	17.66	17.23	2.15	0.86
GP2+ M cell, pool3.CNhs13240.11847-124I2	120.02	19.18	12.50	0.86	0.22
Ileum epithelium, pool1.CNhs13199.10252-104B9	111.35	16.15	14.06	0.00	0.00
Ileum epithelium, pool2.CNhs13232.10253-104C1	108.88	20.16	6.80	0.25	0.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8	145.01	29.05	9.31	0.89	0.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I3	48.90	24.13	2.54	0.64	0.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G6	52.90	20.91	1.85	0.00	0.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E9	95.09	0.00	0.00	0.00	0.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5	116.41	23.40	5.78	0.29	0.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6	121.85	26.93	10.64	0.17	0.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7	106.98	25.52	11.03	0.41	0.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8	149.00	10.88	20.09	0.84	0.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1	226.59	19.53	16.41	0.00	0.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3	161.77	11.52	18.32	0.52	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9	160.59	5.88	23.53	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2	172.13	14.34	15.71	0.00	0.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4	184.49	11.17	17.48	0.00	0.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8	139.62	14.98	15.11	0.13	0.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9	141.32	15.31	14.70	0.30	0.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3	128.67	16.34	16.15	0.18	0.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7	292.61	35.21	27.38	0.78	0.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2	262.50	37.28	25.73	0.00	0.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8	236.38	29.88	22.85	0.00	0.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3	223.01	24.89	26.44	0.78	0.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C4	169.80	17.78	15.82	0.70	0.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C4	230.00	31.63	30.19	0.00	0.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2	84.73	29.87	6.04	0.67	0.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9	72.54	17.41	7.98	0.00	0.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1	54.11	24.53	5.04	0.00	0.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1	157.96	19.55	19.55	1.03	0.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1	132.66	13.75	12.32	0.00	0.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5	193.38	13.41	25.78	0.00	0.00
Mouse Granule cells, donor1.CNhs12131.11713-123C3	157.60	34.60	17.80	0.00	0.00
Mouse Granule cells, donor2.CNhs12357.11731-123E3	179.33	30.15	28.04	1.06	0.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7	162.89	40.57	18.38	0.63	0.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6	239.22	42.02	17.62	0.34	0.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1	231.22	28.46	31.13	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7	318.56	37.35	40.95	0.90	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7	349.07	39.55	29.67	0.00	0.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2	343.87	34.81	35.52	0.00	0.00
Mouse Microglia, donor1.CNhs12629.11718-123C8	212.42	41.64	32.06	0.30	0.00
