Personal tools

UBERON:0007914

From FANTOM5_SSTAR

Revision as of 17:08, 26 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:head or neck bone
Xrefs:
links:
MA:0000569

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0001474(bone element)



Children

is a:UBERON:0003457 (head bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007914 (head or neck bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81bp14@C17orf67
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81bp14@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6p11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6p13@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6p11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6p13@C17orf67
1.87e-86FFCP PHASE1:Mm9::chr9:42207777..42207789,-#_c7b014f591b3f452f653d0547dd682dfp7@Tecta
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_c7b014f591b3f452f653d0547dd682dfp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_c7b014f591b3f452f653d0547dd682dfp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_c7b014f591b3f452f653d0547dd682dfp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_c7b014f591b3f452f653d0547dd682dfp2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_c7b014f591b3f452f653d0547dd682dfp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_c7b014f591b3f452f653d0547dd682dfp4@Otogl
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_c7b014f591b3f452f653d0547dd682dfp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_c7b014f591b3f452f653d0547dd682dfp2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:3909310..3909321,+#_c7b014f591b3f452f653d0547dd682dfp@chr5:3909310..3909321, +
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_c7b014f591b3f452f653d0547dd682dfp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_c7b014f591b3f452f653d0547dd682dfp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_c7b014f591b3f452f653d0547dd682dfp@chr4:133802857..133802884, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_c7b014f591b3f452f653d0547dd682dfp2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_c7b014f591b3f452f653d0547dd682dfp@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_c7b014f591b3f452f653d0547dd682dfp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_c7b014f591b3f452f653d0547dd682dfp@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_c7b014f591b3f452f653d0547dd682dfp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:100724698..100724706, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_c7b014f591b3f452f653d0547dd682dfp1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_c7b014f591b3f452f653d0547dd682dfp@chr9:66860888..66860899, +
1.87e-86FFCP PHASE1:Mm9::chr8:13435173..13435186,+#_c7b014f591b3f452f653d0547dd682dfp6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_c7b014f591b3f452f653d0547dd682dfp2@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_c7b014f591b3f452f653d0547dd682dfp2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_c7b014f591b3f452f653d0547dd682dfp@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_c7b014f591b3f452f653d0547dd682dfp3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_c7b014f591b3f452f653d0547dd682dfp5@Tecta
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_c7b014f591b3f452f653d0547dd682dfp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_c7b014f591b3f452f653d0547dd682dfp2@Tecta
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_c7b014f591b3f452f653d0547dd682dfp@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_c7b014f591b3f452f653d0547dd682dfp9@Otof
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_c7b014f591b3f452f653d0547dd682dfp@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_c7b014f591b3f452f653d0547dd682dfp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_c7b014f591b3f452f653d0547dd682dfp@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_c7b014f591b3f452f653d0547dd682dfp1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_c7b014f591b3f452f653d0547dd682dfp@chr18:66033526..66033539, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_c7b014f591b3f452f653d0547dd682dfp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_c7b014f591b3f452f653d0547dd682dfp@chr13:37195838..37195870, -
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_c7b014f591b3f452f653d0547dd682dfp@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_c7b014f591b3f452f653d0547dd682dfp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_c7b014f591b3f452f653d0547dd682dfp@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_c7b014f591b3f452f653d0547dd682dfp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_c7b014f591b3f452f653d0547dd682dfp@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_c7b014f591b3f452f653d0547dd682dfp2@Otof
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_c7b014f591b3f452f653d0547dd682dfp3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_c7b014f591b3f452f653d0547dd682dfp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_c7b014f591b3f452f653d0547dd682dfp@chr9:42206784..42206793, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_c7b014f591b3f452f653d0547dd682dfp3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_c7b014f591b3f452f653d0547dd682dfp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_c7b014f591b3f452f653d0547dd682dfp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_c7b014f591b3f452f653d0547dd682dfp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_c7b014f591b3f452f653d0547dd682dfp@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_c7b014f591b3f452f653d0547dd682dfp2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_c7b014f591b3f452f653d0547dd682dfp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_c7b014f591b3f452f653d0547dd682dfp@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556972..115556979,+#_c7b014f591b3f452f653d0547dd682dfp3@Kncn
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_c7b014f591b3f452f653d0547dd682dfp1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_c7b014f591b3f452f653d0547dd682dfp@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_c7b014f591b3f452f653d0547dd682dfp2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_c7b014f591b3f452f653d0547dd682dfp@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_c7b014f591b3f452f653d0547dd682dfp@chr4:154208086..154208123, +
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_c7b014f591b3f452f653d0547dd682dfp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_c7b014f591b3f452f653d0547dd682dfp@chr17:27252925..27252939, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_c7b014f591b3f452f653d0547dd682dfp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_c7b014f591b3f452f653d0547dd682dfp4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_c7b014f591b3f452f653d0547dd682dfp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_c7b014f591b3f452f653d0547dd682dfp@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_c7b014f591b3f452f653d0547dd682dfp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_c7b014f591b3f452f653d0547dd682dfp@chr14:20649897..20649907, +
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_c7b014f591b3f452f653d0547dd682dfp@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_c7b014f591b3f452f653d0547dd682dfp@chr18:81327205..81327211, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_c7b014f591b3f452f653d0547dd682dfp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_c7b014f591b3f452f653d0547dd682dfp@chr4:133802857..133802884, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0007914&oldid=1836300"