Mouse Microglia, donor2.CNhs12634.11736-123E8	260.12	59.55	48.80	1.15	0.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5	134.59	21.36	14.83	0.21	0.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F5	144.19	23.36	14.72	0.41	0.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D9	165.11	27.76	10.31	0.21	0.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1	204.53	40.28	27.71	0.29	0.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5	216.67	41.52	25.84	0.88	0.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D2	162.91	28.54	14.45	0.37	0.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F2	157.67	29.04	17.83	0.19	0.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6	170.97	29.42	22.06	0.00	0.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3	137.64	28.63	6.61	0.00	0.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3	146.07	24.13	13.53	0.13	0.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7	156.22	23.81	14.90	0.46	0.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4	153.52	31.13	17.01	0.66	0.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4	165.41	30.83	22.32	0.37	0.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8	137.00	25.52	15.11	0.00	0.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4	238.42	31.27	21.22	0.28	0.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5	226.79	42.21	19.13	0.56	0.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6	152.03	22.46	17.27	0.61	0.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6	119.91	27.70	14.44	0.29	0.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6	146.79	28.19	16.52	0.71	0.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1	130.85	32.06	12.30	0.19	0.37
Mouse Schwann, donor1.CNhs12507.11728-123D9	145.77	32.56	13.86	0.91	0.30
Mouse Schwann, donor2.CNhs12573.11746-123F9	141.02	24.79	14.51	0.68	0.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3	52.76	13.91	6.38	0.29	0.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7	102.39	11.19	12.05	0.00	0.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C4	117.64	21.08	12.24	0.00	0.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C8	136.54	7.02	12.95	0.00	0.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F4	129.96	5.85	14.94	0.00	0.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F6	120.97	8.06	12.99	0.00	0.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7	100.98	11.38	10.67	0.00	0.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7	178.27	19.77	20.62	0.68	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3	204.19	30.14	22.86	0.26	0.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8	185.86	22.61	21.55	0.35	0.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6	144.22	20.00	16.90	0.28	0.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1	121.91	26.95	16.68	1.28	0.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8	66.25	15.29	0.00	0.00	0.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6	49.77	21.33	0.00	0.00	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1	116.04	30.31	13.21	0.65	0.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2	108.18	33.19	10.89	0.76	0.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3	126.38	34.88	12.13	1.52	0.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6	109.16	12.22	9.36	0.11	0.69
accessory axillary lymph node, adult.CNhs10475.1063-29H9	48.16	16.05	3.88	0.00	0.00
adrenal gland, adult.CNhs10508.49-24D7	80.46	8.02	6.23	0.00	0.00
adrenal gland, embryo E14.CNhs11038.406-44C5	101.66	25.50	8.85	1.39	0.00
adrenal gland, embryo E16.CNhs11004.1254-43D6	118.13	21.92	7.31	0.30	0.61
adrenal gland, embryo E17.CNhs11043.1263-45I1	110.46	18.22	9.92	0.92	0.00
adrenal gland, embryo E18.CNhs11026.1262-18F5	130.98	21.25	11.91	0.90	0.15
adrenal gland, neonate N00.CNhs11191.1311-23C1	76.43	16.58	6.58	0.47	0.24
adrenal gland, neonate N25.CNhs11223.1377-27I3	80.80	12.44	6.16	0.25	0.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8	71.69	12.61	7.91	0.00	0.00
aorta, adult.CNhs10498.46-23H1	61.45	4.63	6.36	0.00	0.00
bone (os femoris), adult.CNhs10483.56-12G2	73.42	9.73	17.69	0.00	0.00
bone (os femoris), neonate N02.CNhs11227.1985-43F5	74.25	13.26	4.85	0.32	0.16
bone (os femoris), neonate N16.CNhs11225.1525-43A6	59.41	11.93	3.98	0.44	0.00
bone (os femoris), neonate N20.CNhs11195.1350-25C3	73.22	20.85	3.88	0.00	0.00
cecum, adult.CNhs10467.37-13H4	93.20	18.64	9.32	0.00	0.00
cerebellum, adult.CNhs10494.15-8B2	82.27	11.42	2.64	0.00	0.00
cerebellum, neonate N30.CNhs11135.1395-42I2	133.84	13.82	9.63	0.84	0.00
colon, adult.CNhs10468.36-18H7	101.93	16.60	9.20	0.00	0.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7	96.81	24.32	10.90	0.24	0.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1	197.37	51.59	16.20	0.60	0.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4	116.65	28.97	12.20	0.13	0.25
corpora quadrigemina, adult.CNhs10501.16-22A4	103.36	13.63	8.09	0.15	0.00
corpus striatum, adult.CNhs10487.19-21D8	103.40	20.13	7.32	0.00	0.00
corpus striatum, neonate N00.CNhs11226.630-43F1	90.35	20.23	5.91	0.13	0.00
cortex, adult.CNhs10473.12-14D5	100.30	15.47	7.65	0.17	0.00
cortex, neonate N30.CNhs11107.1392-42F2	100.50	18.41	6.14	0.00	0.00
diencephalon, adult.CNhs10482.20-12F2	112.41	20.36	10.39	0.00	0.00
diencephalon, neonate N30.CNhs11201.1388-42B2	95.88	19.14	6.81	0.49	0.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1	83.81	13.54	8.05	0.20	0.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2	77.51	12.57	8.21	0.00	0.37
epididymis, adult.CNhs10490.58-23B2	144.56	16.68	17.19	0.00	0.00
eyeball, adult.CNhs10484.31-12G4	77.02	5.47	6.10	0.00	0.00
eyeball, embryo E12.CNhs11016.345-16C6	114.77	19.78	14.44	0.00	0.13
eyeball, embryo E14.CNhs10521.399-16E2	156.56	24.37	18.62	0.46	0.00
eyeball, embryo E15.CNhs10593.426-16C9	122.62	18.91	12.60	0.90	0.00
eyeball, embryo E17.CNhs11023.1261-18D4	116.49	15.22	9.34	0.45	0.00
eyeball, neonate N00.CNhs11207.633-15C6	71.57	11.43	4.49	0.27	0.00
eyeball, neonate N01.CNhs11140.1532-43E7	100.95	15.76	9.22	0.00	0.00
eyeball, neonate N02.CNhs11205.1551-44G8	82.93	15.55	7.50	0.19	0.00
eyeball, neonate N16.CNhs11188.777-19A2	83.82	8.02	9.05	0.26	0.26
forelimb, embryo E11.CNhs10596.335-25E2	124.17	32.12	14.87	0.65	0.00
forelimb, embryo E12.CNhs10600.359-14H2	97.20	19.48	11.16	0.38	0.00
forelimb, embryo E13.CNhs10589.384-1E2	100.29	19.53	14.60	0.70	0.00
forelimb, embryo E14.CNhs10577.413-26A8	119.46	21.70	12.27	0.00	0.00
forelimb, embryo E15.CNhs11007.437-20E7	103.16	9.73	12.51	0.56	0.00
forelimb, embryo E17.CNhs10598.1517-43C4	78.01	9.75	6.27	0.35	0.00
forelimb, embryo E18.CNhs11008.1520-43B5	86.43	11.32	10.08	0.00	0.00
gonad, embryo E13.CNhs11044.1564-45I6	85.78	19.51	8.96	0.20	0.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8	212.77	46.35	18.96	1.40	0.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2	147.46	44.26	13.12	0.26	0.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5	103.44	27.85	10.80	0.00	0.00
heart, embryo E11.CNhs10586.331-24E9	108.12	23.61	10.77	0.83	0.00
heart, embryo E12.CNhs11015.353-12F5	118.44	20.64	10.08	1.17	0.00
heart, embryo E13.CNhs11013.376-3I9	139.37	28.99	10.62	0.18	0.18
heart, embryo E14.CNhs10597.403-26D4	118.85	21.54	9.47	0.71	0.24
heart, embryo E15.CNhs11017.431-16C8	131.83	18.50	9.44	0.39	0.00
heart, embryo E16.CNhs11021.457-17C6	138.38	22.06	13.27	1.23	0.00
heart, embryo E17.CNhs11025.479-18E5	129.29	15.35	10.46	0.00	0.23
heart, embryo E18.CNhs11030.1283-20G3	120.19	19.85	9.12	0.27	0.27
heart, neonate N00.CNhs11213.639-21E3	115.25	17.28	5.72	0.47	0.00
heart, neonate N03.CNhs11221.1349-25I2	99.07	18.60	6.09	0.00	0.00
heart, neonate N10.CNhs11118.749-24G1	128.38	15.10	10.51	0.49	0.00
heart, neonate N16.CNhs11209.782-15G1	92.01	8.27	6.32	0.08	0.08
heart, neonate N20.CNhs11127.821-26I6	107.46	11.26	7.75	0.00	0.00
heart, neonate N25.CNhs11196.1351-25D3	100.99	7.03	6.37	0.00	0.00
heart, neonate N30.CNhs11202.1390-42D2	108.98	11.68	6.44	0.13	0.00
hippocampus, adult.CNhs10478.13-16E8	100.31	15.77	6.94	0.21	0.00
hippocampus, neonate N00.CNhs11228.627-43G1	90.04	17.60	7.10	0.31	0.00
intestinal mucosa, adult.CNhs10506.860-29I3	105.07	5.95	8.59	0.00	0.00
intestine, adult.CNhs10496.178-9A3	86.48	17.72	6.08	0.26	0.00
intestine, embryo E12.CNhs11019.1251-16I5	111.98	21.97	10.45	0.21	0.00
intestine, embryo E13.CNhs11010.381-16D5	100.09	23.92	9.06	0.00	0.23
intestine, embryo E15.CNhs10602.976-16D8	89.18	15.59	6.70	0.77	0.00
intestine, embryo E16.CNhs10585.463-22H4	80.88	13.11	8.27	0.40	0.40
intestine, embryo E17.CNhs10582.482-18D3	89.62	14.01	10.01	0.22	0.00
intestine, embryo E18.CNhs10526.1289-20F7	111.85	14.65	9.89	0.19	0.00
intestine, neonate N00.CNhs11126.644-26D1	98.70	11.86	5.69	0.00	0.00
intestine, neonate N01.CNhs11192.1322-23E9	82.02	12.85	8.73	0.00	0.00
intestine, neonate N06.CNhs11102.688-20B8	104.56	14.07	9.80	0.25	0.00
intestine, neonate N07.CNhs11095.720-20F2	91.32	16.31	8.95	0.00	0.20
intestine, neonate N10.CNhs11098.755-23A5	85.20	10.72	6.04	0.39	0.00
intestine, neonate N20.CNhs11187.827-18D1	105.16	12.58	4.49	0.90	0.00
intestine, neonate N25.CNhs11121.1352-25E3	108.29	12.32	7.56	0.43	0.00
intestine, neonate N30.CNhs11131.1384-42G1	88.42	11.35	7.77	0.40	0.00
kidney, embryo E14.CNhs10606.411-4I9	129.35	31.67	14.04	0.76	0.00
kidney, embryo E15.CNhs10997.434-16F8	104.99	22.62	8.91	0.46	0.23
kidney, embryo E16.CNhs10584.464-22A5	71.01	6.76	15.78	0.00	0.00
kidney, embryo E17.CNhs11028.483-18I2	103.25	17.72	11.40	0.20	0.00
kidney, embryo E18.CNhs11001.1288-20C7	92.52	10.67	9.31	0.58	0.00
kidney, neonate N00.CNhs11214.646-21G7	65.30	10.94	6.17	0.28	0.00
kidney, neonate N10.CNhs11206.758-6D5	71.27	8.60	7.40	0.25	0.00
kidney, neonate N20.CNhs11113.832-19I1	98.75	6.94	8.71	0.00	0.00
kidney, neonate N25.CNhs11122.1353-25F3	96.71	8.01	11.62	0.00	0.00
kidney, neonate N30.CNhs11203.1385-42H1	94.15	6.05	8.88	0.25	0.00
liver, adult pregnant day01.CNhs10466.508-5B2	106.72	4.74	8.89	0.00	0.30
liver, embryo E12.CNhs10601.355-15F8	80.59	21.19	6.51	0.17	0.67
liver, embryo E13.CNhs10524.378-3H6	99.07	18.08	4.52	0.79	0.59
liver, embryo E14.CNhs10594.409-16E1	90.62	20.46	4.72	0.67	0.00
liver, embryo E15.CNhs10520.433-16D7	87.43	15.01	5.68	0.61	0.41
liver, embryo E16.CNhs10523.462-17F5	93.82	12.54	6.99	0.48	0.00
liver, embryo E17.CNhs10510.481-18A3	107.71	12.99	7.89	0.00	0.00
liver, embryo E18.CNhs10579.499-43G4	86.88	8.92	8.63	0.86	0.29
liver, neonate N00.CNhs11117.641-24F4	105.55	10.54	8.43	0.16	0.32
liver, neonate N03.CNhs11123.1345-25G2	107.90	12.36	12.08	0.00	0.27
liver, neonate N06.CNhs11101.684-20A8	44.57	1.44	5.75	0.00	0.00
liver, neonate N07.CNhs11103.716-20H2	98.62	9.30	5.95	1.12	0.00
liver, neonate N10.CNhs11115.751-24B9	104.22	10.61	9.36	0.62	0.00
liver, neonate N20.CNhs11220.823-25A3	92.95	8.34	6.06	0.00	0.00
liver, neonate N25.CNhs11198.1368-26H1	88.44	8.97	9.33	0.36	0.00
liver, neonate N30.CNhs11106.1382-42D1	92.15	7.24	8.20	0.00	0.00
lung, adult.CNhs10474.28-22B1	83.88	7.57	7.02	0.37	0.00
lung, embryo E12.CNhs10522.354-16G2	149.89	23.69	15.54	0.57	0.00
lung, embryo E14.CNhs10604.404-26F8	105.93	15.48	10.43	0.65	0.16
lung, embryo E15.CNhs11020.432-17C5	110.84	23.42	9.51	0.51	0.17
lung, embryo E16.CNhs10998.458-17B6	103.26	19.71	10.80	0.00	0.00
lung, embryo E17.CNhs10605.480-44A6	81.24	12.23	6.87	0.34	0.00
lung, embryo E18.CNhs10583.1287-20I6	72.37	12.38	10.95	0.24	0.00
lung, neonate N00.CNhs11224.640-42C6	50.93	6.83	6.05	0.20	0.00
lung, neonate N06.CNhs11212.683-20E5	67.15	10.72	5.36	0.16	0.00
lung, neonate N07.CNhs11111.715-19A3	66.22	11.29	8.86	0.22	0.00
lung, neonate N10.CNhs11219.750-23E6	47.04	11.16	4.62	0.00	0.00
lung, neonate N20.CNhs11109.822-18A4	86.03	9.67	6.39	0.00	0.00
lung, neonate N25.CNhs11119.1359-25C7	91.18	10.02	6.22	0.35	0.17
lung, neonate N30.CNhs11133.1394-42H2	76.66	8.97	6.65	0.14	0.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1	120.63	13.57	18.09	0.00	0.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A1	120.75	17.95	12.51	0.54	0.00
mammary gland, adult lactating day02.CNhs10480.595-22B6	85.57	16.72	9.84	0.98	0.00
mammary gland, adult pregnant day19.CNhs10476.588-5H2	84.71	7.17	8.28	0.00	0.28
medulla oblongata, adult.CNhs10477.17-12C2	126.35	20.55	11.08	0.80	0.16
medulla oblongata, neonate N30.CNhs11200.1396-42A3	106.66	20.28	8.20	0.23	0.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7	70.16	15.25	4.43	0.66	0.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2	104.52	10.60	9.34	0.00	0.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E1	134.41	29.34	13.88	0.00	0.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E2	155.00	32.02	16.01	0.00	0.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3	124.73	21.54	13.57	0.65	0.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D7	113.51	21.03	13.38	0.24	0.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8	116.08	19.83	9.80	0.45	0.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9	113.23	22.08	5.10	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D4	127.52	21.86	11.74	0.00	0.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D5	104.04	19.29	14.32	0.88	0.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6	109.49	20.95	5.14	0.00	0.00
olfactory brain, adult.CNhs10489.18-22I9	83.22	12.85	6.75	0.00	0.00
ovary, adult.CNhs10507.91-2I7	69.98	8.94	6.10	0.14	0.00
ovary, embryo E18.CNhs11040.505-44H7	100.61	17.81	9.62	0.53	0.00
ovary, neonate N00.CNhs11217.1299-22I4	71.83	15.64	6.35	0.00	0.00
oviduct, adult pregnant day01.CNhs10500.988-6G6	64.67	8.41	5.44	0.16	0.00
pancreas, adult.CNhs10486.34-16E4	91.59	5.31	6.64	0.00	0.00
pancreas, embryo E14.CNhs11012.405-44F4	105.37	24.04	11.17	1.21	0.00
pancreas, embryo E15.CNhs11042.1556-45F2	100.37	27.21	7.56	0.60	0.00
pancreas, embryo E16.CNhs11003.460-26E5	105.62	16.60	8.30	0.19	0.00
pancreas, embryo E17.CNhs10599.1558-45G3	100.70	10.93	7.97	0.00	0.00
pancreas, embryo E18.CNhs10580.1535-43I7	91.31	8.61	10.76	0.31	0.00
pancreas, neonate N00.CNhs11105.645-26G9	62.54	14.21	2.84	0.00	0.00
pancreas, neonate N01.CNhs11138.1531-43D7	78.16	10.18	5.82	0.00	0.00
pancreas, neonate N02.CNhs11139.1539-43D8	89.84	6.42	8.20	0.00	0.00
pancreas, neonate N16.CNhs11136.787-43B6	75.85	7.27	8.22	0.00	0.00
pancreas, neonate N25.CNhs11094.1555-45E2	81.17	8.43	2.11	0.00	0.00
pancreas, neonate N30.CNhs11182.1548-44H5	76.32	3.09	8.25	1.03	0.00
pituitary gland, adult.CNhs10493.21-1G8	70.81	4.43	8.17	0.34	0.00
pituitary gland, embryo E12.CNhs11018.346-16E6	118.84	21.61	10.44	0.18	0.18
pituitary gland, embryo E13.CNhs11009.370-44C7	122.24	23.41	12.68	0.39	0.13
pituitary gland, embryo E14.CNhs11037.398-44A5	86.81	13.72	6.43	0.00	0.21
pituitary gland, embryo E15.CNhs10592.427-16B9	76.43	14.01	8.33	0.35	0.18
pituitary gland, embryo E16.CNhs11036.449-43F6	65.46	14.27	7.49	0.00	0.00
pituitary gland, embryo E17.CNhs11039.1265-44F5	86.06	13.82	9.05	0.16	0.16
pituitary gland, neonate N00.CNhs11190.1308-22E9	46.89	11.87	6.39	0.00	0.30
placenta, adult pregnant day10.CNhs10472.539-13I7	83.31	18.07	8.68	0.94	0.23
placenta, adult pregnant day17.CNhs10464.577-18G3	88.76	12.92	12.07	1.06	0.42
prostate, adult.CNhs10470.859-1F8	85.12	9.92	7.06	0.00	0.00
skin, adult.CNhs10492.30-1C3	63.48	8.41	6.10	0.00	0.00
skin, neonate N00.CNhs11124.650-25G4	60.23	8.23	6.46	0.00	0.00
skin, neonate N03.CNhs11215.662-22H3	58.81	9.35	4.70	0.36	0.00
skin, neonate N06.CNhs11097.693-20I5	65.30	11.10	5.73	0.12	0.00
skin, neonate N10.CNhs11108.762-6C4	48.09	9.36	3.45	0.33	0.00
small intestine, neonate N16.CNhs11114.790-21I1	85.40	11.08	8.45	0.00	0.00
spinal cord, adult.CNhs10505.24-13C9	104.39	19.47	10.20	0.93	0.19
spleen, adult.CNhs10465.25-2G2	85.61	14.87	6.83	0.34	0.00
spleen, embryo E16.CNhs11035.461-43C1	88.54	15.07	7.64	0.21	0.21
spleen, embryo E18.CNhs11011.1271-21F2	82.23	20.37	7.22	0.93	0.37
spleen, neonate N10.CNhs11116.752-24D1	91.55	16.01	4.90	0.19	0.00
spleen, neonate N20.CNhs11112.824-19H1	90.63	18.32	6.29	0.27	0.55
spleen, neonate N25.CNhs11099.1354-25G3	78.47	20.13	4.35	0.69	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6	77.68	14.45	9.52	0.34	0.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9	79.07	13.86	9.66	0.28	0.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3	74.49	14.93	8.43	0.69	0.00
stomach, adult.CNhs10503.33-1H6	147.97	10.50	14.32	0.95	0.00
stomach, embryo E12.CNhs10588.356-43E3	103.60	17.71	11.23	0.00	0.47
stomach, embryo E15.CNhs10603.1252-16G8	94.34	16.27	9.76	0.61	0.20
stomach, embryo E16.CNhs11022.459-17D4	107.14	18.25	7.99	0.43	0.11
stomach, embryo E17.CNhs11006.1035-18D5	105.38	13.17	8.36	0.21	0.21
stomach, embryo E18.CNhs10999.1286-20C6	106.34	16.38	9.17	0.22	0.22
stomach, neonate N03.CNhs11193.1340-24B8	87.12	9.17	7.69	0.27	0.00
stomach, neonate N07.CNhs11210.718-18A9	64.47	9.17	6.20	0.17	0.00
stomach, neonate N25.CNhs11104.1355-25E4	108.89	10.47	8.11	0.26	0.00
stomach, neonate N30.CNhs11134.1386-42I1	85.42	12.83	10.76	0.00	0.00
submandibular gland, adult.CNhs10469.59-29C1	86.99	8.70	8.08	0.00	0.00
testis, adult.CNhs10504.57-7G5	73.84	78.92	3.95	11.84	21.42
testis, embryo E13.CNhs11031.389-23F5	84.78	18.09	9.72	1.05	0.00
testis, embryo E15.CNhs11034.443-27C5	109.37	22.01	10.59	1.32	0.17
testis, embryo E16.CNhs11033.470-26G5	72.34	15.75	6.81	0.97	0.00
testis, embryo E17.CNhs11029.486-18I5	96.74	20.92	7.23	0.13	0.39
testis, embryo E18.CNhs11027.503-18G5	86.67	16.90	10.31	0.51	0.84
testis, neonate N00.CNhs11189.1300-22B7	65.02	16.78	7.39	0.70	0.12
testis, neonate N07.CNhs11222.726-26I4	55.34	25.00	6.38	0.39	0.13
testis, neonate N10.CNhs11204.763-44D9	62.08	39.11	6.71	1.36	0.31
testis, neonate N20.CNhs11110.839-18H3	67.89	67.89	5.80	4.35	8.94
testis, neonate N30.CNhs11130.1391-42E2	55.88	45.80	3.74	4.61	7.78
thymus, adult.CNhs10471.38-12B5	94.17	22.44	8.22	0.32	0.00
thymus, embryo E14.CNhs11041.402-44I4	108.26	29.60	8.31	1.22	0.41
thymus, embryo E15.CNhs11005.430-45I2	113.08	27.94	9.55	0.82	0.21
thymus, embryo E16.CNhs11002.456-26C5	109.91	32.61	7.41	0.52	0.13
thymus, embryo E17.CNhs10581.478-18C1	82.17	25.42	6.27	0.36	0.36
thymus, embryo E18.CNhs10595.1273-19G4	82.06	24.04	7.55	0.60	0.00
thymus, neonate N02.CNhs11181.1541-43F8	65.63	26.68	3.97	0.24	0.12
thymus, neonate N03.CNhs11137.2104-43C7	83.44	26.73	5.91	0.44	0.30
thymus, neonate N06.CNhs11197.681-26C4	72.49	27.16	6.76	0.30	0.00
thymus, neonate N07.CNhs11211.713-19D3	61.12	26.98	4.04	0.53	0.15
thymus, neonate N10.CNhs11194.748-24E4	63.12	23.09	4.23	0.20	0.00
thymus, neonate N20.CNhs11186.820-7A2	60.42	21.93	4.78	0.68	0.00
thymus, neonate N25.CNhs11125.1362-25G7	72.83	20.78	5.48	0.48	0.29
thymus, neonate N30.CNhs11132.1393-42G2	68.96	18.47	6.08	0.23	0.00
tongue, adult.CNhs10499.32-1B4	78.90	8.16	8.16	0.23	0.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3	75.25	87.24	10.88	1.55	0.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7	75.27	104.52	6.28	3.95	1.61
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5	84.78	76.89	11.42	2.85	0.67
urinary bladder, adult.CNhs10481.879-12E4	77.86	8.31	4.83	0.00	0.00
uterus, adult pregnant day19.CNhs10497.590-15F5	98.16	9.20	9.20	0.38	0.00
uterus, adult.CNhs10509.92-27E5	85.71	8.79	6.04	0.00	0.00
vagina, adult.CNhs10502.89-27D5	73.96	9.86	9.43	0.43	0.00
vesicular gland, adult.CNhs10491.51-27F8	71.22	7.52	10.03	0.00	0.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1	145.71	29.93	12.99	0.56	0.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2	156.51	32.22	11.51	0.46	0.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3	144.37	28.64	8.59	0.57	0.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7	99.85	18.39	10.65	0.34	0.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4	154.83	34.94	10.28	0.00	0.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5	128.42	23.42	6.80	0.00	0.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6	155.93	28.35	15.53	0.00	0.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7	139.15	20.71	14.41	0.45	0.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8	152.26	20.84	13.59	0.45	0.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9	136.69	28.48	9.84	0.00	0.00
whole body, embryo E11.CNhs11014.324-5I8	142.50	33.63	13.49	0.52	0.21
whole body, embryo E12.CNhs10587.857-27C9	121.70	11.17	14.76	0.80	0.00
whole body, embryo E13.CNhs10512.372-23H2	125.66	17.41	12.46	0.17	0.17
whole body, embryo E14.5.CNhs10578.420-27D2	92.62	13.61	8.51	0.24	0.49
whole body, embryo E14.CNhs10519.395-14B1	128.07	25.36	9.64	0.00	0.42
whole body, embryo E16.CNhs10514.453-14F2	113.25	19.12	10.48	0.18	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5	87.79	11.11	9.11	0.44	0.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5	88.18	11.74	7.01	0.62	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5	94.67	12.19	5.78	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5	85.16	14.40	7.58	1.01	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5	94.55	15.21	9.89	0.25	0.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5	84.32	14.34	6.04	0.19	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5	83.06	12.17	7.40	0.47	0.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5	80.22	12.10	8.32	0.26	0.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5	76.22	11.95	7.52	0.17	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5	63.82	12.86	5.24	0.95	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5	67.68	11.47	6.49	0.23	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5	70.03	12.73	5.59	0.00	0.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5	92.31	12.36	7.01	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5	86.11	14.13	8.54	0.15	0.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5	91.89	15.09	10.29	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5	89.63	16.51	8.70	0.18	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5	92.75	15.26	9.78	0.24	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5	81.54	11.92	8.58	0.29	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5	78.68	14.40	5.74	0.19	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5	77.76	13.12	5.58	0.42	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5	73.35	14.63	6.04	0.55	0.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5	92.34	12.89	5.00	0.26	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5	89.09	12.49	8.42	0.00	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5	60.04	10.10	3.93	0.00	0.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5	68.81	12.69	5.69	0.24	0.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5	76.05	12.41	5.22	0.49	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5	87.98	11.87	7.37	1.64	0.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5	69.72	9.45	7.75	0.15	0.00
whole body, embryo E17.5.CNhs10513.490-9F9	83.72	13.12	8.49	0.19	0.00
whole body, embryo E17.CNhs10517.475-3I5	71.45	11.99	7.49	1.00	0.00
whole body, embryo E18.CNhs10516.493-3B3	90.77	10.06	9.59	0.23	0.23
whole body, neonate N00.CNhs10525.657-19C2	70.48	11.60	4.51	0.21	0.00
whole body, neonate N01.CNhs10576.659-23C6	84.74	8.61	9.56	0.19	0.00
whole body, neonate N06.CNhs10515.692-21D1	84.93	13.01	10.81	0.00	0.00
whole body, neonate N10.CNhs10518.761-6B4	110.83	13.22	9.97	0.23	0.00

• Click each plot point to find sample in table

ENCODE TF ChIP-seq peak enrichment analysis Analyst: Erik Arner <br>Summary: For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><br><br>link to source dataset.<br>data

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No analysis results for this cluster

Details<b>Summary:</b>It includes sequences from the international sequence collaboration, Swiss-Prot, and RefSeq. The RefSeq subset of this file is also available as gene2refseq.<br><br>links to source dataset.<br>human <br>mouse

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GeneID:	18002
LocusTag:	-
chromosome:	14
map location:	14 C3, 14 20.5 cM, 14 C3;;14 20.5 cM
type of gene:	protein-coding
Symbol from nomenclature authority:	Nedd8
Full name from nomenclature authority:	neural precursor cell expressed, developmentally down-regulated gene 8
Nomenclature status:	O
Other designations:	NEDD-8, NEDD8, neddylin, neural precursor cell expressed developmentally down-regulated protein 8, ubiquitin-like protein Nedd8, NEDD-8;;NEDD8;;neddylin;;neural precursor cell expressed developmentally down-regulated protein 8;;ubiquitin-like protein Nedd8
Modification date:	18.11.2011